MELO3C003411.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C003411.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 867415 .. 868135 (-)
RNA-Seq ExpressionMELO3C003411.jh1
SyntenyMELO3C003411.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAACCCAAAAGCCAACCTTGAATTCTCTATGCATATGGAATTCACTATATTTCCAATTCATAATTCTCAATGAGTCATGTCTCCTTTCTCTCTTAATCTCTCTCAATCTCTCTCTCTCTCTTGATTATATATTCCAAGAGGAGCTCCATAGAATTACAACAAACCCTAAACACAATAATATTCATTGTTATTGAGTAAATTCTTTTTGGTTTAATGACCATGAATTGTCTTGCATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCAAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGAGGTTCCATTTTTGTTCATTAATTTCCCCCTTTCTCATGATCTCTTTGCTTCTCTTTATTTTTCTTTTTTCTTCTCATTTATGTGTTTGTAATTTTCTTGTGTTTATATTTCATTTTAAGTTTTAATGTAAATTGGAAGTTGAATAATAATATTCAAACTTGAGGTGGGAAA

mRNA sequence

CCAACCCAAAAGCCAACCTTGAATTCTCTATGCATATGGAATTCACTATATTTCCAATTCATAATTCTCAATGAGTCATGTCTCCTTTCTCTCTTAATCTCTCTCAATCTCTCTCTCTCTCTTGATTATATATTCCAAGAGGAGCTCCATAGAATTACAACAAACCCTAAACACAATAATATTCATTGTTATTGAGTAAATTCTTTTTGGTTTAATGACCATGAATTGTCTTGCATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCAAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGAGGTTCCATTTTTGTTCATTAATTTCCCCCTTTCTCATGATCTCTTTGCTTCTCTTTATTTTTCTTTTTTCTTCTCATTTATGTGTTTGTAATTTTCTTGTGTTTATATTTCATTTTAAGTTTTAATGTAAATTGGAAGTTGAATAATAATATTCAAACTTGAGGTGGGAAA

Coding sequence (CDS)

ATGACCATGAATTGTCTTGCATGCCAAGCCCTTCCAAGAACCCAATCTGACAGGGAGAATAATCATGGCTATGAAACCCCCTCTAGTAGAGGTAAATCATGTTGCCTGTACGTCCCACGGAGGTGGTCGGCCGAATTGACTCCCCACAACCCGATCAAACTCGATGAGGATATTAGCTCTTCTGATCTCCACAAGAAGCCAAGGAGCCGTCGTGCTCGTAGTGGCGATTACGGTGGGAACGAGCCGAGGTTGGTGAGAAGTTCGGGAATGAGAAGGGATTGGAGTTTTGAGGATTTGGGATTGAGAGATCATCAAAAGAAAGGGAGATTCCATTGA

Protein sequence

MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Homology
BLAST of MELO3C003411.jh1 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (606), Expect = 3.60e-79
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           MTMNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60

Query: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111

BLAST of MELO3C003411.jh1 vs. NCBI nr
Match: XP_008465978.2 (PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncharacterized protein E5676_scaffold455G004480 [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (596), Expect = 1.13e-77
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0

Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

BLAST of MELO3C003411.jh1 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus])

HSP 1 Score: 170 bits (430), Expect = 2.68e-52
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED 60
           MTMNCL CQALPRTQSDREN  GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRENR-GYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDD 60

Query: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
             ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  HHISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 113

BLAST of MELO3C003411.jh1 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus])

HSP 1 Score: 166 bits (420), Expect = 8.42e-51
Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 0

Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED-- 62
           MNCL CQALPRTQSDREN  GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D  
Sbjct: 1   MNCLTCQALPRTQSDRENR-GYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDDHH 60

Query: 63  ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  ISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 111

BLAST of MELO3C003411.jh1 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida])

HSP 1 Score: 163 bits (413), Expect = 9.22e-50
Identity = 89/113 (78.76%), Postives = 94/113 (83.19%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP--HNPIKLDEDI 60
           M+MNCL CQALPRTQSDREN HGYET SSRGKSCCLYV RRWSAELTP  +  IK D+DI
Sbjct: 1   MSMNCLTCQALPRTQSDREN-HGYETSSSRGKSCCLYVSRRWSAELTPPSYESIKNDDDI 60

Query: 61  SSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           SSS L KK ++RR  S D G NEPRLVRSSGMRRDWSFEDLGLRD QKK RFH
Sbjct: 61  SSS-LQKKAKNRRVHS-DCGRNEPRLVRSSGMRRDWSFEDLGLRD-QKKVRFH 109

BLAST of MELO3C003411.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1)

