MELO3C003585 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003585
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 2335654 .. 2340243 (-)
RNA-Seq Expression	MELO3C003585
Synteny	MELO3C003585

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTTCAACTCATCGTCTTTCCCTCCTCTACACCAACTAACTCTTCAACTCAAGCCAAAGCAGGTAAAATCCATTCGCCATTTCCCCTTTCCTTGAATCTCTTCGCTCCTCATTTTCTTTTACGTTTTGCACTTTTACATTTGCTTTTCTGAATATTGGTTTGGCTTGATTGCGATGTATGTTATTATGTATGTACATGATTCTTATTTACTTCTTTGAGCGCGTGTTTGTATGATGCGAGTTGTGATACTAGAAATTCTTGTATATTCTTTTGGGCGTTGTTTTCCTTTATTGATTTGATAAGTAGATGAGATGTTAGTTCTTGAATTTGTTTTTTCTGAAAATTGGCTTGTTTATATTTTGGATGTATGTGTGTGATTGTTATTTACTTTTTGTTTGTGCGTGCGTATTTGTGTTATGATCTGTGCGTTATCAGTGAATGCTCGTGTTTTGATTGGTTGGAGGTTCTTTTGTTTTTTGTTTTTCTGTAAGGCTGTAACTGAATGTTACTCTTTGGAACTGAAATGAATTCGGTGCATTTTTCTAATGAAAAGGCTTGGAGGGGCAAGTGGAATGAAATTCGTGGTTGGCCAGTTAATGTGACTAGTAGCCAATGGGAGAGTCAGGAGACGACGAGGCTAGTTATAGAACCAAAAACAAACATCAGATTGCCCCTGCTACTGTCAAGAAAAGATGGGCTCCATCAGTTCCTGTCAAGGTACTTGCACTTCTCACTCAGTCATTATCGATTTACTGAAGACGTTCTGATCCAAGATTAGTTGTTTCATGGCTTGGTTTTACTTCGTTTTTTTGCAAATAGGCTATTGTGCAATTTTCTTGATATCTTGTATAACCAACTGACATTTGTTAATGGCCATTTCAATTTTGGTAATCATGTATGTTTCAGCCAATATCTCTTGTTTTATTCTTCTAGGAGCTTAAAATCTTCATAATATGCTTTACCAATTGCTGCATGTTTTGTTTTGACACTTGATGAGTTATACCGTTATACGGTAGTAGTAGGACAGATGATAGTTTTAGGCTTAAAATAAAATAGGTTTCTGCATTCTGCAGCGAAGGCAAATTATAGAGAAATCCAAACCAAGCCAAGTTGAGATTTTTAGAGAATTAGGATGTGGAGGAATATCGATATATCGATAGTTGTATTGACAGAGTAAACAAAGCATGTTATAATTAAAAAAAGGGTCATATTTTTTTTCCACATCGGGCGTTCGGCTCGTAAGTTCAGAGTTATCATCACTTGACGGAGAAATCAGAATATAGTGAAAGATCGACTATTGAAGTTATAGTAAGGAATTGAGCGTGCATGGTATTTTCATCTACTTTTGTCTATTATTTTAGCTTTTTGGACATACCTATAGTTTGAACTGTTATAGAATGACTTGCGTTTTCAAGAGGTAACTAATGCATCGCATAAATGCATGGACAGTCAGTTATAATTTTATTTGCACTTAACTTGATCTAGCATGATATTACGAAAATAAAATGGTGAATTATCTCCTCGTGTGGTTTCCCAAATGATGCATCACTCTGTTCTTACAAGAGTGCCAGATGTTAAGAAGTTTGTAAATTCAGTAGAAAAAGGTTATAAACAAAAATCAGTTTCCATAATATTTTGCCCATACAAAACGGCCACCTCCCCCCTCTTTTGGCTTTTTGGAAACCTGTAGTAGATATACAGTTTCATCTAACCTGCTCAATCTTTTGCAGGAAGCTGCAGATTAGTTAACACCTAAATACTGTGATTCAAATATTTTAACAATATTTTTTATTTCATTTCACTGCTGAGTCATTCAGTCATATTTTATTTTCCCTCATCTGCTTTTTGGCCCTCGAAATTCCTTTCGTGCAGGATGTTTCTCCATATAACCAAAAGAAGACACACCCCACTCTAAGTTCTGAAGATGTACAAAGTGAATCCAGTTGTTTAGATTGCACGTCCAGCGAAAGTTGTGGAATAGTGCGCTCAAGAACAAAATTGATGAACATATTGATAGAAAGAGGGAAACCTCAGGGAGCACAGAACATTTTTGACAATTTGATCGCGGAGGGGCATAGGCCCTCTCTAGTAACATATACATCCCTGCTGACTGCATTGACTGTCCAAAAGCGCTTTAAGTGTATATATTCAGTTATACAAATGGTGGAAGAAAAAGGAATGATTCCAGACTCTATATTTTTCAATGCTGTTATCAATGCTTTCTCCGAAGCTGGTAAGGTAGAAGAAGCCATGCTAACATTTAGAAAAATGAAGGCTAGTGGACTAAGGCCAATTACAAGCACTTTCAACACTTTGATAAAAGGATATGGCATTGCTGGCAAGCCTGAAGAAACTGTACAACTGCTGGACTTGATGTACAGAGAGGAAAATTTAAAACCCAATCTGAGAACTTGTAATGTACTTGTCAGAGCATGGTGTAAGAAGAAGAAAATCTCAGAGGCATGGAATGTAGTGCAAAGCATCGGATCCCTGGGAATCAAACCTGATGCTGTTACTTACAACACCTTAGCAACTGCTTATGCCCAGAATGGAGAAACAGAACGGGCTGAAGAGATAATTCAAGTAATGCAAGATAATAACGTTCAACCTAATCAACAAACTTGCAGCATTGTGGCTTTTGGATATTGCAAGGAAGTAGACTAAAGGAGGCCATGAGATTTGTATACAAGATGAAGAATCTTGGCGTTCAGCCTAATTTGGTTCCTTTTAACTCACTGATTAAGGGATTTATGGAGTTGATGGACAGAGATGGTGTTAACAAGGTACGATTGGCCCCTTAATTATTTTGTTTAATTTCTTGTTCTAGTTCTCATTGATTCATATGATAAGGTAGTGAGATAAAAGCCCTTAATATTTGTAACTTTGACCATTTCTAACTTTTGACTTGCTTGCTTAATTCCGGAGGTTTTATTTTGGTTTCATACTAAAAAGGAAAAGGGTGAAAAAATCTTCTGGACTTTTTGTCAAGGAGAAAATTGTTTATTGGCTCGTGTGGAATTGATGCTTCTTGCAGAACCATCATATTTAATGTAGTGTTCATAAGAGTTTACTTTACTTTTTGCTTTTGTGATTTAGTGAAGCAAAACTCTAAGGAACACGGGCATTATCATTAACGCCCAATCTATCTTCCTATACAGTATACCCGATCTATGCATGTCTATTTATGTTAATCATCTGTCTAGCTTATCATTTTAACCTAGGACTAAGTATATTTGTAGTATTGTGATGCTACATATTTGTTTTACTTATTGTTACTTTTTGAAGAGCCAATACTGGAAAACAAAACGTGCAGGTTTTGATGTTGATGAAAGAATTTGGAGTCGAGCCAGATGTGATTACTTATAGCACAGTAATGAATGCTTGGAGCAAGGCTGGATTCATGGCAAAGTGCAGAGAAGTTTTTGATGAGATGGTGAATGCTGGTATTGAACCCGATGCACATGCGTATAGCATTCTAGCGAAAGGTTACGTCCGTTCGCAAGAACCTAAAAAGGCTGAAGATGACTAGCTACAGAAAACGTCCAAACGTTGTTATCTTTACAACCATCATTAGTGGATGGTGCAGTTCTGGCAGAATGGATAACGCCATAAAGATCTTAAACAAAATGTGTGAATATGGAGTTTCTCCTAATCTGAAGACATTTGAGACTATAATATGCGGATATGGAGAGGCAAAACAGCCATGGAAGGCAGAAGAAATGCTTCAAATAATGGAGGAATATGAAATTAAACCTGAGAAATCTACCATCTTATTAGTTGCAGAAGCCTGGCGCTCTATTGGATTGACAAAAGAAGCAAACAGAGTTATAGGCATTATGAAACGCATGGAAAGCTCTGACCAAACAGAGACGAAGAACGAGATGCAGGCGGAGAACTCGGACAAGTTCTATAAGAAGCAGCTTTCTGGTACCTCTCATACAAATATATTGCAGATACCGAACGCGGTTGGTCAAAAAGGCTCAACCACTGGAAATAAAAGAAACCGTGTCTTATTAAGAGATGTTGATTCTTCTTTAGAATGTTCGTGGCTAGCAACAAAATCCATTTACCAATCTCGCATTTGCAAGTTTGGGGAAAGATTTCCTATCATCTCTCGAAAGCAGCCGCAAGCACAAATTGGTATGTACAGTCATTTCACACGTTCATGTTCACTTGTGACACTGATATAATCATTTCACACATTCATGTACAGTCGTGACATTGATGTAAAGGTCAACATAGATGAAATATTTTTCTTTCCTGGCATTAAGATTACTCCATAAGAAACTTGTGTCGGAGGTAATCAAGACTATATTAGTAATCAGTTGGGAAAGTTGATGGGATATTTTGTTAAAACTTAGAAATAGAGGAAGTATGGATGGAGGCTGATGGATTCATTTGGTGGGTGAATTATGGCTTCTAAGTTCCTCAAATTACTTAGTTCATTAGTTCCTTAACATATTTTGGTTCTAATTTGTCATGAAGATCTATTACTTCTGTGTGATTTTGATCTCCAACTTCGTGTAGCATTCGTTTTCTAAATGAATTGCTTCTTTCATCATACATAATGAGTCAAGATCGTTATAT

