MELO3C003704 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003704
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Ubiquitin-like domain-containing protein
Location	chr04: 3296225 .. 3299686 (+)
RNA-Seq Expression	MELO3C003704
Synteny	MELO3C003704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATGTTAAATAATTTAAGTTTATTTAATTGAGAATAAAATGAAAACAAGAAGAAACGACATCGTTTTAGAAGGAAAGGCAGTTGAAAACGGTTGAGAAACCGTTAGCGCCACGAAACCGAAGTCGCATAACTAACCATCTTCACCCTGACCGTACCAAAAAGAAGAGAAAAGAAAAGAAGAGAAAAGAAAGGAAATGGAAATGGAAATTAAATAAGAGCTAAAGAAATTTGATGAGGTTCTCGGGAATTGCCTCCGACACAAGCTCCGAATGCCACTCTTTCTTCAAAAAAGCCAAACCCTAAGTCTCTCCTCCTTCAACCTCTCTCTCATCATCCCCATGCCGTGTTCTTCTTTCCTAAGCATCTCTCTCCCTTTTTCCCTTTTCTTCTTCACATTTTAAGCAACCCCCCCATATTATATTAATATATTTCATCCCCTTTTCCCATTCTCCCCTCTCATCCCCTAATTGATTCCCATTCCATGGCTGTCGACGGCGTTTGTACACTTGACGTTGTTGACTTTCCTCCGCCGACGTCAACGACGACGGCCGAGAAGCATCGTAGATCCTTCTCCTTGCTTTCATCTCCTTTGATGATTGTTGGTCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCAACCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTGTTTCGGTAATTTCTGTTTCTGTGGCTGTATTTTTTTTTTTTTTTAATAATGTGGATTAAATGTAATCCGATTTGGGGTAATTATTTGTGGTAGTTTTTGATGATGCTGGAGAAATGGAGATTATTTTCTGCTCTTGAGTTTTGTTTGGTTTTATATAGGGCAGAGATATTGACGGTTTTTGAAATGGTTTTATTTTGATCACAGAAAGTGAGAAAACTGGTTTCTTAAATTTGAAGAATAAGAATGTCTTTGTTTGCGAACTCTTTTAATATAGGAGGACTTCAATGAATTGAGATGTTTGACACAGATATTCAAGTTAGGAGATCGGCTACTGTAGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGAATGGACCGGGAAAGATTTCATGGTTGGTACATTTAATTATTTTACCATTTAATTTTAAGAATGAGATTGATTACTCTTATCTGCTTTTAGATCCTATTATGATTTTCTTTATTTATCAATGCTGGGCCACAACTATGGACCATATTTTGATGATATGTTGAAAGTTTGAAGGACATGCTTAATAGAATAGAACTACTTATCTGCTCTAAATTATCAACTTCCCTGGGACTTTGTCTACCTTATTCTTAACTTAACTAGTTATTTTAATCTGGATATCCTTTCACTTTGACACAAAAGTTCATAGAAGAGTACTTCTCAATTGAAATGTTTCCTGTTCTTGTTTGATTCATGAAGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGATGGTCAAAAGTTAATTGATGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGGTATGTAGTTTGTTGTATAGTAGTAGTTTATGTTGTCTTTTCAAGTTTCGTTAAATGAATAATTGCTTTTCGTTGCTTAGACTTGATTCTTGATGCATTATTTGTGAATCTATTTACTGTCAGGAATGTGTTTCCAGGATGTTAATGAAATATGAAAAGGAAGAGTATAGAATTACACAACTTTAAGCTTATGTTAACTGGATTTCCTCGTTTTAACATGTTCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAAGAAACGTGAAGTTTCCTCAAAACTGATCAGTAGGTAAGACTCTTACCTCTTAAATAGTAGTCCTTGATGGGAAAAACTGTATTGACGCAAAAATAGCCAGGGACTTTGGGCATTAAAAAGAATTTCAAAAACTTGAGACGACAAAAAAGCGTCCATCCTGAAAGTGGTAAAATATACTGTTAGGAACCTTGGGGATTGTATTGGACTAAGAAATGTTAAATAATATAAGATTTTTATAGAAGTTTTCTTGTTATTCAATAAGTCTCTTGAAAGATAATTTGGGCTATTGGATCTTACTACTTTTCCAAGATCAATCGGTGACTATTAGACCTTCTCAATTTGTAACTATTAGATCGTCCACCTTTTTTAAGGTGAATTTCGGGTCATTGGTTTTGCTTGATGGCTAAGTTTCTTTGTGCTATAAATACCGGTACACATGATTGCCAAATCGTCTCAAAATATATATTATCATCCCGAAATATATGTAATGATCACCTATAGGTGCTTGAGGTTTTCCCCTTATTTCGTTCATTCAATGAACTGTTTCTTCTATAGAAAAACCACCAAAAATCTCAAATCAAGTATGTTATTCCTCTATAAGAAAGAAAGGTTGTAACTTCTGTTTTAGTGTTTTGTATAATGCAATTCATCTACTTTTCCCGTAATTTTTACCCTAATTTGTTTAGGAGTTGCCACGTAAAACCATTGTGTTCTCTCCATTTTTCTTTATTAGTATTCTTAACCTATTTTAGTTGTGATCTTACTCTATTCAGTCACAATCCTTTTCACAACAAGAAATTCATATAAGTTATCCATTCCTTGAATGATATATCAATCTAATCGATGTACCTTTTTTACATTGCTATCGTCCGATCTCTTATTTCAAATTACCAATCTGTTCTGCTTACTATAGGATTCTAACTTCTCAGGATATCATCTCGATCAAAAAGCTTCAAGCAAAATGATCAGAAAGATATGGAAAGATACAACTACAAATACAATGACATAGAAAGTGGAAGGTGTCAACATAACGGCAACGATGATCTCTTCGTGAACCAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCTGCAGGAAAGATGAGCATCAAGAGCCTGGTACGTCCATCGGTAACTCGCCCTAGCCTGGTGGGTGGTTTAAAGAATTTAATACAATTATGCCGCGAAAAACGACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGAGTAGTTTAGGAATGATTGAGTTAGTCTATACTCTTATAATAAATATATATGCATTCTTCCTTCATAATCCTTTATATATTAAATAATAAGGTGTTAGACTACCAGAATTCATAATCGTAGTTAGTTGGTGATTATTGTTTTTGTGGTTAATGACAATAATGGTAGGTAATTACGAAATTATACATTGATATAGAAGCTAAGTTGTATCAAAATACCTTACCATTCCTATAGAGAAATCAACTACTTGTACCTTACGGACATAACTCTATATAGTAATTTTGTCTTTCCATTTGTCATTTTCAATCCCTCACTTTCATTTGGCCTTGTTTTTTAGAATTAGTTTGATGGCTGCAAAAATTCCAAGTAATGCCTTTATTTGTTTATTTATTTC

