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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCATGGGATATTGTGAGAGATGCTTTTAATTCGCTTGAAGATGTGGACATGCTTGAAGTAGCTAATTTATCTTTAGATGATCGAGAGTTGGAGGCTGAAATTATT mRNA sequence ATGTCATGGGATATTGTGAGAGATGCTTTTAATTCGCTTGAAGATGTGGACATGCTTGAAGTAGCTAATTTATCTTTAGATGATCGAGAGTTGGAGGCTGAAATTATT Coding sequence (CDS) ATGTCATGGGATATTGTGAGAGATGCTTTTAATTCGCTTGAAGATGTGGACATGCTTGAAGTAGCTAATTTATCTTTAGATGATCGAGAGTTGGAGGCTGAAATTATT Protein sequence MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII
Homology
BLAST of MELO3C004013 vs. NCBI nr
Match: KAA0055555.1 (hypothetical protein E6C27_scaffold222G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query: 1 MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 37
MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII
Sbjct: 32 MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 67
BLAST of MELO3C004013 vs. NCBI nr
Match: TYK01366.1 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 69.3 bits (168), Expect = 7.6e-09 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0
Query: 2 SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 37
SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII
Sbjct: 33 SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 67
BLAST of MELO3C004013 vs. NCBI nr
Match: XP_031743157.1 (uncharacterized protein LOC116404561 [Cucumis sativus]) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-04 Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0
Query: 2 SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEI 36
+WDI DA +SLEDVDMLEVANLSLDD ELEAEI
Sbjct: 520 AWDIAGDASDSLEDVDMLEVANLSLDDPELEAEI 553
BLAST of MELO3C004013 vs. ExPASy TrEMBL
Match: A0A5A7UPP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00320 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 9.7e-10 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query: 1 MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 37
MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII
Sbjct: 32 MSWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 67
BLAST of MELO3C004013 vs. ExPASy TrEMBL
Match: A0A5D3BT24 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00520 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.7e-09 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0
Query: 2 SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 37
SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII
Sbjct: 33 SWDIVRDAFNSLEDVDMLEVANLSLDDRELEAEII 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0055555.1 | 2.0e-09 | 100.00 | hypothetical protein E6C27_scaffold222G00320 [Cucumis melo var. makuwa] | [more] |
| TYK01366.1 | 7.6e-09 | 100.00 | DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein [Cucumi... | [more] |
| XP_031743157.1 | 1.5e-04 | 82.35 | uncharacterized protein LOC116404561 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UPP9 | 9.7e-10 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BT24 | 3.7e-09 | 100.00 | DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cucu... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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