MELO3C003669.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C003669.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	polyadenylate-binding protein-interacting protein 5
Location	chr04: 3039689 .. 3041587 (+)
RNA-Seq Expression	MELO3C003669.jh1
Synteny	MELO3C003669.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTCAATCTCAATTTCTTATTTATTGACCCTTTAACTTTCTCATCATTCCTTCATTTGATCCTTCAACTCATTAGGGTTTCTTTACTTCTCTGTTGAATTTCCCTTTTCAAGATCAAGATTTTGTCTCCGAGGGTGAGTTTCCTTCTTTGGAACTCCGATCGTCGTTATAGCTCTTGAATTCTCATGTTTTTCATTGGACTTTACTGTTTTTTGTGTGTATTTTTTAACTGATGTGTGAAATGAATGAAGTTTTGTTTAAAACTGATGTATATGTTCTGATATCCAACTGATTTGCTTTGGTTTTGATATGTTCTCAGTTGATGAAATGTTAGGTTTAGAAGTAATGGTACTTTGCGTTTTACTCTTATGTATTTGGTGATTAAGATTTGCTTTCTTCGATTGTGAAGTGATGAAATCTTTACTTACTGAATGTTAGCTTTGGATATTTGGATTTTCTTCTTTGAATCTCGGTTTTGAAGTGGGTTTGTTACAGGATTTGATTCTTCTGATGTTGCCTTGGTTTGATCTTTGTTTTTCTTGGTGAAGAAAGGTAGATGTGGTTGGATATTTTATTTCTGATCATCCGAATTATGCTTCCAATTGCTAAAAAAATATTACATTGTTGTGAAATTGTGTGCGGGGATTATGTGATGCAGCTCTCTGGAGTTTTCTCGATCTGAATATTATATGATCATGCTTGACTTGAGTGCTATGAGTTTGTTCTTACATCTTCAGTCTTCCTTTGTTTTATTTTTCGGGTTAAATTGTTTTGCAGGAAGGATTGGACAAGATAGAAATCGTTTCTCCATCTGGTGAAATGAAGCCACATGGATCGTCTTTGAATCCGTTTGCAACATCTTACATTCCACTCTCCCAGAGAGGGGCTAACAGAACTTTTATAGCGGAAAACACTTCGAGGGAAAATATTGGGGCTAACTTGCCAGGATACTCCGAACAATGTCTATATCCTCCATATAACAACAGCATTTCCCCTCGGTTAAATATGAATCATGGTAAAAAAGCATCCGTTGCAGCTTCTTCAGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCACAACAGAGTAGTGATTTGTCAGAAATGGAGATTTTTGATCGAGAAGTTAACATGGATCTTGAATTGCTTCAAGTCAGTTTCCCTGGACTATCTGAACAATCCCTTACTGATGTGTATTTTGCAAATAAAGGTGATTTGGATGCTGCTATAGACATGCTGAGCCAGCTTGAGGTTTTCTCTATCTCTCCCCTCGTTTATCGTAATCTGTTGTATTGAACAAACTTGGTTGACGAACGTTGTTTTACGCTTGTATAATGATCTTATAAATGTTGCGAATGCAAATATGCTTAACTAACTCATTTGTTGGTTTAATTCGATATTTAGAACAAACATCCACATGATGTTGAATACGACCCTGAAAGTCTCCCAGACACTTTGGACATTGGTGATATCTCCGAATCCGGGTTTGTAACCGTTGACCAACCCTCTTTCAGAATGAAGAATGTAGCCAATCAAGCAAGTACTTCATCCAGATTCTAAGAGTATTTGTTGGTTTTGAGAAGTGAACTTCTCTTTCCCCTTGTGGGTTTTCTTTGATTACTTTTTTTTTTACTACAAGTAAACATCTTCCTTTGGGATAAGGGGATCCTCTCTGGTTATAGGATTGTATAGTGTTCCGAGTTCTTTGTACTTGCACGAACTCATTTGCAATGGTGTCGACGTCTCTGTTTCGACCGATCAAAAAGATCGATATCTCTTCCATTCCACAATTGTTTTGTGTTGTAGGATACATATATACTTCACAAAAACAGCTTGATATTTGAACTATTTTGGGATTCATAGAGTTGTATGTCTATTACTTCAATAGACTTTTTGGAA

