MELO3C003298 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATCATATATTCTTCCTCTTTTATTTGTTTATTTATTAAAATACCGGTCACTGGCTATTGCCAGTAAGAGGTCGCTCTTCCGGGGCTCTCGTGTGGCGGTAACAGTTGCATGTGTTACAGGTCGTTCCGGTTACTCCAAATCAATTCCCTTCTCTCCCTGGGTTGTTTCTTTTGAATTCTTTTCTCTTCTTCTATTCTCTCTCTCTCTCTCTCTCTCTCAGTCTTTGAAAAATCTCTGGTATTGATTCTCTTCTTTCCTTTCCGATTCCTTTTGGATCGGACGGCTTGCTTCATCTAAGGTAATCGATTCTCTCCTTTCCAGATCTCTTCTCGTCTTTGTTCGTTCTAATTTTAATCTGATTCTGTTTGTTTTTCCTGTATAATTATCGTCTGTTCTACCTAATTTCTTGCGTTTTTAAGGTCTTGTTGCGTTTTTCCTTCTAATTCTGTGGAGAATGATCGTTTTTTGAGCTATTTGTGCCGTTTTATTTATTTATTTATTATCTTAATAATTTATGCTGGAGTTGTTTTGAGTGAAGTGAAGAAACAAGTAGCAGTACGAGTTCAAGAGTTGAAGTTGTGGTAATTAATTACATTTTAGGTTTATTTTTCAGTTTAATGCTCTGTTAGCGATTTAACACAGGTGATTTTTCTTATGCGATAGACTTAGAGTCGACAGAATCTAGTTTTGCTTTATTGTATGTAGTTTTCTACTGTGAATTATCTGTAGCTGGCTGATTGTTAGTTTGTCGATTCTACAGATAGCTTTTAAAATTGAAATTTAGGGATTCTGGTCTCATTAAGGTCAAATATGTTCAAGAACATGTATAGTATTACTATTTACTTTTGTTTGCTTCTGGATGTCTGGATGTTCATGTTCGGCAGTCATTACGTATCATATAGACTTCGTGTTCCTTTGACTTTTGTGAAAACAGTTTCTAGAGGTTGCTTTCACTGCATTTGTGCACGTTGGCATGTACTTTTATGTTAGAAATTTTGTCTTTATTGTTTCCTGTACTGTTTGAGGTACTGCTCCTTAGTTTGGCTCAAATTGTTCTTGTCCTGATTTTCGTGCATGTAGGTTGTTGTTTCTTAAACTATAGGAGTTGTACTAACTTGCTGTATTGTTATACTGCTGCTCAACGAGTAGTTATTTTGTACAGGTCTTTGCCTTTCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGGTAGTTTTTTGCCTATTGTTCCACTACATGTCTCTTATGTTATTGGTCTGATGAAAGTTCCGTAAATTGTTCAGTTATGCCTGTCTGTGATCCATTGTTGGCATCTTTTTTTTTGAGTATCGAATTTCCAGCAAGTTTTTGACTTCCATTGATGTCTAATATTCACATACTTGGTTATGTGTATACAGTGTTTACAGGAATTTTGTAGTGACGGATCATAAATATCTCATTTCTTTTCAGAAAGGTTGGGAAGCGAAAGGCTGTTGTTAAAGCTGACAAGGGTACCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCAAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCCTGTTCGTATTTGTTCTCTGCCGTTTTGTCTTCATTTGTTTGATTTCCTTAAGAAGAAAAATTCTCTTATTTGGTTATATTTATACAACAGTGAGGAGTTCAGAAAGGAGTACAAAAGGGAAAATCCTAATGTGAAGGCAGTATCTGCAGTATGTGATCTGTGAAACTGATCTAATGATTCACATAATTCCCAATTGGTGATGCAAATATAGAGTAACTTACTAACATTTTCTCCACTCCTGCAGGTCGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTAAGTCACGCTGTAAGTATTATTGTGCATTACATAAAAATGAAAGCATGCTTAATCCTTGAGTTTTTTCCCTTTTTACTGCATGCATTTATGTATGATGATGAATGAAACACTGTTTATAGAGCTGTGGTATTCGTGTTGCTGCCAAATCTTGAAACCAGCGTCACTTTCAGCAATCTTGTATTGAATATCAAGTTGATACGTGTGTGCATGCTTTTTTTTCTTTGCCTTTTTCATTTTGTTGTGTTTTAATAATTTTTTTATGAGAAATCATAACTTTCATTGAGAAGAAAATGAAATAATATAAGAGCATACAAAAAAACCAATCCACAAAAAACAACTCAACTGAAGGAAGGGAGACCATCTGAAGGCAATGAAAGAATCACAACTTAATAGTTTTTCTGCCTCTGTATTGATATTTTCTTACATTTGGGCATTTACACTTTTATTCTCTCAACAGTATTTTACATTTTGCGTTTCTTTATATAATAACTTCTTAATGGTTTAAAAGGAAAAAGCACCATATGAAGCCAAGGCAGCTAAGAGGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGTAGTTGTGCTCTGTTTTTTTGTGTATTAATTAAATTTATAAGACATGACTCCAAACTTAAAGTGCTCATACACCTTTTTTCGGGAATATAGGCCAGCGCAGCAGATGACGAAGAATCAGAGAGGTCAAAATCTGAAGTGAATGACGAGGATGAGGCCAGTGAGGAGGTATTTTTTTAATACATAAGAAGGAAATGCTACAATGCTTGTTTTTAGAGCGTGTCTATGCATTTCAGTTCATAGTAAGCCAATTAAGATCCCTCTCTGCTGTTATTTATTTATTTTTTTTGAAGTTGAAAGTAACAAAAATTTATAGATCAGAGAACACTTTTGGATTAGTTGGTAATAATTTCATTTTCGCACCTTTAAATTTGTAACCATTTGGTTTATGGTCTTTAATAAGTAACAAATCTGATCTCCTTGCTTTATAATTTGTAAGAGTCTATTTCCTATCGTGAAAGCATCTAATCTTCAACGGTATATCAATAAAATTTCATTAAATCATGTCATTCTAAACTCTAGAGAGTAAATTGGTTCTTATTAAGGTTCAAGGACAATTAGTATTGCAACTCCCTCGCAGCCAACGCCAATAACAAGAATGCAATAGAAAGGGCATGGATTTGGTAAAAGTAGAATTAGGGTTTCATAAAATTTGACTATTAAACCACTTGCAGGAGCATCAAGAAGAGGATGATGAGGAGGACGAGGAAGATGATGAAGATGATGACTAAATTGAAAGCCAACTTGTTTGTATCGGCCAACCCAGCTGGTAGAGGGAGGAAGGTGATGTATGTTCATATATCTTTGCATGCTTTCTGTTCATTTTGTATTTGTGTGCAACATGATAACGTGTCAGAATATCTTTACTTGTTTTAATGGTCTCCTTCACTTTACATCCCCTTTGTCATATTACATTGTTAAAATCTTGGGGGTATTTTGGCCTTTCTTTTGATAACCAATATGAAATTATCAAATACATCTTTTGGAAGCTGTACTTCAA