MELO3C003969 (gene) Melon (DHL92) v4

Overview
NameMELO3C003969
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionEnvelope-like protein
Locationchr05: 21004703 .. 21005011 (-)
RNA-Seq ExpressionMELO3C003969
SyntenyMELO3C003969
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCGGACAAGCAAGATGATGTTCCTTTGGCTAAACTATTGAAGAAAGGTTTTAGTTCAAATGTTGCTCATGCTCAATCTGCTGATCCTATCATACCAGCTCGTTCTCATGAGAGTTCTTCTTCTGAAGATGTTTTTATCCCTACACTTGGTTTTCACCATGCGTCCGATCAAGAACCTGGTCCCTTGCAGCATTCACCACTAGTTAGGTTATCATTTCTGGTCGATGTTGCTCCTAATCTACATTCAGAGGCTGCAGCTGTTATGAGGAAAGGAATGATGTTCCTACTGATGAGACTTTATTGA

mRNA sequence

ATGGATTCGGACAAGCAAGATGATGTTCCTTTGGCTAAACTATTGAAGAAAGGTTTTAGTTCAAATGTTGCTCATGCTCAATCTGCTGATCCTATCATACCAGCTCGTTCTCATGAGAGTTCTTCTTCTGAAGATGTTTTTATCCCTACACTTGGTTTTCACCATGCGTCCGATCAAGAACCTGGTCCCTTGCAGCATTCACCACTAGTTAGGTTATCATTTCTGGTCGATGTTGCTCCTAATCTACATTCAGAGGCTGCAGCTGTTATGAGGAAAGGAATGATGTTCCTACTGATGAGACTTTATTGA

Coding sequence (CDS)

ATGGATTCGGACAAGCAAGATGATGTTCCTTTGGCTAAACTATTGAAGAAAGGTTTTAGTTCAAATGTTGCTCATGCTCAATCTGCTGATCCTATCATACCAGCTCGTTCTCATGAGAGTTCTTCTTCTGAAGATGTTTTTATCCCTACACTTGGTTTTCACCATGCGTCCGATCAAGAACCTGGTCCCTTGCAGCATTCACCACTAGTTAGGTTATCATTTCTGGTCGATGTTGCTCCTAATCTACATTCAGAGGCTGCAGCTGTTATGAGGAAAGGAATGATGTTCCTACTGATGAGACTTTATTGA

Protein sequence

MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQEPGPLQHSPLVRLSFLVDVAPNLHSEAAAVMRKGMMFLLMRLY
Homology
BLAST of MELO3C003969 vs. NCBI nr
Match: KAA0060145.1 (uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK19510.1 uncharacterized protein E5676_scaffold1836G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 6.4e-21
Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDSDKQD+VPL +LLKKGF+SNVA A+SADP I ARS ESSS EDVF+PT   HHAS++E
Sbjct: 64  MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 123

Query: 61  PGPLQHSPLVRLSFLVDV-APNLHSEAAAV 90
           PGP QHS   R S   DV  PN HS+ A++
Sbjct: 124 PGPSQHSYSDRSSISNDVPTPNRHSKPASL 153

BLAST of MELO3C003969 vs. NCBI nr
Match: XP_008450465.1 (PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 6.4e-21
Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0

Query: 1  MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
          MDSDKQD+VPL +LLKKGF+SNVA A+SADP I ARS ESSS EDVF+PT   HHAS++E
Sbjct: 1  MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60

Query: 61 PGPLQHSPLVRLSFLVDV-APNLHSEAAAV 90
          PGP QHS   R S   DV  PN HS+ A++
Sbjct: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASL 90

BLAST of MELO3C003969 vs. NCBI nr
Match: TYK08882.1 (uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-20
Identity = 54/71 (76.06%), Postives = 60/71 (84.51%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDSD+QDDVPLA+LLKKGF  NVA  +S +PII ARS ESSSSEDVFIPT G +HASDQE
Sbjct: 160 MDSDEQDDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219

Query: 61  PGPLQHSPLVR 72
           PGP QHSP +R
Sbjct: 220 PGPSQHSPPIR 230

BLAST of MELO3C003969 vs. NCBI nr
Match: KAA0031748.1 (uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDSD+Q DVPLA+LLKKGF  NVA  +S +PII ARS ESSSSEDVFIPT G +HASDQE
Sbjct: 160 MDSDEQYDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219

