Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTAGAGTTAAAGTGAATGTTGGTGAATCTATCTTCAATCACTTGCTACGTCACGTTAATACGTTTGCGATTCACATTCCTATTTTCTTTCCAAGAATCCTGAGTGGATTTATTTTAGCTCAACAACAAACTATACTGACCCTAGTTGATATTGTGGGTCCGGCTCCACGAGTTATTCCACTAAGTATGCGACTGTTTCAAGGCTCCCACATACCTGATGTTACTGCTGCCTTTGCCAATGCACCTGAAGGAACCAGTGCTGCTGCCGCTACAAATTCAACTGTTGGTCAACCTCTGCTACTATCTATTCCACTTGCCAATTGTCTCCTGCATGCTTTAATGGTCGAATCCTGCTCGCTTACTCGCCAAATCAGTGAACTATCTGATCGGCGTACTGTGTTGGATGCTATTCTATGA
mRNA sequence
ATGGGAATTAGAGTTAAAGTGAATGTTGGTGAATCTATCTTCAATCACTTGCTACGTCACGTTAATACGTTTGCGATTCACATTCCTATTTTCTTTCCAAGAATCCTGAGTGGATTTATTTTAGCTCAACAACAAACTATACTGACCCTAGTTGATATTGTGGGTCCGGCTCCACGAGTTATTCCACTAAGTATGCGACTGTTTCAAGGCTCCCACATACCTGATGTTACTGCTGCCTTTGCCAATGCACCTGAAGGAACCAGTGCTGCTGCCGCTACAAATTCAACTGTTGGTCAACCTCTGCTACTATCTATTCCACTTGCCAATTGTCTCCTGCATGCTTTAATGGTCGAATCCTGCTCGCTTACTCGCCAAATCAGTGAACTATCTGATCGGCGTACTGTGTTGGATGCTATTCTATGA
Coding sequence (CDS)
ATGGGAATTAGAGTTAAAGTGAATGTTGGTGAATCTATCTTCAATCACTTGCTACGTCACGTTAATACGTTTGCGATTCACATTCCTATTTTCTTTCCAAGAATCCTGAGTGGATTTATTTTAGCTCAACAACAAACTATACTGACCCTAGTTGATATTGTGGGTCCGGCTCCACGAGTTATTCCACTAAGTATGCGACTGTTTCAAGGCTCCCACATACCTGATGTTACTGCTGCCTTTGCCAATGCACCTGAAGGAACCAGTGCTGCTGCCGCTACAAATTCAACTGTTGGTCAACCTCTGCTACTATCTATTCCACTTGCCAATTGTCTCCTGCATGCTTTAATGGTCGAATCCTGCTCGCTTACTCGCCAAATCAGTGAACTATCTGATCGGCGTACTGTGTTGGATGCTATTCTATGA
Protein sequence
MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRVIPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESCSLTRQISELSDRRTVLDAIL
Homology
BLAST of MELO3C003268 vs. NCBI nr
Match:
KAA0062468.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV
Sbjct: 859 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 918
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC
Sbjct: 919 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 978
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQISELSDRRTVLDAIL
Sbjct: 979 SLTRQISELSDRRTVLDAIL 998
BLAST of MELO3C003268 vs. NCBI nr
Match:
TYK27414.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV
Sbjct: 852 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 911
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC
Sbjct: 912 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 971
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQISELSDRRTVLDAIL
Sbjct: 972 SLTRQISELSDRRTVLDAIL 991
BLAST of MELO3C003268 vs. NCBI nr
Match:
KAA0065488.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa] >TYK08728.1 putative gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 104/140 (74.29%), Postives = 118/140 (84.29%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
+G RVKVNVG+ IFNHLLRHV+TFAIHIPI FPR+LSGFIL+QQ TILT +D VG PR+
Sbjct: 605 VGTRVKVNVGKFIFNHLLRHVDTFAIHIPICFPRLLSGFILSQQPTILTPLDTVGTTPRI 664
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IP+SMRLFQG HIPDV A F +AP GT AA AT T+GQPL+LS+PLAN LL ALM ES
Sbjct: 665 IPVSMRLFQGFHIPDVAAKFESAPGGTRAAIATYPTIGQPLVLSVPLANWLLQALMAESR 724
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQISELSDR+TVLD +L
Sbjct: 725 SLTRQISELSDRQTVLDVVL 744
BLAST of MELO3C003268 vs. NCBI nr
Match:
TYK29845.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44
Identity = 103/140 (73.57%), Postives = 116/140 (82.86%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
+G VKVNVGE IFNHLLRHV+TF+IHI I F RILSGF+LAQQ TILTL+D +G APRV
Sbjct: 924 VGTGVKVNVGEFIFNHLLRHVDTFSIHILICFARILSGFLLAQQSTILTLLDTIGTAPRV 983
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIP+V A F NAPEGTS AAT+ VG PL+ + LAN LL AL+ ES
Sbjct: 984 IPLSMRLFQGSHIPNVAAEFDNAPEGTSVVAATHPIVGHPLIHFVSLANRLLQALIAESR 1043
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQIS+L+DRRTVLDAIL
Sbjct: 1044 SLTRQISDLTDRRTVLDAIL 1063
BLAST of MELO3C003268 vs. NCBI nr
Match:
KAA0035772.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 188.7 bits (478), Expect = 3.3e-44
Identity = 102/140 (72.86%), Postives = 115/140 (82.14%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
+G VKVNVGE IFNHLLRHV+TF+IHI I F RILSGF+LAQQ TILTL+D +G APRV
Sbjct: 1250 VGTGVKVNVGEFIFNHLLRHVDTFSIHILICFARILSGFLLAQQSTILTLLDTIGTAPRV 1309
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIP+V F NAPEGTS AAT+ VG PL+ + LAN LL AL+ ES
Sbjct: 1310 IPLSMRLFQGSHIPNVAVEFDNAPEGTSVVAATHPIVGHPLIHFVSLANRLLQALIAESR 1369
