MELO3C003677.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C003677.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	V-type proton ATPase subunit c
Location	chr04: 3091070 .. 3093050 (+)
RNA-Seq Expression	MELO3C003677.jh1
Synteny	MELO3C003677.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGAAATCATGAATATAAATAGAAACTATTATTAAAGAATCCAAGGAGAGAGATAAGAAAAAGGTATCAGTTTTTAAAACACGAACCTAACCCCACAACGAAGAACGAATCACGTCGTCGTCTGGTAGCACAAGAATGAGAATCACAAACCCAAAGTCGAAACCACAAAATTCCCTTCCCACCACCACCACCACCACCACCACCACCACAACCAACAATCAACAATGGCGGCATCATCTCTAAGTTCTTGGTCCCACGCACTCGTCAGAATCTCCCCCTACACCTTCTCCGCCGTCGGCATTGCCATTTCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGTTTTCTTCTTCAACCTCTTTTCTCTTTTTCTTTCTTTCTTTTTTTCTTTTTTCCATTTGTAGCCTTACTCTCACTTCAACTTCTTCCCATTCATGCACTTTCTATCTCTTATTCTGGAATGTTGTTATGTTATCTCAGGGGAATCTACATAACCGGAAGTAGTCTGATCGGTGCTGCAATTAAAGCTCCACGTATTACCTCGAAAAATTTAATTAGGTAACAAAAATCTCAATCCCGAGTTTATATTTCCTTATTGGATGTACGTGGAGTTTGATTGAGTTTAAGCTAATTGTAATTGCTGAGTTCTGATTTCACTCTTCGTAGTGTTGTGATTTGACTTGTTCCGGGAAGATTGATCAACTGAAAATAGGATGAAACTTTCTGTTGTTTTATGATGTCTGATTGATTGATCCATAGTTGTTTAAAGCTTAGATCGTACAAGTATCAGGAGATTATACTGTTTAGGCTGTAGAATTTGGACAGAATTCAAATTCTTATGCTTTTGAATCTCAAATTTCTTTTCCATGGTTGGGCTTGTTATGATATTATCATTTGTTGATTCGAACGGTGCTTTCACAGTGATTCCTACTATTCAACCTGTGCAATATGTTAAATGTCTTTGCCATCTATAGTGTTAACAAGTATCTAGTATAGGTCATGTTAAATATCTTTGTCGTCTCTGTAGTGTTAACAAGTATCAAGTATCTAGAGGTGGTTTAGAAGGTCGTGAGGTTTGATGTGTCTTTCTGCTCGTCAATCACTAGACCTTTGTAATTATGATATTGGTTTTGTTTGAGGATTTCAGTCTTTTGTAATTAAAGTCAGAATCTTCATTTTCTTTTTCAATGAAACCTGATTATTTGAACCCACCCTCCAGCAAAAAAAAGAAGTGTGGTGATTAATATGAAGTTTGGACTGTCTTAATGAATGATTCTTTTTCTTTTTTCTTTCAGTGTAATTTTCTGTGAAGCTGTGGCTATATATGGTGTCATTGTGGCCATCATTTTACAAACAAAACTGGAGAGTGTTTCTGCATCTCAAATTTTTACTCCCGAGTCTCTAACAGCAGGATATTCAATTTTTGCCTCTGGGATTATTGTCGGCTTTGCCAACTTGTTTTGCGGGTTTGATTCTTCATCTTTAAACCTTTCCTTTTTCTTTAGTAGAGTGAAAGAAGAAAAACCCATCAACTGAAAATTTTTAACTGGGAGGTATGGTTTGTTTGTATAGGTTATGTGTAGGGATTATTGGAAGCAGCTGTGCATTATCTGATGCCCAAAACTCATCTCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGATTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTGCAAAGCCAATTTAATTTTGCTAATTGCTTCTGAACTTGAGGATTTTTGGTTCACTTTCTAGAGAGTTATGAAAAGTTATTGCCTTTGTTTTTTCCAATAGACTGTATATGTAAAAGCTTGGTTGTGATAAACCATGTAAGAACTTGAAAAGTGTTTGGTGTCCTTTTTTTGGTCTTGGACTCCCTAGGATGCCTAATGGTATGGCCTTGGCATGCATGTATATGTAAAAGCAGTGGAAAATGAAATTTGAACTGCTAGAATAATATCAATATACTCGGTGAAGGCTCCACTAACTGTGAAGCCCTATTTCCTTTATACCACCGAGAATATGATTGTGTGAGTCTAGTTCAACAATAATTGCTATGTATTATTTTCATTGAAGTTAGATGTTTGACTCTCTATACAGATTGTTGTACTAAAATAATGAGATTGACAGACAAAGCATGTTAGTTTCAATATCCCATTGTTAATACATACCTGCACAAGGGGTGTCTAAAAAACTCAATTACTATATATATTCAACCTAGTGTTTAGAAAAACCTTCCCGAATGGTCTCGACATAGCTCTGACACCTCACCTCAAAAAGATGAGGGTCACAAAATAAGGTGTGCTATGGCTGGATGCGCCCTTGGTAAAGCCATAAAGGCCTACAGCCTTGCAACTTCTTAA

