MELO3C003554.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C003554.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionHomeobox-leucine zipper protein ATHB-6-like
Locationchr04: 2121145 .. 2122542 (+)
RNA-Seq ExpressionMELO3C003554.jh1
SyntenyMELO3C003554.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTCATCACTTAAATAAAAAAATATTAAAACATTATGTAAAAAATGTCAAATTTGTTTTACCAAAAGTTACAATAGGATGCATAAAGATAAATGGTGTTGTTTTCTTTATCTCGGTTATTTATTTTGATCCATCATGGTGATCATGATTAACTAATAATTAAAAAGATATATGAAATTCATTTTTCTTTTTTTTCTCTCTGCCATCCCACTTTAAAGGTTCTTCAAAGGTTCCATCTGAATTTCTTTTCAGCTAAATGCTTGGGTTGTGTTTCCAAGAAGAAATTCAACAAATGAAACCCATCATTTTGGTTTCACCATAAAACTTCCACCATTTTCCCTTTTTGTTCTTCATTTTCAGTGATCATGAAGAGATTTAGCCACTCAGATTCCTTAGATTCCTTCATCTCCTTCTTCTCCCCCAAAGGTAAACAATCCTCAAAATCAGAAAGAGAAAAAAAAAAAATGATCTTTTGTATTTTTTGGGTTATAAAAGTTTTTTTTTTTTTTTATTCTTGTAGATCAGCAACCGAATTCCAAAGCCATAGGTGGTTACAGCAAGGAGTTTCAAGCAATGTTAGACAGTTTAGAGGAAGAAGACAACAGCGAAGACGGCGGGAGCAGTGGCGGTTCGGCACCGGAGAGGAAACGTCGGCTGAAACTGGATCAAGTGAAGGGTTTAGAGAGACATTTTGAAGTGGAAAACAAACTCGAACCCGACAGAAAAATGAAGATCGCAGCTGAATTAGAACTTGAACCGAGACAAGTTACGATTTGGTTCCAAAATCGAAGAGCTCGATGGAAAACCAAGCAATTAGAGAAAGATTATGGAGTTCTTAAACTAAATTATGATGCTCTTAAACTTGATTATGATGTTCTTGAAAAAGAAAATGCTTCTCTTGCTTCAAAGGTAATGATCAAAAGAAAAGAAAACCATCTCCATTTTCAACTTTGAAAACAAAACAAAAATTAATGGGTTTAGTTTATATTAATGAAAATTCTTTGCTTTCTTTTCTTTTCTTTTCTTTTCTTTGTTCTTATTGCAGGTGAAAGAGTTGAGGGAGAAAGTAAACAGAGCGATGAAAAAAGGGTCAATGGAGAGAGATTCAAACAGAGATGGGAATAATTCGTATATTTCAATGTTGAAGAATAATAATAATCAAATCCAATTTACAAAGGCTATGAATGAGGATCAAAGTTTGGTTAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCATTATTGGTAAAAAAAACAAATCCATATGATCAACGTTCTTCCATTTTATAACATTTTTATTTCTTGATCTTCATTTTGGTTCTTAGTTTTGGTCTTTTTCTTGTTTAAGAGTAATGGATATATGTACGTCTCATGCTAATGAAATGTATAGTTAAGA