mRNA sequence

AGCCTTTCAACTCATCGTCTTTCCCTCCTCTACACCAACTAACTCTTCAACTCAAGCCAAAGCAGGCTTGGAGGGGCAAGTGGAATGAAATTCGTGGTTGGCCAGTTAATGTGACTAGTAGCCAATGGGAGAGTCAGGAGACGACGAGGCTAGTTATAGAACCAAAAACAAACATCAGATTGCCCCTGCTACTGTCAAGAAAAGATGGGCTCCATCAGTTCCTGTCAAGGATGTTTCTCCATATAACCAAAAGAAGACACACCCCACTCTAAGTTCTGAAGATGTACAAAGTGAATCCAGTTGTTTAGATTGCACGTCCAGCGAAAGTTGTGGAATAGTGCGCTCAAGAACAAAATTGATGAACATATTGATAGAAAGAGGGAAACCTCAGGGAGCACAGAACATTTTTGACAATTTGATCGCGGAGGGGCATAGGCCCTCTCTAGTAACATATACATCCCTGCTGACTGCATTGACTGTCCAAAAGCGCTTTAAGTGTATATATTCAGTTATACAAATGGTGGAAGAAAAAGGAATGATTCCAGACTCTATATTTTTCAATGCTGTTATCAATGCTTTCTCCGAAGCTGGTAAGGTAGAAGAAGCCATGCTAACATTTAGAAAAATGAAGGCTAGTGGACTAAGGCCAATTACAAGCACTTTCAACACTTTGATAAAAGGATATGGCATTGCTGGCAAGCCTGAAGAAACTGTACAACTGCTGGACTTGATGTACAGAGAGGAAAATTTAAAACCCAATCTGAGAACTTGTAATGTACTTGTCAGAGCATGGTGTAAGAAGAAGAAAATCTCAGAGGCATGGAATGTAGTGCAAAGCATCGGATCCCTGGGAATCAAACCTGATGCTGTTACTTACAACACCTTAGCAACTGCTTATGCCCAGAATGGAGAAACAGAACGGGCTGAAGAGATAATTCAAGTAATGCAAGATAATAACGTTCAACCTAATCAACAAACTTGCAGCATTGTGGCTTTTGGATATTGCAAGGAAGTAGACTAAAGGAGGCCATGAGATTTGTATACAAGATGAAGAATCTTGGCGTTCAGCCTAATTTGGTTCCTTTTAACTCACTGATTAAGGGATTTATGGAGTTGATGGACAGAGATGGTGTTAACAAGGTTTTGATGTTGATGAAAGAATTTGGAGTCGAGCCAGATGTGATTACTTATAGCACAGTAATGAATGCTTGGAGCAAGGCTGGATTCATGGCAAAGTGCAGAGAAGTTTTTGATGAGATGGTGAATGCTGGTATTGAACCCGATGCACATGCGTATAGCATTCTAGCGAAAGGTTACGTCCGTTCGCAAGAACCTAAAAAGGCTGAAGATGACTAGCTACAGAAAACGTCCAAACGTTGTTATCTTTACAACCATCATTAGTGGATGGTGCAGTTCTGGCAGAATGGATAACGCCATAAAGATCTTAAACAAAATGTGTGAATATGGAGTTTCTCCTAATCTGAAGACATTTGAGACTATAATATGCGGATATGGAGAGGCAAAACAGCCATGGAAGGCAGAAGAAATGCTTCAAATAATGGAGGAATATGAAATTAAACCTGAGAAATCTACCATCTTATTAGTTGCAGAAGCCTGGCGCTCTATTGGATTGACAAAAGAAGCAAACAGAGTTATAGGCATTATGAAACGCATGGAAAGCTCTGACCAAACAGAGACGAAGAACGAGATGCAGGCGGAGAACTCGGACAAGTTCTATAAGAAGCAGCTTTCTGGTACCTCTCATACAAATATATTGCAGATACCGAACGCGGTTGGTCAAAAAGGCTCAACCACTGGAAATAAAAGAAACCGTGTCTTATTAAGAGATGTTGATTCTTCTTTAGAATGTTCGTGGCTAGCAACAAAATCCATTTACCAATCTCGCATTTGCAAGTTTGGGGAAAGATTTCCTATCATCTCTCGAAAGCAGCCGCAAGCACAAATTGGTATGTACAGTCATTTCACACGTTCATGTTCACTTGTGACACTGATATAATCATTTCACACATTCATGTACAGTCGTGACATTGATGTAAAGGTCAACATAGATGAAATATTTTTCTTTCCTGGCATTAAGATTACTCCATAAGAAACTTGTGTCGGAGGTAATCAAGACTATATTAGTAATCAGTTGGGAAAGTTGATGGGATATTTTGTTAAAACTTAGAAATAGAGGAAGTATGGATGGAGGCTGATGGATTCATTTGGTGGGTGAATTATGGCTTCTAAGTTCCTCAAATTACTTAGTTCATTAGTTCCTTAACATATTTTGGTTCTAATTTGTCATGAAGATCTATTACTTCTGTGTGATTTTGATCTCCAACTTCGTGTAGCATTCGTTTTCTAAATGAATTGCTTCTTTCATCATACATAATGAGTCAAGATCGTTATAT

Coding sequence (CDS)