mRNA sequence

AAAAAATGTTAAATAATTTAAGTTTATTTAATTGAGAATAAAATGAAAACAAGAAGAAACGACATCGTTTTAGAAGGAAAGGCAGTTGAAAACGGTTGAGAAACCGTTAGCGCCACGAAACCGAAGTCGCATAACTAACCATCTTCACCCTGACCGTACCAAAAAGAAGAGAAAAGAAAAGAAGAGAAAAGAAAGGAAATGGAAATGGAAATTAAATAAGAGCTAAAGAAATTTGATGAGGTTCTCGGGAATTGCCTCCGACACAAGCTCCGAATGCCACTCTTTCTTCAAAAAAGCCAAACCCTAAGTCTCTCCTCCTTCAACCTCTCTCTCATCATCCCCATGCCGTGTTCTTCTTTCCTAAGCATCTCTCTCCCTTTTTCCCTTTTCTTCTTCACATTTTAAGCAACCCCCCCATATTATATTAATATATTTCATCCCCTTTTCCCATTCTCCCCTCTCATCCCCTAATTGATTCCCATTCCATGGCTGTCGACGGCGTTTGTACACTTGACGTTGTTGACTTTCCTCCGCCGACGTCAACGACGACGGCCGAGAAGCATCGTAGATCCTTCTCCTTGCTTTCATCTCCTTTGATGATTGTTGGTCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCAACCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAGGAGATCGGCTACTGTAGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGAATGGACCGGGAAAGATTTCATGGTTGTTAATTGATGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAAGAAACGTGAAGTTTCCTCAAAACTGATCAGTAGGATATCATCTCGATCAAAAAGCTTCAAGCAAAATGATCAGAAAGATATGGAAAGATACAACTACAAATACAATGACATAGAAAGTGGAAGGTGTCAACATAACGGCAACGATGATCTCTTCGTGAACCAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCTGCAGGAAAGATGAGCATCAAGAGCCTGGTACGTCCATCGGTAACTCGCCCTAGCCTGGTGGGTGGTTTAAAGAATTTAATACAATTATGCCGCGAAAAACGACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGAGTAGTTTAGGAATGATTGAGTTAGTCTATACTCTTATAATAAATATATATGCATTCTTCCTTCATAATCCTTTATATATTAAATAATAAGGTGTTAGACTACCAGAATTCATAATCGTAGTTAGTTGGTGATTATTGTTTTTGTGGTTAATGACAATAATGGTAGGTAATTACGAAATTATACATTGATATAGAAGCTAAGTTGTATCAAAATACCTTACCATTCCTATAGAGAAATCAACTACTTGTACCTTACGGACATAACTCTATATAGTAATTTTGTCTTTCCATTTGTCATTTTCAATCCCTCACTTTCATTTGGCCTTGTTTTTTAGAATTAGTTTGATGGCTGCAAAAATTCCAAGTAATGCCTTTATTTGTTTATTTATTTC

Coding sequence (CDS)

ATGGCTGTCGACGGCGTTTGTACACTTGACGTTGTTGACTTTCCTCCGCCGACGTCAACGACGACGGCCGAGAAGCATCGTAGATCCTTCTCCTTGCTTTCATCTCCTTTGATGATTGTTGGTCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCAACCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAGGAGATCGGCTACTGTAGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGAATGGACCGGGAAAGATTTCATGGTTGTTAATTGATGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAAGAAACGTGAAGTTTCCTCAAAACTGATCAGTAGGATATCATCTCGATCAAAAAGCTTCAAGCAAAATGATCAGAAAGATATGGAAAGATACAACTACAAATACAATGACATAGAAAGTGGAAGGTGTCAACATAACGGCAACGATGATCTCTTCGTGAACCAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCTGCAGGAAAGATGAGCATCAAGAGCCTGGTACGTCCATCGGTAACTCGCCCTAGCCTGGTGGGTGGTTTAAAGAATTTAATACAATTATGCCGCGAAAAACGACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGA

Protein sequence

MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLLIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQKDMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV

Homology

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BLAST of MELO3C003704 vs. NCBI nr
Match: XP_008466420.1 (PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-140
Identity = 262/276 (94.93%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL              LI
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of MELO3C003704 vs. NCBI nr
Match: KAA0038816.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 508.1 bits (1307), Expect = 4.6e-140
Identity = 261/276 (94.57%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL              LI
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERYNYKYNDIESGRCQHNGN+DLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNNDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of MELO3C003704 vs. NCBI nr
Match: XP_004136480.1 (uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical protein Csa_001701 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 4.2e-125
Identity = 245/279 (87.81%), Postives = 251/279 (89.96%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWL              L+
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNG--NDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  N+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of MELO3C003704 vs. NCBI nr
Match: XP_038899214.1 (uncharacterized protein LOC120086568 [Benincasa hispida])

HSP 1 Score: 434.5 bits (1116), Expect = 6.5e-118
Identity = 229/279 (82.08%), Postives = 244/279 (87.46%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDF--PPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60
           MA+DGVCTLDVV+F  PPP   TT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM
Sbjct: 1   MAIDGVCTLDVVEFPPPPPPPPTTVEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL-------------- 120
           LSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQNGPGKISWL              
Sbjct: 61  LSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWHFCLCYAGQK 120

Query: 121 LIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQND 180
           L+DDADYIA+FGIKDGDQLQFVRHVTTGYN IRKQSKK  VSSKL+SRIS RSK+++QND
Sbjct: 121 LVDDADYIANFGIKDGDQLQFVRHVTTGYNAIRKQSKKCVVSSKLLSRISYRSKNYEQND 180