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQIS+L+DRRTVLDAIL
Sbjct: 1370 SLTRQISDLTDRRTVLDAIL 1389
BLAST of MELO3C003268 vs. ExPASy TrEMBL
Match:
A0A5D3DV74 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001030 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 3.6e-68
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV
Sbjct: 852 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 911
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC
Sbjct: 912 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 971
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQISELSDRRTVLDAIL
Sbjct: 972 SLTRQISELSDRRTVLDAIL 991
BLAST of MELO3C003268 vs. ExPASy TrEMBL
Match:
A0A5A7V4G0 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00570 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 3.6e-68
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV
Sbjct: 859 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 918
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC
Sbjct: 919 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 978
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQISELSDRRTVLDAIL
Sbjct: 979 SLTRQISELSDRRTVLDAIL 998
BLAST of MELO3C003268 vs. ExPASy TrEMBL
Match:
A0A5A7VCX5 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00340 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 104/140 (74.29%), Postives = 118/140 (84.29%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
+G RVKVNVG+ IFNHLLRHV+TFAIHIPI FPR+LSGFIL+QQ TILT +D VG PR+
Sbjct: 605 VGTRVKVNVGKFIFNHLLRHVDTFAIHIPICFPRLLSGFILSQQPTILTPLDTVGTTPRI 664
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IP+SMRLFQG HIPDV A F +AP GT AA AT T+GQPL+LS+PLAN LL ALM ES
Sbjct: 665 IPVSMRLFQGFHIPDVAAKFESAPGGTRAAIATYPTIGQPLVLSVPLANWLLQALMAESR 724
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQISELSDR+TVLD +L
Sbjct: 725 SLTRQISELSDRQTVLDVVL 744
BLAST of MELO3C003268 vs. ExPASy TrEMBL
Match:
A0A5D3E3G2 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00830 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 5.6e-45
Identity = 103/140 (73.57%), Postives = 116/140 (82.86%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
+G VKVNVGE IFNHLLRHV+TF+IHI I F RILSGF+LAQQ TILTL+D +G APRV
Sbjct: 924 VGTGVKVNVGEFIFNHLLRHVDTFSIHILICFARILSGFLLAQQSTILTLLDTIGTAPRV 983
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIP+V A F NAPEGTS AAT+ VG PL+ + LAN LL AL+ ES
Sbjct: 984 IPLSMRLFQGSHIPNVAAEFDNAPEGTSVVAATHPIVGHPLIHFVSLANRLLQALIAESR 1043
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQIS+L+DRRTVLDAIL
Sbjct: 1044 SLTRQISDLTDRRTVLDAIL 1063
BLAST of MELO3C003268 vs. ExPASy TrEMBL
Match:
A0A5A7SWY8 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00540 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 1.6e-44
Identity = 102/140 (72.86%), Postives = 115/140 (82.14%), Query Frame = 0
Query: 1 MGIRVKVNVGESIFNHLLRHVNTFAIHIPIFFPRILSGFILAQQQTILTLVDIVGPAPRV 60
+G VKVNVGE IFNHLLRHV+TF+IHI I F RILSGF+LAQQ TILTL+D +G APRV
Sbjct: 1250 VGTGVKVNVGEFIFNHLLRHVDTFSIHILICFARILSGFLLAQQSTILTLLDTIGTAPRV 1309
Query: 61 IPLSMRLFQGSHIPDVTAAFANAPEGTSAAAATNSTVGQPLLLSIPLANCLLHALMVESC 120
IPLSMRLFQGSHIP+V F NAPEGTS AAT+ VG PL+ + LAN LL AL+ ES
Sbjct: 1310 IPLSMRLFQGSHIPNVAVEFDNAPEGTSVVAATHPIVGHPLIHFVSLANRLLQALIAESR 1369
Query: 121 SLTRQISELSDRRTVLDAIL 141
SLTRQIS+L+DRRTVLDAIL
Sbjct: 1370 SLTRQISDLTDRRTVLDAIL 1389
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062468.1 | 7.4e-68 | 100.00 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| TYK27414.1 | 7.4e-68 | 100.00 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| KAA0065488.1 | 4.2e-47 | 74.29 | putative gag-pol polyprotein [Cucumis melo var. makuwa] >TYK08728.1 putative gag... | [more] |
| TYK29845.1 | 1.1e-44 | 73.57 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| KAA0035772.1 | 3.3e-44 | 72.86 | flocculation protein FLO11-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DV74 | 3.6e-68 | 100.00 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7V4G0 | 3.6e-68 | 100.00 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| A0A5A7VCX5 | 2.0e-47 | 74.29 | Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
| A0A5D3E3G2 | 5.6e-45 | 73.57 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7SWY8 | 1.6e-44 | 72.86 | Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