mRNA sequence

TCGTCAATCTCAATTTCTTATTTATTGACCCTTTAACTTTCTCATCATTCCTTCATTTGATCCTTCAACTCATTAGGGTTTCTTTACTTCTCTGTTGAATTTCCCTTTTCAAGATCAAGATTTTGTCTCCGAGGGAAGGATTGGACAAGATAGAAATCGTTTCTCCATCTGGTGAAATGAAGCCACATGGATCGTCTTTGAATCCGTTTGCAACATCTTACATTCCACTCTCCCAGAGAGGGGCTAACAGAACTTTTATAGCGGAAAACACTTCGAGGGAAAATATTGGGGCTAACTTGCCAGGATACTCCGAACAATGTCTATATCCTCCATATAACAACAGCATTTCCCCTCGGTTAAATATGAATCATGGTAAAAAAGCATCCGTTGCAGCTTCTTCAGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCACAACAGAGTAGTGATTTGTCAGAAATGGAGATTTTTGATCGAGAAGTTAACATGGATCTTGAATTGCTTCAAGTCAGTTTCCCTGGACTATCTGAACAATCCCTTACTGATGTGTATTTTGCAAATAAAGGTGATTTGGATGCTGCTATAGACATGCTGAGCCAGCTTGAGAACAAACATCCACATGATGTTGAATACGACCCTGAAAGTCTCCCAGACACTTTGGACATTGGTGATATCTCCGAATCCGGGTTTGTAACCGTTGACCAACCCTCTTTCAGAATGAAGAATGTAGCCAATCAAGCAAGTACTTCATCCAGATTCTAAGAGTATTTGTTGGTTTTGAGAAGTGAACTTCTCTTTCCCCTTGTGGGTTTTCTTTGATTACTTTTTTTTTTACTACAAGTAAACATCTTCCTTTGGGATAAGGGGATCCTCTCTGGTTATAGGATTGTATAGTGTTCCGAGTTCTTTGTACTTGCACGAACTCATTTGCAATGGTGTCGACGTCTCTGTTTCGACCGATCAAAAAGATCGATATCTCTTCCATTCCACAATTGTTTTGTGTTGTAGGATACATATATACTTCACAAAAACAGCTTGATATTTGAACTATTTTGGGATTCATAGAGTTGTATGTCTATTACTTCAATAGACTTTTTGGAA

Coding sequence (CDS)

ATGAAGCCACATGGATCGTCTTTGAATCCGTTTGCAACATCTTACATTCCACTCTCCCAGAGAGGGGCTAACAGAACTTTTATAGCGGAAAACACTTCGAGGGAAAATATTGGGGCTAACTTGCCAGGATACTCCGAACAATGTCTATATCCTCCATATAACAACAGCATTTCCCCTCGGTTAAATATGAATCATGGTAAAAAAGCATCCGTTGCAGCTTCTTCAGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCACAACAGAGTAGTGATTTGTCAGAAATGGAGATTTTTGATCGAGAAGTTAACATGGATCTTGAATTGCTTCAAGTCAGTTTCCCTGGACTATCTGAACAATCCCTTACTGATGTGTATTTTGCAAATAAAGGTGATTTGGATGCTGCTATAGACATGCTGAGCCAGCTTGAGAACAAACATCCACATGATGTTGAATACGACCCTGAAAGTCTCCCAGACACTTTGGACATTGGTGATATCTCCGAATCCGGGTTTGTAACCGTTGACCAACCCTCTTTCAGAATGAAGAATGTAGCCAATCAAGCAAGTACTTCATCCAGATTCTAA

Protein sequence

MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPRLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSFRMKNVANQASTSSRF

Homology

[Close]

BLAST of MELO3C003669.jh1 vs. NCBI nr
Match: XP_008466368.1 (PREDICTED: polyadenylate-binding protein-interacting protein 5 [Cucumis melo])