ATGGGAGAGTCAGGAGACGACGAGGCTAGTTATAGAACCAAAAACAAACATCAGATTGCCCCTGCTACTGTCAAGAAAAGATGGGCTCCATCAGTTCCTGTCAAGGATGTTTCTCCATATAACCAAAAGAAGACACACCCCACTCTAAGTTCTGAAGATGTACAAAGTGAATCCAGTTGTTTAGATTGCACGTCCAGCGAAAGTTGTGGAATAGTGCGCTCAAGAACAAAATTGATGAACATATTGATAGAAAGAGGGAAACCTCAGGGAGCACAGAACATTTTTGACAATTTGATCGCGGAGGGGCATAGGCCCTCTCTAGTAACATATACATCCCTGCTGACTGCATTGACTGTCCAAAAGCGCTTTAAGTGTATATATTCAGTTATACAAATGGTGGAAGAAAAAGGAATGATTCCAGACTCTATATTTTTCAATGCTGTTATCAATGCTTTCTCCGAAGCTGGTAAGGTAGAAGAAGCCATGCTAACATTTAGAAAAATGAAGGCTAGTGGACTAAGGCCAATTACAAGCACTTTCAACACTTTGATAAAAGGATATGGCATTGCTGGCAAGCCTGAAGAAACTGTACAACTGCTGGACTTGATGTACAGAGAGGAAAATTTAAAACCCAATCTGAGAACTTGTAATGTACTTGTCAGAGCATGGTGTAAGAAGAAGAAAATCTCAGAGGCATGGAATGTAGTGCAAAGCATCGGATCCCTGGGAATCAAACCTGATGCTGTTACTTACAACACCTTAGCAACTGCTTATGCCCAGAATGGAGAAACAGAACGGGCTGAAGAGATAATTCAAGTAATGCAAGATAATAACGTTCAACCTAATCAACAAACTTGCAGCATTGTGGCTTTTGGATATTGCAAGGAAGTAGACTAA

Protein sequence

MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSCLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKEVD

Homology

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BLAST of MELO3C003585 vs. NCBI nr
Match: KAA0038719.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK31331.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 586.6 bits (1511), Expect = 1.2e-163
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60
           MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC
Sbjct: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60

Query: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120
           LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ
Sbjct: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120

Query: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180
           KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF
Sbjct: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180

Query: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240
           NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG
Sbjct: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240

Query: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE
Sbjct: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 296

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BLAST of MELO3C003585 vs. NCBI nr
Match: XP_016903528.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 [Cucumis melo])

HSP 1 Score: 586.6 bits (1511), Expect = 1.2e-163
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60
           MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC
Sbjct: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60

Query: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120
           LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ
Sbjct: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120

Query: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180
           KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF
Sbjct: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180

Query: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240
           NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG
Sbjct: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240

Query: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE
Sbjct: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 296

[Close]

BLAST of MELO3C003585 vs. NCBI nr
Match: XP_038898466.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Benincasa hispida])

HSP 1 Score: 512.3 bits (1318), Expect = 2.8e-141
Identity = 258/296 (87.16%), Postives = 278/296 (93.92%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60
           MGESGDDEA  RT NK Q A ATVKK+W+ SVPVKDVSPYN+K THPTLSSED QSE SC
Sbjct: 1   MGESGDDEARSRTINKDQTATATVKKKWSRSVPVKDVSPYNKKNTHPTLSSEDGQSEFSC 60

Query: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120
           LDCT S SCGIVRSRTKLMNILIE+GKPQ AQN+FDNLIAEGHRPSLVTYT+LL+ALTVQ
Sbjct: 61  LDCTPSVSCGIVRSRTKLMNILIEKGKPQEAQNVFDNLIAEGHRPSLVTYTTLLSALTVQ 120

Query: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180
           KRFKCI SVIQMVEEKGMIPDSIFFNAVINAFSEAG VEEAMLTFRKMKASGLRP TSTF
Sbjct: 121 KRFKCINSVIQMVEEKGMIPDSIFFNAVINAFSEAGNVEEAMLTFRKMKASGLRPGTSTF 180

Query: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240
           NTLIKGYGIAGKPEETV+LLDLMYREENLKPNLRTCNVLVRAWCKKKKI+EAWNVVQ++ 
Sbjct: 181 NTLIKGYGIAGKPEETVELLDLMYREENLKPNLRTCNVLVRAWCKKKKIAEAWNVVQNMV 240

Query: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           +LGIKPDAVTYNT+ATA+AQ+GET+RAEEII++MQDNN+QPNQ+TCSIVA GYCKE
Sbjct: 241 ALGIKPDAVTYNTIATAHAQSGETDRAEEIIKLMQDNNIQPNQRTCSIVACGYCKE 296

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BLAST of MELO3C003585 vs. NCBI nr
Match: XP_022141330.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Momordica charantia])

HSP 1 Score: 471.1 bits (1211), Expect = 7.2e-129
Identity = 238/297 (80.13%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAP-SVPVKDVSPYNQKKTHPTLSSEDVQSESS 60
           MGESG+DEA  RT NKHQ   ATV KR AP SVP+KDVSPYN+KKTH T+S EDVQS S 
Sbjct: 1   MGESGEDEALSRTINKHQTTTATVNKRGAPRSVPIKDVSPYNKKKTHSTVSLEDVQSGSC 60

Query: 61  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 120
           CL CTSSESCG+VRS+TKLMNILIERGKPQ AQN+FDNLIA+GHRPSLVTYT+LL+ALTV
Sbjct: 61  CLGCTSSESCGMVRSKTKLMNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTV 120