mRNA sequence

TTTTTTCATCACTTAAATAAAAAAATATTAAAACATTATGTAAAAAATGTCAAATTTGTTTTACCAAAAGTTACAATAGGATGCATAAAGATAAATGGTGTTGTTTTCTTTATCTCGGTTATTTATTTTGATCCATCATGGTGATCATGATTAACTAATAATTAAAAAGATATATGAAATTCATTTTTCTTTTTTTTCTCTCTGCCATCCCACTTTAAAGGTTCTTCAAAGGTTCCATCTGAATTTCTTTTCAGCTAAATGCTTGGGTTGTGTTTCCAAGAAGAAATTCAACAAATGAAACCCATCATTTTGGTTTCACCATAAAACTTCCACCATTTTCCCTTTTTGTTCTTCATTTTCAGTGATCATGAAGAGATTTAGCCACTCAGATTCCTTAGATTCCTTCATCTCCTTCTTCTCCCCCAAAGATCAGCAACCGAATTCCAAAGCCATAGGTGGTTACAGCAAGGAGTTTCAAGCAATGTTAGACAGTTTAGAGGAAGAAGACAACAGCGAAGACGGCGGGAGCAGTGGCGGTTCGGCACCGGAGAGGAAACGTCGGCTGAAACTGGATCAAGTGAAGGGTTTAGAGAGACATTTTGAAGTGGAAAACAAACTCGAACCCGACAGAAAAATGAAGATCGCAGCTGAATTAGAACTTGAACCGAGACAAGTTACGATTTGGTTCCAAAATCGAAGAGCTCGATGGAAAACCAAGCAATTAGAGAAAGATTATGGAGTTCTTAAACTAAATTATGATGCTCTTAAACTTGATTATGATGTTCTTGAAAAAGAAAATGCTTCTCTTGCTTCAAAGGTGAAAGAGTTGAGGGAGAAAGTAAACAGAGCGATGAAAAAAGGGTCAATGGAGAGAGATTCAAACAGAGATGGGAATAATTCGTATATTTCAATGTTGAAGAATAATAATAATCAAATCCAATTTACAAAGGCTATGAATGAGGATCAAAGTTTGGTTAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCATTATTGGTAAAAAAAACAAATCCATATGATCAACGTTCTTCCATTTTATAACATTTTTATTTCTTGATCTTCATTTTGGTTCTTAGTTTTGGTCTTTTTCTTGTTTAAGAGTAATGGATATATGTACGTCTCATGCTAATGAAATGTATAGTTAAGA

Coding sequence (CDS)

ATGAAGAGATTTAGCCACTCAGATTCCTTAGATTCCTTCATCTCCTTCTTCTCCCCCAAAGATCAGCAACCGAATTCCAAAGCCATAGGTGGTTACAGCAAGGAGTTTCAAGCAATGTTAGACAGTTTAGAGGAAGAAGACAACAGCGAAGACGGCGGGAGCAGTGGCGGTTCGGCACCGGAGAGGAAACGTCGGCTGAAACTGGATCAAGTGAAGGGTTTAGAGAGACATTTTGAAGTGGAAAACAAACTCGAACCCGACAGAAAAATGAAGATCGCAGCTGAATTAGAACTTGAACCGAGACAAGTTACGATTTGGTTCCAAAATCGAAGAGCTCGATGGAAAACCAAGCAATTAGAGAAAGATTATGGAGTTCTTAAACTAAATTATGATGCTCTTAAACTTGATTATGATGTTCTTGAAAAAGAAAATGCTTCTCTTGCTTCAAAGGTGAAAGAGTTGAGGGAGAAAGTAAACAGAGCGATGAAAAAAGGGTCAATGGAGAGAGATTCAAACAGAGATGGGAATAATTCGTATATTTCAATGTTGAAGAATAATAATAATCAAATCCAATTTACAAAGGCTATGAATGAGGATCAAAGTTTGGTTAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCATTATTGGTAA

Protein sequence

MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Homology
[Close]
BLAST of MELO3C003554.jh1 vs. NCBI nr
Match: KAA0038691.1 (homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 420 bits (1080), Expect = 5.60e-148
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180

Query: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217

[Close]
BLAST of MELO3C003554.jh1 vs. NCBI nr
Match: XP_008466655.1 (PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302.1 homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1068), Expect = 3.92e-146
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERD-SNRDGNNSY 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERD SNRDGNNSY
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 218