mRNA sequence

ACTGAAATCATGAATATAAATAGAAACTATTATTAAAGAATCCAAGGAGAGAGATAAGAAAAAGGTATCAGTTTTTAAAACACGAACCTAACCCCACAACGAAGAACGAATCACGTCGTCGTCTGGTAGCACAAGAATGAGAATCACAAACCCAAAGTCGAAACCACAAAATTCCCTTCCCACCACCACCACCACCACCACCACCACCACAACCAACAATCAACAATGGCGGCATCATCTCTAAGTTCTTGGTCCCACGCACTCGTCAGAATCTCCCCCTACACCTTCTCCGCCGTCGGCATTGCCATTTCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGGGAATCTACATAACCGGAAGTAGTCTGATCGGTGCTGCAATTAAAGCTCCACGTATTACCTCGAAAAATTTAATTAGTGTAATTTTCTGTGAAGCTGTGGCTATATATGGTGTCATTGTGGCCATCATTTTACAAACAAAACTGGAGAGTGTTTCTGCATCTCAAATTTTTACTCCCGAGTCTCTAACAGCAGGATATTCAATTTTTGCCTCTGGGATTATTGTCGGCTTTGCCAACTTGTTTTGCGGGTTATGTGTAGGGATTATTGGAAGCAGCTGTGCATTATCTGATGCCCAAAACTCATCTCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGATTATTTGGTAAAAACCTTCCCGAATGGTCTCGACATAGCTCTGACACCTCACCTCAAAAAGATGAGGGTCACAAAATAAGGTGTGCTATGGCTGGATGCGCCCTTGGTAAAGCCATAAAGGCCTACAGCCTTGCAACTTCTTAA

Coding sequence (CDS)

ATGGCGGCATCATCTCTAAGTTCTTGGTCCCACGCACTCGTCAGAATCTCCCCCTACACCTTCTCCGCCGTCGGCATTGCCATTTCCATCGGCGTTTCTGTCCTCGGAGCCGCCTGGGGAATCTACATAACCGGAAGTAGTCTGATCGGTGCTGCAATTAAAGCTCCACGTATTACCTCGAAAAATTTAATTAGTGTAATTTTCTGTGAAGCTGTGGCTATATATGGTGTCATTGTGGCCATCATTTTACAAACAAAACTGGAGAGTGTTTCTGCATCTCAAATTTTTACTCCCGAGTCTCTAACAGCAGGATATTCAATTTTTGCCTCTGGGATTATTGTCGGCTTTGCCAACTTGTTTTGCGGGTTATGTGTAGGGATTATTGGAAGCAGCTGTGCATTATCTGATGCCCAAAACTCATCTCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGATTATTTGGTAAAAACCTTCCCGAATGGTCTCGACATAGCTCTGACACCTCACCTCAAAAAGATGAGGGTCACAAAATAAGGTGTGCTATGGCTGGATGCGCCCTTGGTAAAGCCATAAAGGCCTACAGCCTTGCAACTTCTTAA