Query: 121 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 180
           QKRFK I SVI MVEE GM PDSIFFNAVINAFSEAG VEEAM+ F+KMKASGLRP TST
Sbjct: 121 QKRFKFIQSVILMVEENGMEPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTST 180

Query: 181 FNTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSI 240
           FNTLIKGYGIAGKPEET++LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+++
Sbjct: 181 FNTLIKGYGIAGKPEETIELLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENM 240

Query: 241 GSLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
            +LGIKPDAVTYNT+ATA+AQ+GET++AE++I  MQDN ++PNQ+TCSI+A GYCKE
Sbjct: 241 IALGIKPDAVTYNTIATAHAQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKE 297

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BLAST of MELO3C003585 vs. NCBI nr
Match: XP_038898467.1 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Benincasa hispida])

HSP 1 Score: 395.2 bits (1014), Expect = 5.0e-106
Identity = 195/218 (89.45%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 79  MNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKGM 138
           MNILIE+GKPQ AQN+FDNLIAEGHRPSLVTYT+LL+ALTVQKRFKCI SVIQMVEEKGM
Sbjct: 1   MNILIEKGKPQEAQNVFDNLIAEGHRPSLVTYTTLLSALTVQKRFKCINSVIQMVEEKGM 60

Query: 139 IPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQ 198
           IPDSIFFNAVINAFSEAG VEEAMLTFRKMKASGLRP TSTFNTLIKGYGIAGKPEETV+
Sbjct: 61  IPDSIFFNAVINAFSEAGNVEEAMLTFRKMKASGLRPGTSTFNTLIKGYGIAGKPEETVE 120

Query: 199 LLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAY 258
           LLDLMYREENLKPNLRTCNVLVRAWCKKKKI+EAWNVVQ++ +LGIKPDAVTYNT+ATA+
Sbjct: 121 LLDLMYREENLKPNLRTCNVLVRAWCKKKKIAEAWNVVQNMVALGIKPDAVTYNTIATAH 180

Query: 259 AQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           AQ+GET+RAEEII++MQDNN+QPNQ+TCSIVA GYCKE
Sbjct: 181 AQSGETDRAEEIIKLMQDNNIQPNQRTCSIVACGYCKE 218

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BLAST of MELO3C003585 vs. ExPASy Swiss-Prot
Match: Q8S9D1 (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX=3702 GN=ATC401 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.8e-74
Identity = 139/238 (58.40%), Postives = 179/238 (75.21%), Query Frame = 0


Query: 60  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 119
           C+ C+   +CG VRSRTKLMN LIERG+PQ A +IF+ LI EGH+PSL+TYT+L+TALT 
Sbjct: 307 CVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR 366

Query: 120 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 179
           QK F  + S+I  VE+ G+ PD+I FNA+INA SE+G +++AM  F KMK SG +P  ST
Sbjct: 367 QKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAST 426

Query: 180 FNTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSI 239
           FNTLIKGYG  GK EE+ +LLD+M R+E L+PN RTCN+LV+AWC ++KI EAWN+V  +
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486

Query: 240 GSLGIKPDAVTYNTLATAYAQNGETERAEE-IIQVMQDNNVQPNQQTCSIVAFGYCKE 297
            S G+KPD VT+NTLA AYA+ G T  AE+ II  M  N V+PN +TC  +  GYC+E
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544

[Close]

BLAST of MELO3C003585 vs. ExPASy Swiss-Prot
Match: Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 279.3 bits (713), Expect = 5.2e-74
Identity = 140/241 (58.09%), Postives = 174/241 (72.20%), Query Frame = 0


Query: 60  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 119
           C  C    SC  VRSRTKLMN+LIERG+P  AQ +F  L   GHRPSL++YT+LL A+TV
Sbjct: 33  CKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92

Query: 120 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 179
           QK++  I S++  VE+ G   DSIFFNAVINAFSE+G +E+A+    KMK  GL P TST
Sbjct: 93  QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 180 FNTLIKGYGIAGKPEETVQLLDLMYREENLK--PNLRTCNVLVRAWCKKKKISEAWNVVQ 239
           +NTLIKGYGIAGKPE + +LLDLM  E N+   PN+RT NVLV+AWCKKKK+ EAW VV+
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 240 SIGSLGIKPDAVTYNTLATAYAQNGETERAE-EIIQVM-QDNNVQPNQQTCSIVAFGYCK 297
            +   G++PD VTYNT+AT Y Q GET RAE E+++ M      +PN +TC IV  GYC+
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

[Close]

BLAST of MELO3C003585 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.3e-26
Identity = 67/218 (30.73%), Postives = 119/218 (54.59%), Query Frame = 0


Query: 78  LMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKG 137
           ++ IL + G+ + A   F+ +I EG  P  + Y SL+  L    +++    +I  + ++G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 138 MIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETV 197
           +  ++IFFN++I++  + G+V E+   F  M   G++P   T+NTLI GY +AGK +E +
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 198 QLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATA 257
           +LL  M     LKPN  T + L+  +CK  ++ +A  + + + S G+ PD +TYN +   
Sbjct: 532 KLLSGMV-SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG 591

Query: 258 YAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCK 296
             Q   T  A+E+   + ++  Q    T +I+  G CK
Sbjct: 592 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628

[Close]