[Close]
BLAST of MELO3C003554.jh1 vs. NCBI nr
Match: XP_004136274.1 (homeobox-leucine zipper protein ATHB-6 [Cucumis sativus] >KGN60232.1 hypothetical protein Csa_001001 [Cucumis sativus])

HSP 1 Score: 393 bits (1009), Expect = 3.48e-137
Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQ NSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQQNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180
           KDY VLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSME+DSNRDGN SYI
Sbjct: 121 KDYEVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMEKDSNRDGN-SYI 180

Query: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           SML N+NNQ QFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 SML-NSNNQFQFTKAMNEDQSLVNFCSVDQAPSLHYW 215

[Close]
BLAST of MELO3C003554.jh1 vs. NCBI nr
Match: XP_038896275.1 (homeobox-leucine zipper protein ATHB-6-like isoform X2 [Benincasa hispida])

HSP 1 Score: 335 bits (860), Expect = 3.66e-114
Identity = 190/238 (79.83%), Postives = 200/238 (84.03%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRF HS+SLDSFISFFSP +QQ +SK IG YSKEFQAMLDSLEEEDNSEDG S GGSAP
Sbjct: 1   MKRFGHSESLDSFISFFSPNEQQ-SSKTIGAYSKEFQAMLDSLEEEDNSEDGSSGGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKR LKLDQVK LERHFEVENKLEP+RKM+IAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRLLKLDQVKALERHFEVENKLEPERKMRIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRA---------MKKGSMERDS 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNR          ++ GSME+DS
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREGTEMKIQREVRNGSMEKDS 180

Query: 181 NRDGNNSYISML-------KNNNNQIQFTKAMNEDQSLVN------FCSVDQAPSLHY 216
           NRDGN SYISML       K   NQ QFTKAMNEDQSL+N      FCSVDQAPSLH+
Sbjct: 181 NRDGN-SYISMLNCFEFSGKVYENQNQFTKAMNEDQSLINTEEPCNFCSVDQAPSLHW 236

[Close]
BLAST of MELO3C003554.jh1 vs. NCBI nr
Match: XP_038896274.1 (homeobox-leucine zipper protein ATHB-6-like isoform X1 [Benincasa hispida])

HSP 1 Score: 329 bits (844), Expect = 1.19e-111
Identity = 190/243 (78.19%), Postives = 200/243 (82.30%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRF HS+SLDSFISFFSP +QQ +SK IG YSKEFQAMLDSLEEEDNSEDG S GGSAP
Sbjct: 1   MKRFGHSESLDSFISFFSPNEQQ-SSKTIGAYSKEFQAMLDSLEEEDNSEDGSSGGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKR LKLDQVK LERHFEVENKLEP+RKM+IAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRLLKLDQVKALERHFEVENKLEPERKMRIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASK-----VKELREKVNRA---------MKKGS 180
           KDYGVLKLNYDALKLDYDVLEKENASLASK     VKELREKVNR          ++ GS
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKEILWQVKELREKVNREGTEMKIQREVRNGS 180

Query: 181 MERDSNRDGNNSYISML-------KNNNNQIQFTKAMNEDQSLVN------FCSVDQAPS 216
           ME+DSNRDGN SYISML       K   NQ QFTKAMNEDQSL+N      FCSVDQAPS
Sbjct: 181 MEKDSNRDGN-SYISMLNCFEFSGKVYENQNQFTKAMNEDQSLINTEEPCNFCSVDQAPS 240

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.1e-36
Identity = 88/164 (53.66%), Postives = 119/164 (72.56%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISF---FSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNS--EDGGSS 60
           MKR S SDS+   IS     S  +Q P  +  GG  +EFQ+ML+  EEE+ +  E+ G  
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSP--RRYGG--REFQSMLEGYEEEEEAIVEERGHV 61

Query: 61  GGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWK 120
           G S  E+KRRL ++QVK LE++FE+ENKLEP+RK+K+A EL L+PRQV +WFQNRRARWK
Sbjct: 62  GLS--EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 121