HSP 1 Score: 384 bits (985), Expect = 3.18e-134
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGAN+PGYSEQCLYPPYNNSISPR
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLYPPYNNSISPR 60

Query: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120
           LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ
Sbjct: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSF 180
           SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYD ESLPDTLDIGDISESGFVTVDQPSF
Sbjct: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPSF 180

Query: 181 RMKNVANQASTSSRF 195
           RMKNVANQASTSSRF
Sbjct: 181 RMKNVANQASTSSRF 195

[Close]

BLAST of MELO3C003669.jh1 vs. NCBI nr
Match: KAA0038789.1 (polyadenylate-binding protein-interacting protein 5 [Cucumis melo var. makuwa] >TYK31409.1 polyadenylate-binding protein-interacting protein 5 [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (985), Expect = 9.60e-134
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGAN+PGYSEQCLYPPYNNSISPR
Sbjct: 32  MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLYPPYNNSISPR 91

Query: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120
           LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ
Sbjct: 92  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 151

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSF 180
           SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYD ESLPDTLDIGDISESGFVTVDQPSF
Sbjct: 152 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPSF 211

Query: 181 RMKNVANQASTSSRF 195
           RMKNVANQASTSSRF
Sbjct: 212 RMKNVANQASTSSRF 226

[Close]

BLAST of MELO3C003669.jh1 vs. NCBI nr
Match: XP_004136335.1 (polyadenylate-binding protein-interacting protein 5 [Cucumis sativus] >KGN60127.1 hypothetical protein Csa_002673 [Cucumis sativus])

HSP 1 Score: 365 bits (936), Expect = 9.41e-127
Identity = 186/196 (94.90%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLY-PPYNNSISP 60
           MKPHGSSLNPFATSYIPLSQRGANRTFI ENTSRENIGANLPGYSEQC+Y PPYNNSISP
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIGENTSRENIGANLPGYSEQCVYNPPYNNSISP 60

Query: 61  RLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120
           RLNMNHGKKASVA + AVKNHPF GSLSQQSSDL+EME+FDREVNMD+ELLQVSFPGLSE
Sbjct: 61  RLNMNHGKKASVAGA-AVKNHPFLGSLSQQSSDLTEMEMFDREVNMDIELLQVSFPGLSE 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180
           QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180

Query: 181 FRMKNVANQASTSSRF 195
           FRMKNVANQASTSSRF
Sbjct: 181 FRMKNVANQASTSSRF 195

[Close]

BLAST of MELO3C003669.jh1 vs. NCBI nr
Match: XP_038900178.1 (polyadenylate-binding protein-interacting protein 5-like [Benincasa hispida])

HSP 1 Score: 343 bits (879), Expect = 8.07e-118
Identity = 179/212 (84.43%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIG----------------ANLPGY 60
           M PHGSSLNP+ATSYIPLSQRGANRTF+AEN+SRENIG                ANLPGY
Sbjct: 1   MNPHGSSLNPYATSYIPLSQRGANRTFVAENSSRENIGSKRTFIVENASRENIGANLPGY 60

Query: 61  SEQCLY-PPYNNSISPRLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREV 120
           SEQC+Y PPY+N ISPRLNM+HGKKA VAA+SAVKNHPFHGSLSQQS DL+EME+FDREV
Sbjct: 61  SEQCVYNPPYSN-ISPRLNMHHGKKAPVAAASAVKNHPFHGSLSQQSGDLTEMEMFDREV 120

Query: 121 NMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLD 180
           NMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLD
Sbjct: 121 NMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLD 180

Query: 181 IGDISESGFVTVDQPSFRMKNVANQASTSSRF 195
           IGDISESGFV VDQ SFRMKNVAN ASTSSRF
Sbjct: 181 IGDISESGFVAVDQASFRMKNVANHASTSSRF 211

[Close]

BLAST of MELO3C003669.jh1 vs. NCBI nr
Match: XP_022935877.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata])

HSP 1 Score: 264 bits (675), Expect = 6.88e-87
Identity = 139/196 (70.92%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNP+ATSYIP+S+R AN+ FIAE++SRENIGANLPG SEQ +           
Sbjct: 16  MKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSEQKMCG--------- 75

Query: 61  LNMNHGKKA-SVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120
           LN+ +GKKA   A +SAVKNHPFHGSLS+ +S+ +EME F  EVNM+LELLQ+ FPGLSE
Sbjct: 76  LNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICFPGLSE 135

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180
           QSLTDVYFAN  DLDAA+DML+QLENKHP D EYDPESLPD+LDIGDISESGF   DQ S
Sbjct: 136 QSLTDVYFANNADLDAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAAADQLS 195

Query: 181 FRMKNVANQASTSSRF 195
            RMKNVA+ ASTS+RF
Sbjct: 196 SRMKNVASGASTSTRF 202

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy Swiss-Prot
Match: Q6NQH9 (Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3702 GN=CID6 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 67/198 (33.84%), Postives = 99/198 (50.00%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTF---IAENTSRENIGANLP--GYSEQCLYPPYNN 60
           MK   S+LNP+A +Y+PLS+R  +      + +   ++      P  GY  Q +      
Sbjct: 1   MKSGSSTLNPYAAAYVPLSKREGSLVDTKPVTQQHMQQQHHQQQPYYGYGVQGMGSYQGT 60

Query: 61  SISPRLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFP 120
            +SP+           + S  V NH              +++  D E++MD+E L  ++P
Sbjct: 61  QMSPK----------KSPSEMVYNH--------------QLKDEDLEMDMDIEYLLATYP 120

Query: 121 GLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTV 180
           GLS++S+ DVY AN  DLDA I+ML+QLE       EY    LPDTLDIGD+ E     +
Sbjct: 121 GLSQESINDVYLANTCDLDATIEMLNQLEIYSTEAEEY----LPDTLDIGDVPE-----I 165

Query: 181 DQPSFRMKNVANQASTSS 194
              S + KN  + AS+SS
Sbjct: 181 ITESSKQKNDGSSASSSS 165

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy Swiss-Prot
Match: Q9LYE5 (Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3702 GN=CID5 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 70/193 (36.27%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKP   +LNP A SY+P+S+R                  +  G  +  ++     + SP 
Sbjct: 1   MKPGAFALNPHAASYVPISKR-----------------VDYGGGDDGLVFA----AKSPT 60

Query: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120
           + ++  KK+S  A   +++            DL      + +++MD+E L V+F GLS++
Sbjct: 61  VEVSMPKKSSEMAYKQIRD-----------DDLD----LEMDIDMDIEYLLVTFSGLSQE 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSF 180
           S+TDVY AN GDL+A I+ML+QLE    +  E + E+LP+TLDIGDISESG      PS 
Sbjct: 121 SITDVYLANGGDLEATIEMLNQLE---IYSTESE-ENLPETLDIGDISESG------PS- 146

Query: 181 RMKNVANQASTSS 194
             K+    ASTSS
Sbjct: 181 TSKSTEVAASTSS 146

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CR41 (polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=LOC103503796 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 1.54e-134
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGAN+PGYSEQCLYPPYNNSISPR
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLYPPYNNSISPR 60

Query: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120
           LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ
Sbjct: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSF 180
           SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYD ESLPDTLDIGDISESGFVTVDQPSF
Sbjct: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPSF 180

Query: 181 RMKNVANQASTSSRF 195
           RMKNVANQASTSSRF
Sbjct: 181 RMKNVANQASTSSRF 195

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TBQ8 (Polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007180 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 4.65e-134
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGAN+PGYSEQCLYPPYNNSISPR
Sbjct: 32  MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLYPPYNNSISPR 91

Query: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120
           LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ
Sbjct: 92  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 151

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSF 180
           SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYD ESLPDTLDIGDISESGFVTVDQPSF
Sbjct: 152 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPSF 211

Query: 181 RMKNVANQASTSSRF 195
           RMKNVANQASTSSRF
Sbjct: 212 RMKNVANQASTSSRF 226

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LHC3 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 4.56e-127
Identity = 186/196 (94.90%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLY-PPYNNSISP 60
           MKPHGSSLNPFATSYIPLSQRGANRTFI ENTSRENIGANLPGYSEQC+Y PPYNNSISP
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIGENTSRENIGANLPGYSEQCVYNPPYNNSISP 60

Query: 61  RLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120
           RLNMNHGKKASVA + AVKNHPF GSLSQQSSDL+EME+FDREVNMD+ELLQVSFPGLSE
Sbjct: 61  RLNMNHGKKASVAGA-AVKNHPFLGSLSQQSSDLTEMEMFDREVNMDIELLQVSFPGLSE 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180
           QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180

Query: 181 FRMKNVANQASTSSRF 195
           FRMKNVANQASTSSRF
Sbjct: 181 FRMKNVANQASTSSRF 195

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F6U2 (polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111442652 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 3.33e-87
Identity = 139/196 (70.92%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNP+ATSYIP+S+R AN+ FIAE++SRENIGANLPG SEQ +           
Sbjct: 16  MKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSEQKMCG--------- 75

Query: 61  LNMNHGKKA-SVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120
           LN+ +GKKA   A +SAVKNHPFHGSLS+ +S+ +EME F  EVNM+LELLQ+ FPGLSE
Sbjct: 76  LNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICFPGLSE 135

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180
           QSLTDVYFAN  DLDAA+DML+QLENKHP D EYDPESLPD+LDIGDISESGF   DQ S
Sbjct: 136 QSLTDVYFANNADLDAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAAADQLS 195

Query: 181 FRMKNVANQASTSSRF 195
            RMKNVA+ ASTS+RF
Sbjct: 196 SRMKNVASGASTSTRF 202

[Close]

BLAST of MELO3C003669.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IIU2 (polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111476662 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 2.12e-83
Identity = 134/196 (68.37%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKPHGSSLNP+ATSYIP+S+R AN+ F+AE++SRENIGANLPG SEQ +           
Sbjct: 16  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCG--------- 75

Query: 61  LNMNHGKKA-SVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120
           LN+ +GKKA   A + AVKNHPFHGSLS+ +S+ +EME F  EVNM+LELLQ+ FPGLSE
Sbjct: 76  LNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSE 135

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180
           QSL  VYFAN  DLDAA+DML+QLE+KHP D EYDPESLPD+LDIGDISESGF   DQ S
Sbjct: 136 QSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLS 195

Query: 181 FRMKNVANQASTSSRF 195
            RMKNVA+ ASTS+RF
Sbjct: 196 SRMKNVASGASTSTRF 202

[Close]

BLAST of MELO3C003669.jh1 vs. TAIR 10
Match: AT5G25540.1 (CTC-interacting domain 6 )

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17
Identity = 67/198 (33.84%), Postives = 99/198 (50.00%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTF---IAENTSRENIGANLP--GYSEQCLYPPYNN 60
           MK   S+LNP+A +Y+PLS+R  +      + +   ++      P  GY  Q +      
Sbjct: 1   MKSGSSTLNPYAAAYVPLSKREGSLVDTKPVTQQHMQQQHHQQQPYYGYGVQGMGSYQGT 60

Query: 61  SISPRLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFP 120
            +SP+           + S  V NH              +++  D E++MD+E L  ++P
Sbjct: 61  QMSPK----------KSPSEMVYNH--------------QLKDEDLEMDMDIEYLLATYP 120

Query: 121 GLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTV 180
           GLS++S+ DVY AN  DLDA I+ML+QLE       EY    LPDTLDIGD+ E     +
Sbjct: 121 GLSQESINDVYLANTCDLDATIEMLNQLEIYSTEAEEY----LPDTLDIGDVPE-----I 165

Query: 181 DQPSFRMKNVANQASTSS 194
              S + KN  + AS+SS
Sbjct: 181 ITESSKQKNDGSSASSSS 165

[Close]