BLAST of MELO3C003585 vs. ExPASy Swiss-Prot
Match: Q9SI78 (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana OX=3702 GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-25
Identity = 68/209 (32.54%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 86  GKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKGMIPDSIFF 145
           G    A  +FD +  +G R   VTY SL+  L    R+     +++ +  + ++P+ I F
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247

Query: 146 NAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQLLDLMYR 205
            AVI+ F + GK  EAM  + +M    + P   T+N+LI G  + G+ +E  Q+LDLM  
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307

Query: 206 EENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNGETE 265
           +  L P++ T N L+  +CK K++ E   + + +   G+  D +TYNT+   Y Q G  +
Sbjct: 308 KGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 367

Query: 266 RAEEIIQVMQDNNVQPNQQTCSIVAFGYC 295
            A+EI   M     +PN +T SI+ +G C
Sbjct: 368 AAQEIFSRMDS---RPNIRTYSILLYGLC 392

[Close]

BLAST of MELO3C003585 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-24
Identity = 63/217 (29.03%), Postives = 121/217 (55.76%), Query Frame = 0


Query: 78  LMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKG 137
           +++ L + G    A ++F+ +  +G +  +VTY+SL+  L    ++     +++ +  + 
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 138 MIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETV 197
           +IPD + F+A+I+ F + GK+ EA   + +M   G+ P T T+N+LI G+       E  
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370

Query: 198 QLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATA 257
           Q+ DLM   +  +P++ T ++L+ ++CK K++ +   + + I S G+ P+ +TYNTL   
Sbjct: 371 QMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 430

Query: 258 YAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYC 295
           + Q+G+   A+E+ Q M    V P+  T  I+  G C
Sbjct: 431 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466

[Close]

BLAST of MELO3C003585 vs. ExPASy TrEMBL
Match: A0A5D3E700 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006310 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.7e-164
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60
           MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC
Sbjct: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60

Query: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120
           LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ
Sbjct: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120

Query: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180
           KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF
Sbjct: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180

Query: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240
           NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG
Sbjct: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240

Query: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE
Sbjct: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 296

[Close]

BLAST of MELO3C003585 vs. ExPASy TrEMBL
Match: A0A1S4E5M4 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 OS=Cucumis melo OX=3656 GN=LOC103503718 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 5.7e-164
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60
           MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC
Sbjct: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60

Query: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120
           LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ
Sbjct: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120

Query: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180
           KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF
Sbjct: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180

Query: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240
           NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG
Sbjct: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240

Query: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE
Sbjct: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 296

[Close]

BLAST of MELO3C003585 vs. ExPASy TrEMBL
Match: A0A6J1CHS1 (pentatricopeptide repeat-containing protein At5g25630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011746 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.5e-129
Identity = 238/297 (80.13%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAP-SVPVKDVSPYNQKKTHPTLSSEDVQSESS 60
           MGESG+DEA  RT NKHQ   ATV KR AP SVP+KDVSPYN+KKTH T+S EDVQS S 
Sbjct: 1   MGESGEDEALSRTINKHQTTTATVNKRGAPRSVPIKDVSPYNKKKTHSTVSLEDVQSGSC 60

Query: 61  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 120
           CL CTSSESCG+VRS+TKLMNILIERGKPQ AQN+FDNLIA+GHRPSLVTYT+LL+ALTV
Sbjct: 61  CLGCTSSESCGMVRSKTKLMNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTV 120

Query: 121 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 180
           QKRFK I SVI MVEE GM PDSIFFNAVINAFSEAG VEEAM+ F+KMKASGLRP TST
Sbjct: 121 QKRFKFIQSVILMVEENGMEPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTST 180

Query: 181 FNTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSI 240
           FNTLIKGYGIAGKPEET++LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+++
Sbjct: 181 FNTLIKGYGIAGKPEETIELLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENM 240

Query: 241 GSLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
            +LGIKPDAVTYNT+ATA+AQ+GET++AE++I  MQDN ++PNQ+TCSI+A GYCKE
Sbjct: 241 IALGIKPDAVTYNTIATAHAQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKE 297

[Close]

BLAST of MELO3C003585 vs. ExPASy TrEMBL
Match: A0A6J1CJL5 (pentatricopeptide repeat-containing protein At5g25630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011746 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 8.9e-101
Identity = 185/226 (81.86%), Postives = 210/226 (92.92%), Query Frame = 0


Query: 71  IVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVI 130
           +VRS+TKLMNILIERGKPQ AQN+FDNLIA+GHRPSLVTYT+LL+ALTVQKRFK I SVI
Sbjct: 1   MVRSKTKLMNILIERGKPQEAQNVFDNLIADGHRPSLVTYTTLLSALTVQKRFKFIQSVI 60

Query: 131 QMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIA 190
            MVEE GM PDSIFFNAVINAFSEAG VEEAM+ F+KMKASGLRP TSTFNTLIKGYGIA
Sbjct: 61  LMVEENGMEPDSIFFNAVINAFSEAGNVEEAMIAFQKMKASGLRPSTSTFNTLIKGYGIA 120

Query: 191 GKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVT 250
           GKPEET++LLDLMYREE LKPNLRTCNVLVRAWCKKKKI EAWNVV+++ +LGIKPDAVT
Sbjct: 121 GKPEETIELLDLMYREETLKPNLRTCNVLVRAWCKKKKIPEAWNVVENMIALGIKPDAVT 180