Query: 121 TKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVN 160
           TKQLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +L+ K+N
Sbjct: 122 TKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLN 159

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-34
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEED---NSEDGGSSGG 60
           MKR S SDS+   IS  S  +Q P      GY   +Q+ML+  +E+        G     
Sbjct: 1   MKRLSSSDSMCGLIS-TSTDEQSPR-----GYGSNYQSMLEGYDEDATLIEEYSGNHHHM 60

Query: 61  SAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTK 120
              E+KRRLK+DQVK LE++FE+ENKLEP+RK K+A EL L+PRQV +WFQNRRARWKTK
Sbjct: 61  GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVN 160
           QLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +++ KVN
Sbjct: 121 QLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVN 156

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 87/171 (50.88%), Postives = 118/171 (69.01%), Query Frame = 0 

Query: 7   SDSLDSFISF-FSPKDQQ--PNSKAIG---GYSKEFQAMLDSLEEEDNSEDGGSSG---G 66
           SDSL  F+    S  D+Q  P     G     + ++  M D+LE++ + ED G  G    
Sbjct: 8   SDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASS 67

Query: 67  SAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTK 126
           +A E+KRRL ++QVK LE++FE++NKLEP+RK+K+A EL L+PRQV IWFQNRRARWKTK
Sbjct: 68  TAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTK 127

Query: 127 QLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSME 169
           QLE+DYGVLK N+DALK + D L+++N SL  ++KEL+ K+N    KG  E
Sbjct: 128 QLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEE 178

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.9e-29
Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 0 

Query: 22  QQPNSKAIGGYSKEFQAMLDS---------LEEEDNSEDGGSSGGSAPERKRRLKLDQVK 81
           ++P     GG S     M +S         +E E + E+   + G   E+KRRL ++QV+
Sbjct: 2   KRPGGAGGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGGGGEKKRRLSVEQVR 61

Query: 82  GLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDA 141
            LER FEVENKLEP+RK ++A +L L+PRQV +WFQNRRARWKTKQLE+DY  L+ +YD+
Sbjct: 62  ALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDS 121

Query: 142 LKLDYDVLEKENASLASKVKELREKV 159
           L+LD+D L ++  +L +++KEL+ K+
Sbjct: 122 LRLDHDALRRDKDALLAEIKELKAKL 147

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.9e-29
Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 0 

Query: 22  QQPNSKAIGGYSKEFQAMLDS---------LEEEDNSEDGGSSGGSAPERKRRLKLDQVK 81
           ++P     GG S     M +S         +E E + E+   + G   E+KRRL ++QV+
Sbjct: 2   KRPGGAGGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGGGGEKKRRLSVEQVR 61

Query: 82  GLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDA 141
            LER FEVENKLEP+RK ++A +L L+PRQV +WFQNRRARWKTKQLE+DY  L+ +YD+
Sbjct: 62  ALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDS 121

Query: 142 LKLDYDVLEKENASLASKVKELREKV 159
           L+LD+D L ++  +L +++KEL+ K+
Sbjct: 122 LRLDHDALRRDKDALLAEIKELKAKL 147

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TAR1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002330 PE=4 SV=1)

HSP 1 Score: 420 bits (1080), Expect = 2.71e-148
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180

Query: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E5X1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006000 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 1.90e-146
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERD-SNRDGNNSY 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERD SNRDGNNSY
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 218

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CRT3 (homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504010 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 1.90e-146
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERD-SNRDGNNSY 180
           KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERD SNRDGNNSY
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 218

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LHK6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889880 PE=4 SV=1)

HSP 1 Score: 393 bits (1009), Expect = 1.68e-137
Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           MKRFSHSDSLDSFISFFSPKDQQ NSK IGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQQNSKGIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180
           KDY VLKLNYDALKLDYDVLEKENASLASKVKELREKVNR MKKGSME+DSNRDGN SYI
Sbjct: 121 KDYEVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREMKKGSMEKDSNRDGN-SYI 180