HSP 1 Score: 238 bits (606), Expect = 1.74e-79
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           MTMNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS
Sbjct: 1   MTMNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60

Query: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  SDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111

BLAST of MELO3C003411.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1)

HSP 1 Score: 234 bits (596), Expect = 5.48e-78
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0

Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

BLAST of MELO3C003411.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1)

HSP 1 Score: 234 bits (596), Expect = 5.48e-78
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0

Query: 3   MNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 62
           MNCL CQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD
Sbjct: 1   MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISSSD 60

Query: 63  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
           LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH
Sbjct: 61  LHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 109

BLAST of MELO3C003411.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1)

HSP 1 Score: 170 bits (430), Expect = 1.30e-52
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP---HNPIKLDED 60
           MTMNCL CQALPRTQSDREN  GYETPS+RGKSCCLYVPRRWS ELT    ++ IK+D+D
Sbjct: 1   MTMNCLTCQALPRTQSDRENR-GYETPSTRGKSCCLYVPRRWSTELTTPSSYDSIKIDDD 60

Query: 61  --ISSSDLHKKPRSRRARSGDYGGNEPRLVRSSGMRRDWSFEDLGLRDHQKKGRFH 111
             ISSS++HKK R+RR RS + GGNEP+LVRSSGMRRDWSFEDLGLR  QKKGRFH
Sbjct: 61  HHISSSNVHKKARTRRVRS-ECGGNEPKLVRSSGMRRDWSFEDLGLRG-QKKGRFH 113

BLAST of MELO3C003411.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1)

HSP 1 Score: 134 bits (336), Expect = 4.13e-38
Identity = 81/128 (63.28%), Postives = 87/128 (67.97%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENN----HGYETPSSRG--KSCCLYVPRRWSAELTP--HNPI 60
           M+MNCL CQALPRTQSDRENN    + YET SSRG  KSCCL+V RRWSAELTP  +  I
Sbjct: 1   MSMNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYGHI 60

Query: 61  KLDEDIS-------SSDLHKKPRSRRARSGDYGG--NEPRLVRSSGMRRDWSFEDLGLRD 111
           K   D +        S   KK + R  RSG      NEPRLVRSSGMRRDWSFEDL LRD
Sbjct: 61  KTTADNAREGCSSRKSFSDKKVKDRYLRSGSMNEKENEPRLVRSSGMRRDWSFEDLRLRD 120

BLAST of MELO3C003411.jh1 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHG------YETPSSRGKSCCL--YVPRRWSAELTPHNPI 60
           M++NCL+CQALPRT S+++ +         E  +  GK+CC+     R WS  L+P    
Sbjct: 1   MSLNCLSCQALPRTDSNKDVDLSGPGPPRVEINNVLGKTCCVNPIGGRNWSGNLSPRIYE 60

Query: 61  KLDEDISSSDLHKKPRSRRAR----SGDYGGN---------EPRLVRSSGMRRDWSFEDL 108
           K+     SS  HK  + ++      SG  G +         +P+LVRS+G+RR+WSFE+L
Sbjct: 61  KIGRP-GSSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSFENL 120

BLAST of MELO3C003411.jh1 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 8.0e-07
Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 1   MTMNCLACQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPHNPIKLDEDISS 60
           M++NCLAC  L RT SDR+     ++      +   +               K+  + SS
Sbjct: 1   MSLNCLACHILQRTDSDRDMGSRKDSSFKENFATSAFE--------------KMVRNRSS 60

Query: 61  SDLHKKPRS--RRARSGD---YGG-NEPRLVRSSGMRRDWSFEDL 100
             + ++     RR  S D   YG  +EP+LVRSSG+RRDWSFEDL
Sbjct: 61  LPVVRRVNKGHRRLYSADIMVYGELDEPKLVRSSGIRRDWSFEDL 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038574.13.60e-7999.10uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa][more]
XP_008465978.21.13e-7799.08PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncha... [more]
KGN60385.12.68e-5276.72hypothetical protein Csa_002007 [Cucumis sativus][more]
XP_031737602.18.42e-5176.32uncharacterized protein LOC116402474 [Cucumis sativus][more]
XP_038887010.19.22e-5078.76uncharacterized protein LOC120077178 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T5461.74e-7999.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E5T45.48e-7899.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CRL35.48e-7899.08uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=... [more]
A0A0A0LEC01.30e-5276.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1[more]
A0A6J1DZN24.13e-3863.28uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
Match NameE-valueIdentityDescription
AT5G46770.11.2e-1035.11unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT2G35215.18.0e-0736.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..89
NoneNo IPR availablePANTHERPTHR36019PLANT/PROTEINcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003411.jh1.t1MELO3C003411.jh1.t1mRNA