Query: 181 QKDMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           Q+DMERYN  YNDIESGR QH+GN++LF+N +PKMVVFLGGWFSHTKLASAGK  I SLV
Sbjct: 181 QEDMERYN--YNDIESGRFQHHGNNELFMNHEPKMVVFLGGWFSHTKLASAGKTRINSLV 240

Query: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           RPS TRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of MELO3C003704 vs. NCBI nr
Match: XP_023535364.1 (uncharacterized protein LOC111796829 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.9 bits (995), Expect = 7.0e-104
Identity = 208/273 (76.19%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG   LD  DFPPP   TT EK+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGFGKLDASDFPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQNGPGKISWL              L+
Sbjct: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQSKK  VSSKL+SRISSRSKS+KQN+++
Sbjct: 121 DDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNEKE 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERY   YND ESGR QH+GN     N+P++V+FLGGWFSH K AS GK SI SL RPS
Sbjct: 181 DMERY---YNDAESGRFQHHGN-----NEPRVVLFLGGWFSHNKQASTGKRSINSLARPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSI 260
            +RPSLV G KNLIQLCREKRHYEKVNK KRSI
Sbjct: 241 GSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI 263

[Close]

BLAST of MELO3C003704 vs. ExPASy TrEMBL
Match: A0A5D3E6G8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007520 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 5.9e-141
Identity = 262/276 (94.93%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL              LI
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of MELO3C003704 vs. ExPASy TrEMBL
Match: A0A1S3CR65 (uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 5.9e-141
Identity = 262/276 (94.93%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL              LI
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of MELO3C003704 vs. ExPASy TrEMBL
Match: A0A5A7T9I3 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003750 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140
Identity = 261/276 (94.57%), Postives = 262/276 (94.93%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL              LI
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERYNYKYNDIESGRCQHNGN+DLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNNDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of MELO3C003704 vs. ExPASy TrEMBL
Match: A0A0A0LH97 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877630 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.0e-125
Identity = 245/279 (87.81%), Postives = 251/279 (89.96%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWL              L+
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYKYNDIESGRCQHNG--NDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  N+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 263
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of MELO3C003704 vs. ExPASy TrEMBL
Match: A0A6J1FBK4 (uncharacterized protein LOC111442589 OS=Cucurbita moschata OX=3662 GN=LOC111442589 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.4e-104
Identity = 209/273 (76.56%), Postives = 224/273 (82.05%), Query Frame = 0


Query: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG   LD    PPP   TT EK+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWL--------------LI 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQNGPGKISWL              L+
Sbjct: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180
           DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQSKK  VSSKL+SRISSRSKS+KQND++
Sbjct: 121 DDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKE 180

Query: 181 DMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWFSHTKLASAGKMSIKSLVRPS 240
           DMERY   YND ESGR QH+GN     N+PK+V+FLGGWFSHTK AS GK SI SL RPS
Sbjct: 181 DMERY---YNDAESGRFQHHGN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPS 240

Query: 241 VTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSI 260
            +RPSLV G KNLIQLCREKRHYEKVNK KRSI
Sbjct: 241 GSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI 263

[Close]

BLAST of MELO3C003704 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 6.3e-26
Identity = 70/161 (43.48%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 27  RRSFSLLSSPLMIV-GLSRKNVL-YRQLPHQPLMLSVLKLDGSCFDIQVRRSATVAELKG 86
           RRS +   SPL ++ GL R+    Y Q+P +P+ L+VLKLDGS F IQV ++ATV ELK 
Sbjct: 6   RRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELKM 65

Query: 87  AVELVFSHMPQNGPGKISW--------------LLIDDADYIASFGIKDGDQLQFVRHVT 146
           AVE  FSH+P +GPGKISW               LI++++Y+  FGIKDGDQL+F+RH++
Sbjct: 66  AVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHIS 125

Query: 147 T-GYNVIRKQSKKREVSS-KLISRISSRSKSFKQNDQKDME 170
                +++ +SK   VSS K +   S+  ++ K+N  +++E
Sbjct: 126 NYCMLMVKHKSKTPRVSSFKQLKLFSTTPETRKKNVIREVE 166