Query: 251 YNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           YNT+ATA+AQ+GET++AE++I  MQDN ++PNQ+TCSI+A GYCKE
Sbjct: 181 YNTIATAHAQSGETDQAEKMILQMQDNGIRPNQRTCSIIACGYCKE 226

[Close]

BLAST of MELO3C003585 vs. ExPASy TrEMBL
Match: A0A5N6R833 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013343 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.3e-99
Identity = 185/296 (62.50%), Postives = 231/296 (78.04%), Query Frame = 0


Query: 1   MGESGDDEASYRTKNKHQIAPATVKKRWAPSVPVKDVSPYNQKKTHPTLSSEDVQSESSC 60
           MGESG ++A  RT  K Q    T+KK W  ++P+K+ S  ++ + + T  S D +++S C
Sbjct: 1   MGESGSEKAVSRTNRKDQAGTTTIKKGWVQALPIKEHSLGDKNQLYRTSKSTDSKNQSHC 60

Query: 61  LDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQ 120
             CT+  SC +VRSRTKLMNILIERGKPQ  Q+IFD+LI  GH+PSL+TYT+LL ALT+Q
Sbjct: 61  SFCTAKNSCRMVRSRTKLMNILIERGKPQEVQSIFDSLIEGGHKPSLITYTTLLAALTIQ 120

Query: 121 KRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTF 180
           KRFK I+S+I  VEE GM PDS+FFNAVINAFSE+G +EEAM TF +MK SGL+P T T+
Sbjct: 121 KRFKSIHSIISQVEENGMKPDSVFFNAVINAFSESGNIEEAMETFWEMKKSGLKPTTITY 180

Query: 181 NTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIG 240
           N LIKGYGIAGKP E+++LLDLM +E N+KPNLRT NVLVRAWCKK  I EAWN+V  I 
Sbjct: 181 NALIKGYGIAGKPAESLKLLDLMSQEGNVKPNLRTYNVLVRAWCKKNNIVEAWNLVHKIV 240

Query: 241 SLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYCKE 297
           + G++PDAVTYNT++TAYAQNGET+RAE +I  MQ N VQPN++TC I+  GYCKE
Sbjct: 241 ACGMQPDAVTYNTISTAYAQNGETDRAEGMILEMQKNRVQPNERTCGIIISGYCKE 296

[Close]

BLAST of MELO3C003585 vs. TAIR 10
Match: AT5G21222.1 (protein kinase family protein )

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-75
Identity = 139/238 (58.40%), Postives = 179/238 (75.21%), Query Frame = 0


Query: 60  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 119
           C+ C+   +CG VRSRTKLMN LIERG+PQ A +IF+ LI EGH+PSL+TYT+L+TALT 
Sbjct: 307 CVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR 366

Query: 120 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 179
           QK F  + S+I  VE+ G+ PD+I FNA+INA SE+G +++AM  F KMK SG +P  ST
Sbjct: 367 QKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAST 426

Query: 180 FNTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSI 239
           FNTLIKGYG  GK EE+ +LLD+M R+E L+PN RTCN+LV+AWC ++KI EAWN+V  +
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486

Query: 240 GSLGIKPDAVTYNTLATAYAQNGETERAEE-IIQVMQDNNVQPNQQTCSIVAFGYCKE 297
            S G+KPD VT+NTLA AYA+ G T  AE+ II  M  N V+PN +TC  +  GYC+E
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544

[Close]

BLAST of MELO3C003585 vs. TAIR 10
Match: AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 279.3 bits (713), Expect = 3.7e-75
Identity = 140/241 (58.09%), Postives = 174/241 (72.20%), Query Frame = 0


Query: 60  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 119
           C  C    SC  VRSRTKLMN+LIERG+P  AQ +F  L   GHRPSL++YT+LL A+TV
Sbjct: 33  CKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92

Query: 120 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 179
           QK++  I S++  VE+ G   DSIFFNAVINAFSE+G +E+A+    KMK  GL P TST
Sbjct: 93  QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 180 FNTLIKGYGIAGKPEETVQLLDLMYREENLK--PNLRTCNVLVRAWCKKKKISEAWNVVQ 239
           +NTLIKGYGIAGKPE + +LLDLM  E N+   PN+RT NVLV+AWCKKKK+ EAW VV+
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 240 SIGSLGIKPDAVTYNTLATAYAQNGETERAE-EIIQVM-QDNNVQPNQQTCSIVAFGYCK 297
            +   G++PD VTYNT+AT Y Q GET RAE E+++ M      +PN +TC IV  GYC+
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

[Close]

BLAST of MELO3C003585 vs. TAIR 10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 279.3 bits (713), Expect = 3.7e-75
Identity = 140/241 (58.09%), Postives = 174/241 (72.20%), Query Frame = 0


Query: 60  CLDCTSSESCGIVRSRTKLMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTV 119
           C  C    SC  VRSRTKLMN+LIERG+P  AQ +F  L   GHRPSL++YT+LL A+TV
Sbjct: 33  CKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92