ATTCATCATATATTCTTCCTCTTTTATTTGTTTATTTATTAAAATACCGGTCACTGGCTATTGCCAGTAAGAGGTCGCTCTTCCGGGGCTCTCGTGTGGCGGTAACAGTTGCATGTGTTACAGGTCGTTCCGGTTACTCCAAATCAATTCCCTTCTCTCCCTGGGTTGTTTCTTTTGAATTCTTTTCTCTTCTTCTATTCTCTCTCTCTCTCTCTCTCTCTCAGTCTTTGAAAAATCTCTGGTATTGATTCTCTTCTTTCCTTTCCGATTCCTTTTGGATCGGACGGCTTGCTTCATCTAAGTTATTTTGTACAGGTCTTTGCCTTTCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGAAAGGTTGGGAAGCGAAAGGCTGTTGTTAAAGCTGACAAGGGTACCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCAAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCCTTGAGGAGTTCAGAAAGGAGTACAAAAGGGAAAATCCTAATGTGAAGGCAGTATCTGCAGTCGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTAAGTCACGCTGAAAAAGCACCATATGAAGCCAAGGCAGCTAAGAGGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGCCAGCGCAGCAGATGACGAAGAATCAGAGAGGTCAAAATCTGAAGTGAATGACGAGGATGAGGCCAGTGAGGAGGAGCATCAAGAAGAGGATGATGAGGAGGACGAGGAAGATGATGAAGATGATGACTAAATTGAAAGCCAACTTGTTTGTATCGGCCAACCCAGCTGGTAGAGGGAGGAAGGTGATGTATGTTCATATATCTTTGCATGCTTTCTGTTCATTTTGTATTTGTGTGCAACATGATAACGTGTCAGAATATCTTTACTTGTTTTAATGGTCTCCTTCACTTTACATCCCCTTTGTCATATTACATTGTTAAAATCTTGGGGGTATTTTGGCCTTTCTTTTGATAACCAATATGAAATTATCAAATACATCTTTTGGAAGCTGTACTTCAA ATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGAAAGGTTGGGAAGCGAAAGGCTGTTGTTAAAGCTGACAAGGGTACCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCAAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCCTTGAGGAGTTCAGAAAGGAGTACAAAAGGGAAAATCCTAATGTGAAGGCAGTATCTGCAGTCGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTAAGTCACGCTGAAAAAGCACCATATGAAGCCAAGGCAGCTAAGAGGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGCCAGCGCAGCAGATGACGAAGAATCAGAGAGGTCAAAATCTGAAGTGAATGACGAGGATGAGGCCAGTGAGGAGGAGCATCAAGAAGAGGATGATGAGGAGGACGAGGAAGATGATGAAGATGATGACTAA MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGTKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLMRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEEDDEEDEEDDEDDD Homology
BLAST of MELO3C003298 vs. NCBI nr
Match: XP_008449957.1 (PREDICTED: high mobility group B protein 1 [Cucumis melo] >XP_008449965.1 PREDICTED: high mobility group B protein 1 [Cucumis melo]) HSP 1 Score: 286.2 bits (731), Expect = 1.9e-73 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MELO3C003298 vs. NCBI nr
Match: XP_011653690.1 (high mobility group B protein 1 [Cucumis sativus] >XP_011653691.1 high mobility group B protein 1 [Cucumis sativus] >XP_031740703.1 high mobility group B protein 1 [Cucumis sativus] >KGN54377.1 hypothetical protein Csa_017866 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71 Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of MELO3C003298 vs. NCBI nr
Match: XP_038883904.1 (high mobility group B protein 1 [Benincasa hispida] >XP_038883905.1 high mobility group B protein 1 [Benincasa hispida] >XP_038883906.1 high mobility group B protein 1 [Benincasa hispida]) HSP 1 Score: 270.8 bits (691), Expect = 8.1e-69 Identity = 159/170 (93.53%), Postives = 167/170 (98.24%), Query Frame = 0
BLAST of MELO3C003298 vs. NCBI nr
Match: KAA0031875.1 (high mobility group B protein 1 [Cucumis melo var. makuwa] >TYK09515.1 high mobility group B protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of MELO3C003298 vs. NCBI nr
Match: XP_022151579.1 (high mobility group B protein 1 [Momordica charantia] >XP_022151580.1 high mobility group B protein 1 [Momordica charantia]) HSP 1 Score: 254.6 bits (649), Expect = 6.0e-64 Identity = 155/172 (90.12%), Postives = 165/172 (95.93%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy Swiss-Prot
Match: O49595 (High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 4.7e-43 Identity = 119/178 (66.85%), Postives = 141/178 (79.21%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy Swiss-Prot
Match: P26585 (HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-28 Identity = 92/163 (56.44%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27 Identity = 84/140 (60.00%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26 Identity = 88/169 (52.07%), Postives = 113/169 (66.86%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.2e-26 Identity = 82/161 (50.93%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy TrEMBL
Match: A0A1S3BML2 (high mobility group B protein 1 OS=Cucumis melo OX=3656 GN=LOC103491684 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.0e-74 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy TrEMBL
Match: A0A0A0L1B2 (HMG box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G309150 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71 Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy TrEMBL
Match: A0A5A7SRU9 (High mobility group B protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold994G00070 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 5.1e-69 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy TrEMBL
Match: A0A6J1DBK9 (high mobility group B protein 1 OS=Momordica charantia OX=3673 GN=LOC111019485 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.9e-64 Identity = 155/172 (90.12%), Postives = 165/172 (95.93%), Query Frame = 0
BLAST of MELO3C003298 vs. ExPASy TrEMBL
Match: A0A6J1ISM4 (high mobility group B protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478326 PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 6.1e-62 Identity = 146/170 (85.88%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of MELO3C003298 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 ) HSP 1 Score: 181.0 bits (458), Expect = 7.9e-46 Identity = 115/165 (69.70%), Postives = 136/165 (82.42%), Query Frame = 0
BLAST of MELO3C003298 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 ) HSP 1 Score: 175.6 bits (444), Expect = 3.3e-44 Identity = 119/178 (66.85%), Postives = 141/178 (79.21%), Query Frame = 0
BLAST of MELO3C003298 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 ) HSP 1 Score: 175.6 bits (444), Expect = 3.3e-44 Identity = 119/178 (66.85%), Postives = 141/178 (79.21%), Query Frame = 0
BLAST of MELO3C003298 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 ) HSP 1 Score: 172.2 bits (435), Expect = 3.7e-43 Identity = 119/183 (65.03%), Postives = 141/183 (77.05%), Query Frame = 0
BLAST of MELO3C003298 vs. TAIR 10
Match: AT1G20696.1 (high mobility group B3 ) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28 Identity = 84/140 (60.00%), Postives = 103/140 (73.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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