Protein sequence

MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGKNLPEWSRHSSDTSPQKDEGHKIRCAMAGCALGKAIKAYSLATS

Homology

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BLAST of MELO3C003677.jh1 vs. NCBI nr
Match: XP_008466380.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0038796.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa] >TYK31417.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (829), Expect = 5.33e-111
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60
           MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS
Sbjct: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60

Query: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120
           KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF
Sbjct: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120

Query: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI
Sbjct: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178

[Close]

BLAST of MELO3C003677.jh1 vs. NCBI nr
Match: XP_004136340.1 (V-type proton ATPase subunit c''2 [Cucumis sativus] >KGN60119.1 hypothetical protein Csa_002152 [Cucumis sativus])

HSP 1 Score: 315 bits (806), Expect = 1.65e-107
Identity = 172/176 (97.73%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 3   ASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 62
           A+SLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN
Sbjct: 2   AASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 61

Query: 63  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCG 122
           LISVIFCEAVAIYGVIVAIILQTKLESV ASQI+TPESLTAGYSIFASGIIVGF+NLFCG
Sbjct: 62  LISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCG 121

Query: 123 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI
Sbjct: 122 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 177

[Close]

BLAST of MELO3C003677.jh1 vs. NCBI nr
Match: XP_038898797.1 (V-type proton ATPase subunit c''2 isoform X2 [Benincasa hispida])

HSP 1 Score: 306 bits (783), Expect = 6.30e-104
Identity = 168/176 (95.45%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 3   ASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 62
           A+SLSSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN
Sbjct: 7   AASLSSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 66

Query: 63  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCG 122
           LISVIFCEAVAIYGVIVAIILQTKLESVSASQI  PESLTAGYSIF+SGIIVGFANL CG
Sbjct: 67  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIHAPESLTAGYSIFSSGIIVGFANLVCG 126

Query: 123 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK +
Sbjct: 127 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKAV 182

[Close]

BLAST of MELO3C003677.jh1 vs. NCBI nr
Match: XP_002308639.1 (V-type proton ATPase subunit c''2 [Populus trichocarpa] >ABK94274.1 unknown [Populus trichocarpa] >PNT33615.1 hypothetical protein POPTR_006G248700 [Populus trichocarpa] >PNT33616.1 hypothetical protein POPTR_006G248700 [Populus trichocarpa])

HSP 1 Score: 300 bits (768), Expect = 9.22e-102
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 7   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 66
           SSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAA+KAPRITSKNLISV
Sbjct: 3   SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAVKAPRITSKNLISV 62

Query: 67  IFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVG 126
           IFCEAVAIYGVIVAIILQTKLESV ASQI+ PESL AGY+IFASGIIVGFANLFCGLCVG
Sbjct: 63  IFCEAVAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVG 122

Query: 127 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPA+ +
Sbjct: 123 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPARSV 174

[Close]

BLAST of MELO3C003677.jh1 vs. NCBI nr
Match: KAF9851181.1 (hypothetical protein H0E87_015402 [Populus deltoides])

HSP 1 Score: 299 bits (765), Expect = 2.64e-101
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 7   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 66
           SSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV
Sbjct: 3   SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 62

Query: 67  IFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVG 126
           IFCEAVAIYGVIVAIILQTKLESV ASQI+ PESL AGY+IFASGIIVGFANLFCGLCVG
Sbjct: 63  IFCEAVAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVG 122

Query: 127 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA+WPA+ +
Sbjct: 123 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPARSV 174

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.2e-75
Identity = 154/170 (90.59%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 7   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 66
           SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSKNLISV
Sbjct: 9   SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 68

Query: 67  IFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVG 126
           IFCEAVAIYGVIVAIILQTKLESV +S+++  ESL AGY+IFASGIIVGFANL CGLCVG
Sbjct: 69  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVG 128

Query: 127 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 177
           IIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 129 IIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-74
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60
           +A    SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITS
Sbjct: 5   VALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITS 64

Query: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120
           KNLISVIFCEAVAIYGVIVAIILQTKLESV +S+++  ESL AGY+IFASGIIVGFANL 
Sbjct: 65  KNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLV 124