Query: 181 SMLKNNNNQIQFTKAMNEDQSLVNFCSVDQAPSLHYW 217
           SML N+NNQ QFTKAMNEDQSLVNFCSVDQAPSLHYW
Sbjct: 181 SML-NSNNQFQFTKAMNEDQSLVNFCSVDQAPSLHYW 215

[Close]
BLAST of MELO3C003554.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FIN2 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC111446073 PE=4 SV=1)

HSP 1 Score: 302 bits (774), Expect = 2.24e-101
Identity = 171/238 (71.85%), Postives = 188/238 (78.99%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60
           M RF  S+SLDSF S F+PK+Q P+S  IGGYSKEFQAMLDSLEEEDNSEDGG S GSAP
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQ-PSSTTIGGYSKEFQAMLDSLEEEDNSEDGGGSSGSAP 61

Query: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120
           ERKRRLK DQVK LERHFEVENKLEP+RKMKIA ELELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 62  ERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLE 121

Query: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180
           +DYGVLK NYDALKLDYDVLEKENASLASKV+ELREKV+R   K  ++R+  +D  NS++
Sbjct: 122 RDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQREL-KDEKNSFV 181

Query: 181 SMLKNNN----------------NQIQFTKAMNEDQSLVN------FCSVDQAPSLHY 216
           S   N++                NQ QFTKAMNEDQSL N      FCSVDQAPSLH+
Sbjct: 182 STNNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]
BLAST of MELO3C003554.jh1 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-37
Identity = 88/164 (53.66%), Postives = 119/164 (72.56%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISF---FSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNS--EDGGSS 60
           MKR S SDS+   IS     S  +Q P  +  GG  +EFQ+ML+  EEE+ +  E+ G  
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSP--RRYGG--REFQSMLEGYEEEEEAIVEERGHV 61

Query: 61  GGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWK 120
           G S  E+KRRL ++QVK LE++FE+ENKLEP+RK+K+A EL L+PRQV +WFQNRRARWK
Sbjct: 62  GLS--EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 121

Query: 121 TKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVN 160
           TKQLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +L+ K+N
Sbjct: 122 TKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLN 159

[Close]
BLAST of MELO3C003554.jh1 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 148.3 bits (373), Expect = 7.2e-36
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 0 

Query: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEED---NSEDGGSSGG 60
           MKR S SDS+   IS  S  +Q P      GY   +Q+ML+  +E+        G     
Sbjct: 1   MKRLSSSDSMCGLIS-TSTDEQSPR-----GYGSNYQSMLEGYDEDATLIEEYSGNHHHM 60

Query: 61  SAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTK 120
              E+KRRLK+DQVK LE++FE+ENKLEP+RK K+A EL L+PRQV +WFQNRRARWKTK
Sbjct: 61  GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTK 120

Query: 121 QLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVN 160
           QLEKDYGVLK  YD+L+ ++D L ++N SL  ++ +++ KVN
Sbjct: 121 QLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVN 156

[Close]
BLAST of MELO3C003554.jh1 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 87/171 (50.88%), Postives = 118/171 (69.01%), Query Frame = 0 

Query: 7   SDSLDSFISF-FSPKDQQ--PNSKAIG---GYSKEFQAMLDSLEEEDNSEDGGSSG---G 66
           SDSL  F+    S  D+Q  P     G     + ++  M D+LE++ + ED G  G    
Sbjct: 8   SDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASS 67

Query: 67  SAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTK 126
           +A E+KRRL ++QVK LE++FE++NKLEP+RK+K+A EL L+PRQV IWFQNRRARWKTK
Sbjct: 68  TAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTK 127

Query: 127 QLEKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSME 169
           QLE+DYGVLK N+DALK + D L+++N SL  ++KEL+ K+N    KG  E
Sbjct: 128 QLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEE 178