Query: 61  PGPLQHSPLVR 72
           P P QHSP +R
Sbjct: 220 PSPSQHSPPIR 230

BLAST of MELO3C003969 vs. NCBI nr
Match: KAA0054498.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDS++QD+V LA+LLKK F SNVA A+SADP+I A S ESSSS++VFIPT GFHH + +E
Sbjct: 67  MDSNEQDNVLLARLLKKDFVSNVASAKSADPVILAHSQESSSSKEVFIPTPGFHHVASEE 126

Query: 61  PGPLQHSPLVRLSFLVDV-APNLHSEAAAV 90
            GP +HSPLVR     DV AP+ HS  A V
Sbjct: 127 LGPSRHSPLVRSLVSNDVTAPHPHSTPAPV 156

BLAST of MELO3C003969 vs. ExPASy TrEMBL
Match: A0A5A7V2P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1836G00020 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.1e-21
Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDSDKQD+VPL +LLKKGF+SNVA A+SADP I ARS ESSS EDVF+PT   HHAS++E
Sbjct: 64  MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 123

Query: 61  PGPLQHSPLVRLSFLVDV-APNLHSEAAAV 90
           PGP QHS   R S   DV  PN HS+ A++
Sbjct: 124 PGPSQHSYSDRSSISNDVPTPNRHSKPASL 153

BLAST of MELO3C003969 vs. ExPASy TrEMBL
Match: A0A1S3BQA7 (uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.1e-21
Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0

Query: 1  MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
          MDSDKQD+VPL +LLKKGF+SNVA A+SADP I ARS ESSS EDVF+PT   HHAS++E
Sbjct: 1  MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60

Query: 61 PGPLQHSPLVRLSFLVDV-APNLHSEAAAV 90
          PGP QHS   R S   DV  PN HS+ A++
Sbjct: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASL 90

BLAST of MELO3C003969 vs. ExPASy TrEMBL
Match: A0A5D3CC65 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00040 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 54/71 (76.06%), Postives = 60/71 (84.51%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDSD+QDDVPLA+LLKKGF  NVA  +S +PII ARS ESSSSEDVFIPT G +HASDQE
Sbjct: 160 MDSDEQDDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219

Query: 61  PGPLQHSPLVR 72
           PGP QHSP +R
Sbjct: 220 PGPSQHSPPIR 230

BLAST of MELO3C003969 vs. ExPASy TrEMBL
Match: A0A5A7SM94 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00110 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.5e-19
Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDSD+Q DVPLA+LLKKGF  NVA  +S +PII ARS ESSSSEDVFIPT G +HASDQE
Sbjct: 160 MDSDEQYDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219

Query: 61  PGPLQHSPLVR 72
           P P QHSP +R
Sbjct: 220 PSPSQHSPPIR 230

BLAST of MELO3C003969 vs. ExPASy TrEMBL
Match: A0A5A7UHP7 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002770 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-18
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0

Query: 1   MDSDKQDDVPLAKLLKKGFSSNVAHAQSADPIIPARSHESSSSEDVFIPTLGFHHASDQE 60
           MDS++QD+V LA+LLKK F SNVA A+SADP+I A S ESSSS++VFIPT GFHH + +E
Sbjct: 67  MDSNEQDNVLLARLLKKDFVSNVASAKSADPVILAHSQESSSSKEVFIPTPGFHHVASEE 126

Query: 61  PGPLQHSPLVRLSFLVDV-APNLHSEAAAV 90
            GP +HSPLVR     DV AP+ HS  A V
Sbjct: 127 LGPSRHSPLVRSLVSNDVTAPHPHSTPAPV 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060145.16.4e-2165.56uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK1... [more]
XP_008450465.16.4e-2165.56PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo][more]
TYK08882.13.2e-2076.06uncharacterized protein E5676_scaffold1411G00040 [Cucumis melo var. makuwa][more]
KAA0031748.11.8e-1873.24uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa][more]
KAA0054498.13.9e-1862.22envelope-like protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V2P03.1e-2165.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BQA73.1e-2165.56uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=... [more]
A0A5D3CC651.5e-2076.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SM948.5e-1973.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UHP71.9e-1862.22Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003969.1MELO3C003969.1mRNA