[Close]

BLAST of MELO3C003704 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20
Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 44  RKNVLYRQLPHQPLMLSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISW 103
           R+   Y +LP++P+ LSVLKLDGS FD+ V  SATV +LK A+E  FSH+P+ GP KISW
Sbjct: 6   RRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISW 65

Query: 104 --------------LLIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKL 163
                          LI D D I ++G+KDGD+++F  HV+   N +  +   R+   K 
Sbjct: 66  SHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSG--NAVLSKGYSRKSKQKN 125

Query: 164 ISRISSRSKSFKQNDQKDMERYNYKYNDIESGRCQHNGNDDL 192
           + R+  +      N    +E  +  ++D+E G      +DD+
Sbjct: 126 LERVLPKDGDEVLN---RIEEIDDSWDDLERGGLVMYKDDDM 162

[Close]

BLAST of MELO3C003704 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.8e-20
Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 52  LPHQPLMLSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISW-------- 111
           +P +P+ L+VLKLDGS F   V ++ATV ELK AVE  FSH+P +GPGKISW        
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 60

Query: 112 ------LLIDDADYIASFGIKDGDQLQFVRHVTT-GYNVIRKQSKKREVSS-KLISRISS 170
                  LI++++Y+  FGIKDGDQL+F+RH++     +++ +SK   VSS K +   S+
Sbjct: 61  LSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFST 120

[Close]

BLAST of MELO3C003704 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-17
Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 42  LSRKNVLYRQLPHQ-PLMLSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGK 101
           +S +   Y +LP Q  + LSV+KL+GS FD++V +  +VAELK AVE VF+  P  G G 
Sbjct: 37  ISGRRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGM 96

Query: 102 ISW--------------LLIDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVS 161
           ISW               L++D   I   G+ DGDQL FVRH++  ++ + K+SK     
Sbjct: 97  ISWSHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNKRSKSPSCK 156

Query: 162 SKLISRISSRSKSFKQNDQKDMERYNYKYNDIESGRCQHNGNDDLFVNQPKMVVFLGGWF 209
             L   +SS     +  +Q      N    D  + +C     D+L   + ++V  + GW 
Sbjct: 157 RYLELDVSSIVNEIQIQNQ------NQNGVDDVAEKCYPGAQDELPAAESRLVNLIKGWL 212

[Close]

BLAST of MELO3C003704 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 29/89 (32.58%), Postives = 44/89 (49.44%), Query Frame = 0


Query: 57  LMLSVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPG--KISW----------- 116
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW           
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 117 ---LLIDDADYIASFGIKDGDQLQFVRHV 130
               L+DD   +   GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

The following BLAST results are available for this feature:

BLAST of MELO3C003704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466420.1	1.2e-140	94.93	PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U...	[more]
KAA0038816.1	4.6e-140	94.57	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. m...	[more]
XP_004136480.1	4.2e-125	87.81	uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical ...	[more]
XP_038899214.1	6.5e-118	82.08	uncharacterized protein LOC120086568 [Benincasa hispida]	[more]
XP_023535364.1	7.0e-104	76.19	uncharacterized protein LOC111796829 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C003704 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C003704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6G8	5.9e-141	94.93	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A1S3CR65	5.9e-141	94.93	uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=...	[more]
A0A5A7T9I3	2.3e-140	94.57	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A0A0LH97	2.0e-125	87.81	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877...	[more]
A0A6J1FBK4	4.4e-104	76.56	uncharacterized protein LOC111442589 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]

BLAST of MELO3C003704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32270.1	6.3e-26	43.48	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	1.0e-20	36.42	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	8.8e-20	42.54	Ubiquitin-like superfamily protein	[more]
AT1G80060.1	9.1e-17	32.42	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	1.0e-04	32.58	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 59..103 e-value: 4.2E-7 score: 29.9
None	No IPR available	GENE3D	3.10.20.90		coord: 53..135 e-value: 1.5E-18 score: 68.4
None	No IPR available	PANTHER	PTHR14942:SF2	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 19..253
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 19..253
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 57..132 score: 8.589605
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 53..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003704.1	MELO3C003704.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
molecular_function	GO:0005515	protein binding