BLAST of MELO3C003669.jh1 vs. TAIR 10
Match: AT5G11440.1 (CTC-interacting domain 5 )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 70/193 (36.27%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANLPGYSEQCLYPPYNNSISPR 60
           MKP   +LNP A SY+P+S+R                  +  G  +  ++     + SP 
Sbjct: 1   MKPGAFALNPHAASYVPISKR-----------------VDYGGGDDGLVFA----AKSPT 60

Query: 61  LNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSEQ 120
           + ++  KK+S  A   +++            DL      + +++MD+E L V+F GLS++
Sbjct: 61  VEVSMPKKSSEMAYKQIRD-----------DDLD----LEMDIDMDIEYLLVTFSGLSQE 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPSF 180
           S+TDVY AN GDL+A I+ML+QLE    +  E + E+LP+TLDIGDISESG      PS 
Sbjct: 121 SITDVYLANGGDLEATIEMLNQLE---IYSTESE-ENLPETLDIGDISESG------PS- 146

Query: 181 RMKNVANQASTSS 194
             K+    ASTSS
Sbjct: 181 TSKSTEVAASTSS 146

[Close]

BLAST of MELO3C003669.jh1 vs. TAIR 10
Match: AT2G26280.1 (CTC-interacting domain 7 )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 28/66 (42.42%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 100 DREVNMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLE-------NKHPHDVE 159
           D EVN  ++ L   FPG + +SL +VYFAN  DL   I+ML+QLE       N++     
Sbjct: 215 DMEVN-PVDFLASQFPGFAAESLAEVYFANGCDLQLTIEMLTQLELQVDGGLNQNISPKT 274

The following BLAST results are available for this feature:

BLAST of MELO3C003669.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466368.1	3.18e-134	98.97	PREDICTED: polyadenylate-binding protein-interacting protein 5 [Cucumis melo]	[more]
KAA0038789.1	9.60e-134	98.97	polyadenylate-binding protein-interacting protein 5 [Cucumis melo var. makuwa] >...	[more]
XP_004136335.1	9.41e-127	94.90	polyadenylate-binding protein-interacting protein 5 [Cucumis sativus] >KGN60127....	[more]
XP_038900178.1	8.07e-118	84.43	polyadenylate-binding protein-interacting protein 5-like [Benincasa hispida]	[more]
XP_022935877.1	6.88e-87	70.92	polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata]	[more]

BLAST of MELO3C003669.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQH9	1.5e-16	33.84	Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3...	[more]
Q9LYE5	1.9e-16	36.27	Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of MELO3C003669.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CR41	1.54e-134	98.97	polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7TBQ8	4.65e-134	98.97	Polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo var. makuwa ...	[more]
A0A0A0LHC3	4.56e-127	94.90	CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV...	[more]
A0A6J1F6U2	3.33e-87	70.92	polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita moschata O...	[more]
A0A6J1IIU2	2.12e-83	68.37	polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita maxima OX=...	[more]

BLAST of MELO3C003669.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25540.1	1.0e-17	33.84	CTC-interacting domain 6	[more]
AT5G11440.1	1.4e-17	36.27	CTC-interacting domain 5	[more]
AT2G26280.1	1.0e-04	42.42	CTC-interacting domain 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.8.10		coord: 86..148 e-value: 1.9E-6 score: 29.4
None	No IPR available	PANTHER	PTHR37252:SF3	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6	coord: 1..194
IPR003892	Ubiquitin system component CUE	PFAM	PF02845	CUE	coord: 108..143 e-value: 3.5E-5 score: 23.4
IPR003892	Ubiquitin system component CUE	PROSITE	PS51140	CUE	coord: 102..145 score: 12.496307
IPR038981	Polyadenylate-binding protein-interacting protein 5/6	PANTHER	PTHR37252	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6	coord: 1..194
IPR041806	Polyadenylate-binding protein-interacting protein 5/6/7, CUE domain	CDD	cd14371	CUE_CID7_like	coord: 104..146 e-value: 5.54909E-18 score: 71.9072
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 102..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003669.jh1.t1	MELO3C003669.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043130	ubiquitin binding