[Close]
BLAST of MELO3C003554.jh1 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 77/137 (56.20%), Postives = 105/137 (76.64%), Query Frame = 0 

Query: 35  EFQAMLDSLEEEDNSEDGGSSG---GSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMK 94
           ++  M D+LE++ + ED G  G    +A E+KRRL ++QVK LE++FE++NKLEP+RK+K
Sbjct: 24  DYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVK 83

Query: 95  IAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKV 154
           +A EL L+PRQV IWFQNRRARWKTKQLE+DYGVLK N+DALK + D L+++N SL  ++
Sbjct: 84  LAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQI 143

Query: 155 KELREKVNRAMKKGSME 169
           KEL+ K+N    KG  E
Sbjct: 144 KELKAKLNVEGVKGIEE 160

[Close]
BLAST of MELO3C003554.jh1 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 0 

Query: 45  EEDNSEDGGSSGGSAPERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVT 104
           EED S+DG   G    E+KRRL ++QVK LE++FE+ NKLEP+RKM++A  L L+PRQ+ 
Sbjct: 72  EEDYSDDGSQMG----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIA 131

Query: 105 IWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLASKV-----KELREKVN 164
           IWFQNRRARWKTKQLEKDY  LK  +D LK + D+L+  N  L +++     +E  E +N
Sbjct: 132 IWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESIN 191

Query: 165 RAMKKGSMERDSNRDGNNS 179
             + K +    SNR  N+S
Sbjct: 192 --LNKETEGSCSNRSDNSS 204

The following BLAST results are available for this feature:
BLAST of MELO3C003554.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038691.15.60e-148100.00homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa][more]
XP_008466655.13.92e-14699.54PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302.... [more]
XP_004136274.13.48e-13795.85homeobox-leucine zipper protein ATHB-6 [Cucumis sativus] >KGN60232.1 hypothetica... [more]
XP_038896275.13.66e-11479.83homeobox-leucine zipper protein ATHB-6-like isoform X2 [Benincasa hispida][more]
XP_038896274.11.19e-11178.19homeobox-leucine zipper protein ATHB-6-like isoform X1 [Benincasa hispida][more]
BLAST of MELO3C003554.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P466684.1e-3653.66Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6... [more]
Q940J11.0e-3451.23Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
P466671.7e-3450.88Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5... [more]
Q9XH372.9e-2946.58Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H... [more]
Q6K4982.9e-2946.58Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
BLAST of MELO3C003554.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TAR12.71e-148100.00Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3E5X11.90e-14699.54Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CRT31.90e-14699.54homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504... [more]
A0A0A0LHK61.68e-13795.85Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889880 PE... [more]
A0A6J1FIN22.24e-10171.85homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of MELO3C003554.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G22430.12.9e-3753.66homeobox protein 6 [more]
AT4G40060.17.2e-3651.23homeobox protein 16 [more]
AT5G65310.11.2e-3550.88homeobox protein 5 [more]
AT5G65310.21.6e-3556.20homeobox protein 5 [more]
AT1G69780.11.6e-2750.36Homeobox-leucine zipper protein family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..164
NoneNo IPR availableGENE3D1.10.10.60coord: 28..121
e-value: 1.0E-17
score: 66.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..66
NoneNo IPR availablePANTHERPTHR24326HOMEOBOX-LEUCINE ZIPPER PROTEINcoord: 5..206
NoneNo IPR availablePANTHERPTHR24326:SF535HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6coord: 5..206
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 60..121
e-value: 4.3E-16
score: 69.5
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 63..115
e-value: 3.4E-15
score: 55.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 57..117
score: 16.147139
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 62..118
e-value: 3.51928E-13
score: 60.3349
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 117..158
e-value: 9.7E-16
score: 57.7
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 92..115
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 49..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003554.jh1.t1MELO3C003554.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0043565 sequence-specific DNA binding