Query: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 177
           CGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 125 CGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 94/160 (58.75%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 13  LVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 72
           L+R SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+IFCE V
Sbjct: 51  LLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVV 110

Query: 73  AIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVGIIGSSC 132
           AIYG+I+AI+  +KL   +A  +++  +L  GYS+F +GI VG +NL CG+ VGI G++ 
Sbjct: 111 AIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATA 170

Query: 133 ALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 173
           A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +A+
Sbjct: 171 AISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 13  LVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 72
           L   SP+ +S +GI ++I +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 73  AIYGVIVAIILQTKLESVSASQ--IFTPESLTAGYSIFASGIIVGFANLFCGLCVGIIGS 132
           AIYG+I+AI++    E  SA++       +  AGYS+F +G+ VG +NLFCG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 133 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 171
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44
Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 13  LVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 72
           L   SP+ +S +GI ++I +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 73  AIYGVIVAIILQTKLESVSAS--QIFTPESLTAGYSIFASGIIVGFANLFCGLCVGIIGS 132
           AIYG+I+AI++    E  SA+  +     +  AGYS+F +G+ VG +NLFCG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 133 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 171
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E5L5 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007260 PE=3 SV=1)

HSP 1 Score: 323 bits (829), Expect = 2.58e-111
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60
           MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS
Sbjct: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60

Query: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120
           KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF
Sbjct: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120

Query: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI
Sbjct: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CR34 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103503804 PE=3 SV=1)

HSP 1 Score: 323 bits (829), Expect = 2.58e-111
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60
           MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS
Sbjct: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60

Query: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120
           KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF
Sbjct: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120

Query: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI
Sbjct: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LGQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878880 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 8.00e-108
Identity = 172/176 (97.73%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 3   ASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 62
           A+SLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN
Sbjct: 2   AASLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKN 61

Query: 63  LISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCG 122
           LISVIFCEAVAIYGVIVAIILQTKLESV ASQI+TPESLTAGYSIFASGIIVGF+NLFCG
Sbjct: 62  LISVIFCEAVAIYGVIVAIILQTKLESVPASQIYTPESLTAGYSIFASGIIVGFSNLFCG 121

Query: 123 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI
Sbjct: 122 LCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 177

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy TrEMBL
Match: A9PD21 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G248700 PE=2 SV=1)

HSP 1 Score: 300 bits (768), Expect = 4.47e-102
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 7   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 66
           SSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAA+KAPRITSKNLISV
Sbjct: 3   SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAVKAPRITSKNLISV 62

Query: 67  IFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVG 126
           IFCEAVAIYGVIVAIILQTKLESV ASQI+ PESL AGY+IFASGIIVGFANLFCGLCVG
Sbjct: 63  IFCEAVAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVG 122

Query: 127 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAKPI 178
           IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPA+ +
Sbjct: 123 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPARSV 174

[Close]

BLAST of MELO3C003677.jh1 vs. ExPASy TrEMBL
Match: A0A6M2F3K0 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 4.47e-102
Identity = 163/170 (95.88%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 7   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 66
           SSWSHALVRISPYTFSAVGIAI+IGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV
Sbjct: 3   SSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 62

Query: 67  IFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVG 126
           IFCEAVAIYGVIVAIILQTKLESV ASQI+ PESL AGY+IFASGIIVGFANLFCGLCVG
Sbjct: 63  IFCEAVAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVG 122

Query: 127 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 176
           IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPA+
Sbjct: 123 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAR 172

[Close]

BLAST of MELO3C003677.jh1 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 281.2 bits (718), Expect = 5.9e-76
Identity = 154/170 (90.59%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 7   SSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISV 66
           SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITSKNLISV
Sbjct: 9   SSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISV 68

Query: 67  IFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVG 126
           IFCEAVAIYGVIVAIILQTKLESV +S+++  ESL AGY+IFASGIIVGFANL CGLCVG
Sbjct: 69  IFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVG 128

Query: 127 IIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 177
           IIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 129 IIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of MELO3C003677.jh1 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 280.8 bits (717), Expect = 7.6e-76
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60
           +A    SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITS
Sbjct: 5   VALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITS 64

Query: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120
           KNLISVIFCEAVAIYGVIVAIILQTKLESV +S+++  ESL AGY+IFASGIIVGFANL 
Sbjct: 65  KNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLV 124

Query: 121 CGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 177
           CGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 125 CGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of MELO3C003677.jh1 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 265.0 bits (676), Expect = 4.3e-71
Identity = 155/206 (75.24%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 1   MAASSLSSWSHALVRISPYTFSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITS 60
           +A    SSW  ALVRISPYTFSA+GIAISIGVSVLGAAWGIYITGSSLIGAAI+APRITS
Sbjct: 5   VALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITS 64

Query: 61  KNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLF 120
           KNLISVIFCEAVAIYGVIVAIILQTKLESV +S+++  ESL AGY+IFASGIIVGFANL 
Sbjct: 65  KNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLV 124

Query: 121 CG------------------------------LCVGIIGSSCALSDAQNSSLFVKILVIE 177
           CG                              LCVGIIGSSCALSDAQNS+LFVKILVIE
Sbjct: 125 CGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKILVIE 184

[Close]

BLAST of MELO3C003677.jh1 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 51/151 (33.77%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 21  FSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 80
           F  +G A ++  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 81  IILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVGIIGSSCALSDAQNS 140
           +I+ T +   + S       L  GY+  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 75  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 141 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 172
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of MELO3C003677.jh1 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 51/151 (33.77%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 21  FSAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 80
           F  +G A ++  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 81  IILQTKLESVSASQIFTPESLTAGYSIFASGIIVGFANLFCGLCVGIIGSSCALSDAQNS 140
           +I+ T +   + S       L  GY+  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 141 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 172
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of MELO3C003677.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466380.1	5.33e-111	100.00	PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0038796.1 V-type...	[more]
XP_004136340.1	1.65e-107	97.73	V-type proton ATPase subunit c''2 [Cucumis sativus] >KGN60119.1 hypothetical pro...	[more]
XP_038898797.1	6.30e-104	95.45	V-type proton ATPase subunit c''2 isoform X2 [Benincasa hispida]	[more]
XP_002308639.1	9.22e-102	94.19	V-type proton ATPase subunit c''2 [Populus trichocarpa] >ABK94274.1 unknown [Pop...	[more]
KAF9851181.1	2.64e-101	94.19	hypothetical protein H0E87_015402 [Populus deltoides]	[more]

BLAST of MELO3C003677.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLA2	8.2e-75	90.59	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
Q9SZY7	1.1e-74	88.07	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
P23968	1.4e-45	58.75	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q91V37	1.2e-44	58.75	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
Q2TA24	1.5e-44	58.75	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of MELO3C003677.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5L5	2.58e-111	100.00	V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CR34	2.58e-111	100.00	V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103503804 PE=3 S...	[more]
A0A0A0LGQ0	8.00e-108	97.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878880 PE=3 SV=1	[more]
A9PD21	4.47e-102	94.19	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G248700 PE=2 ...	[more]
A0A6M2F3K0	4.47e-102	95.88	Uncharacterized protein OS=Populus davidiana OX=266767 PE=3 SV=1	[more]

BLAST of MELO3C003677.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25610.1	5.9e-76	90.59	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.1	7.6e-76	88.07	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	4.3e-71	75.24	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	5.2e-16	33.77	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	5.2e-16	33.77	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 146..169 score: 29.5 coord: 63..87 score: 34.11 coord: 119..145 score: 35.96 coord: 37..61 score: 23.26
None	No IPR available	GENE3D	1.20.120.610		coord: 19..161 e-value: 9.9E-47 score: 160.4
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 5..160
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 5..160
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 21..83 e-value: 9.63989E-30 score: 102.726
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 103..160 e-value: 6.26925E-24 score: 87.9475
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 25..83 e-value: 2.8E-14 score: 53.2 coord: 108..160 e-value: 3.7E-8 score: 33.6
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 100..160
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 17..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003677.jh1.t2	MELO3C003677.jh1.t2	mRNA
MELO3C003677.jh1.t1	MELO3C003677.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
molecular_function	GO:0015078	proton transmembrane transporter activity