Query: 120 QKRFKCIYSVIQMVEEKGMIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITST 179
           QK++  I S++  VE+ G   DSIFFNAVINAFSE+G +E+A+    KMK  GL P TST
Sbjct: 93  QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 180 FNTLIKGYGIAGKPEETVQLLDLMYREENLK--PNLRTCNVLVRAWCKKKKISEAWNVVQ 239
           +NTLIKGYGIAGKPE + +LLDLM  E N+   PN+RT NVLV+AWCKKKK+ EAW VV+
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 240 SIGSLGIKPDAVTYNTLATAYAQNGETERAE-EIIQVM-QDNNVQPNQQTCSIVAFGYCK 297
            +   G++PD VTYNT+AT Y Q GET RAE E+++ M      +PN +TC IV  GYC+
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

[Close]

BLAST of MELO3C003585 vs. TAIR 10
Match: AT1G62720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-26
Identity = 68/209 (32.54%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 86  GKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKGMIPDSIFF 145
           G    A  +FD +  +G R   VTY SL+  L    R+     +++ +  + ++P+ I F
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247

Query: 146 NAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQLLDLMYR 205
            AVI+ F + GK  EAM  + +M    + P   T+N+LI G  + G+ +E  Q+LDLM  
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307

Query: 206 EENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNGETE 265
           +  L P++ T N L+  +CK K++ E   + + +   G+  D +TYNT+   Y Q G  +
Sbjct: 308 KGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 367

Query: 266 RAEEIIQVMQDNNVQPNQQTCSIVAFGYC 295
            A+EI   M     +PN +T SI+ +G C
Sbjct: 368 AAQEIFSRMDS---RPNIRTYSILLYGLC 392

[Close]

BLAST of MELO3C003585 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-25
Identity = 63/217 (29.03%), Postives = 121/217 (55.76%), Query Frame = 0


Query: 78  LMNILIERGKPQGAQNIFDNLIAEGHRPSLVTYTSLLTALTVQKRFKCIYSVIQMVEEKG 137
           +++ L + G    A ++F+ +  +G +  +VTY+SL+  L    ++     +++ +  + 
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 138 MIPDSIFFNAVINAFSEAGKVEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETV 197
           +IPD + F+A+I+ F + GK+ EA   + +M   G+ P T T+N+LI G+       E  
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370

Query: 198 QLLDLMYREENLKPNLRTCNVLVRAWCKKKKISEAWNVVQSIGSLGIKPDAVTYNTLATA 257
           Q+ DLM   +  +P++ T ++L+ ++CK K++ +   + + I S G+ P+ +TYNTL   
Sbjct: 371 QMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 430

Query: 258 YAQNGETERAEEIIQVMQDNNVQPNQQTCSIVAFGYC 295
           + Q+G+   A+E+ Q M    V P+  T  I+  G C
Sbjct: 431 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466

The following BLAST results are available for this feature:

BLAST of MELO3C003585 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038719.1	1.2e-163	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK31331...	[more]
XP_016903528.1	1.2e-163	100.00	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g...	[more]
XP_038898466.1	2.8e-141	87.16	pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Benincasa hisp...	[more]
XP_022141330.1	7.2e-129	80.13	pentatricopeptide repeat-containing protein At5g25630 isoform X1 [Momordica char...	[more]
XP_038898467.1	5.0e-106	89.45	pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Benincasa hisp...	[more]

BLAST of MELO3C003585 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9D1	1.8e-74	58.40	Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX...	[more]
Q8GZ63	5.2e-74	58.09	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]
Q76C99	5.3e-26	30.73	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]
Q9SI78	3.4e-25	32.54	Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana OX...	[more]
Q6NQ83	1.7e-24	29.03	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]

BLAST of MELO3C003585 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E700	5.7e-164	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E5M4	5.7e-164	100.00	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 OS=Cu...	[more]
A0A6J1CHS1	3.5e-129	80.13	pentatricopeptide repeat-containing protein At5g25630 isoform X1 OS=Momordica ch...	[more]
A0A6J1CJL5	8.9e-101	81.86	pentatricopeptide repeat-containing protein At5g25630 isoform X2 OS=Momordica ch...	[more]
A0A5N6R833	1.3e-99	62.50	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013343 PE=4 SV=1	[more]

BLAST of MELO3C003585 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21222.1	1.3e-75	58.40	protein kinase family protein	[more]
AT5G25630.1	3.7e-75	58.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	3.7e-75	58.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62720.1	2.4e-26	32.54	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G22470.1	1.2e-25	29.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 249..282 e-value: 2.7E-7 score: 28.3 coord: 145..175 e-value: 4.2E-7 score: 27.7 coord: 215..248 e-value: 1.6E-5 score: 22.7 coord: 179..212 e-value: 2.4E-7 score: 28.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 246..295 e-value: 1.1E-10 score: 41.5 coord: 140..187 e-value: 3.5E-11 score: 43.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 215..243 e-value: 0.1 score: 12.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..175 score: 12.528824
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 212..246 score: 10.566751
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 247..281 score: 12.134216
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..211 score: 8.725252
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 189..298 e-value: 1.0E-28 score: 101.9 coord: 63..188 e-value: 3.7E-25 score: 90.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR47931:SF1	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..296
None	No IPR available	PANTHER	PTHR47931	OS01G0228400 PROTEIN	coord: 1..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003585.1	MELO3C003585.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding