MELO3C003272 (gene) Melon (DHL92) v4

Overview
NameMELO3C003272
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr08: 32760888 .. 32761172 (+)
RNA-Seq ExpressionMELO3C003272
SyntenyMELO3C003272
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAACTGTGTGGGAGTTCACATCTGAGTCCGCTGGAGCGTAGACTCGCCAGAAGAAAGGGAGAAGAAGCTACACACGCCACCATTCAAGGCAAACGCCGGAATTCGCCGGAAATTGAAGTTGCCGACGCTCGTGGGTGCGATGCCGTCGTAACGCCGTCGAAGAAGAAAGGAACCTCCTTCGTGCGTGGGTTACGCCGGCGATGGTTGAGCAGCACCATCCAGTTCATTGAAGAACTCGCACCGCTGCCGAAACTGTTCCGCTTGGGTGTCGAATCGTAA

mRNA sequence

ATGTTGAAACTGTGTGGGAGTTCACATCTGAGTCCGCTGGAGCGTAGACTCGCCAGAAGAAAGGGAGAAGAAGCTACACACGCCACCATTCAAGGCAAACGCCGGAATTCGCCGGAAATTGAAGTTGCCGACGCTCGTGGGTGCGATGCCGTCGTAACGCCGTCGAAGAAGAAAGGAACCTCCTTCGTGCGTGGGTTACGCCGGCGATGGTTGAGCAGCACCATCCAGTTCATTGAAGAACTCGCACCGCTGCCGAAACTGTTCCGCTTGGGTGTCGAATCGTAA

Coding sequence (CDS)

ATGTTGAAACTGTGTGGGAGTTCACATCTGAGTCCGCTGGAGCGTAGACTCGCCAGAAGAAAGGGAGAAGAAGCTACACACGCCACCATTCAAGGCAAACGCCGGAATTCGCCGGAAATTGAAGTTGCCGACGCTCGTGGGTGCGATGCCGTCGTAACGCCGTCGAAGAAGAAAGGAACCTCCTTCGTGCGTGGGTTACGCCGGCGATGGTTGAGCAGCACCATCCAGTTCATTGAAGAACTCGCACCGCTGCCGAAACTGTTCCGCTTGGGTGTCGAATCGTAA

Protein sequence

MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGTSFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES
Homology
[Close]
BLAST of MELO3C003272 vs. NCBI nr
Match: KAA0062485.1 (uncharacterized protein E6C27_scaffold130G00790 [Cucumis melo var. makuwa] >TYK27399.1 uncharacterized protein E5676_scaffold325G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 188.0 bits (476), Expect = 3.8e-44
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 60
           MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT
Sbjct: 65  MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 124

Query: 61  SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 95
           SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES
Sbjct: 125 SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 158

[Close]
BLAST of MELO3C003272 vs. NCBI nr
Match: KGN54740.1 (hypothetical protein Csa_012420 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 5.0e-12
Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 0 

Query: 1  MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 60
          MLK CGSSHLSPLERRLARR+ EEAT ATIQGKR NSPEIEV DAR C       ++   
Sbjct: 1  MLKPCGSSHLSPLERRLARREEEEATQATIQGKRWNSPEIEVTDARECGYCRNAVEEDTN 60

Query: 61 SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 95
           F     R W+  T   +E+  P+ +  R   E+
Sbjct: 61 LF-----RAWV--TRAMVEQRHPVHRRARTAAET 87

[Close]
BLAST of MELO3C003272 vs. ExPASy TrEMBL
Match: A0A5A7V9C8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00830 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1   MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 60
           MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT
Sbjct: 65  MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 124

Query: 61  SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 95
           SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES
Sbjct: 125 SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 158

[Close]
BLAST of MELO3C003272 vs. ExPASy TrEMBL
Match: A0A0A0KYI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G439070 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.4e-12
Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 0 

Query: 1  MLKLCGSSHLSPLERRLARRKGEEATHATIQGKRRNSPEIEVADARGCDAVVTPSKKKGT 60
          MLK CGSSHLSPLERRLARR+ EEAT ATIQGKR NSPEIEV DAR C       ++   
Sbjct: 1  MLKPCGSSHLSPLERRLARREEEEATQATIQGKRWNSPEIEVTDARECGYCRNAVEEDTN 60

Query: 61 SFVRGLRRRWLSSTIQFIEELAPLPKLFRLGVES 95
           F     R W+  T   +E+  P+ +  R   E+
Sbjct: 61 LF-----RAWV--TRAMVEQRHPVHRRARTAAET 87

The following BLAST results are available for this feature:
BLAST of MELO3C003272 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062485.13.8e-44100.00uncharacterized protein E6C27_scaffold130G00790 [Cucumis melo var. makuwa] >TYK2... [more]
KGN54740.15.0e-1252.13hypothetical protein Csa_012420 [Cucumis sativus][more]
BLAST of MELO3C003272 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C003272 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V9C81.9e-44100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYI62.4e-1252.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G439070 PE=4 SV=1[more]
BLAST of MELO3C003272 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..39

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003272.1MELO3C003272.1mRNA