Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGTATCAGAGATAACTGAGGAGGAAGAAGATGTACCTAGGTTTATTGACCCTGAAGTCCAAAAGGAAAGAATCCGACAAATACTCGAGTATCAGAAATCTGTGTATTCTTCTTCTTCTATGTCTTCCTCTTCTAAATCATCTTGTAGAAGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTGAGGAGATTATTTGAGATGCAACATACTAGTCTAGCCACCTATTTCCATAAGTACAGTGGATCACCTATGATAAAGTCAATTCCATTATGGGGCAGTGATTCTGATGTTGAAATCTTTGATGCTTGGGCATCCGTCAAGATTGGACTCTCACATAATTCTGGATCTCACAGAACTCATTGCACATCAAGTGGTGGTTCCATAGACAGAAAGACAGGGCTTGGGCATAGCACAATAGGTGTTAGCAAACACAGGTTAACTAGGAAAAAGTCGTTTCGTAAGCTACCTAGATTTAGTTTTTTGTGGAGTAGCGGGCGATTTAGAATCAGGTTCAGATTGAGACGACTTAGAATTCTGATTTGTGGTAAAAAATTCTGA
mRNA sequence
ATGCCAGTATCAGAGATAACTGAGGAGGAAGAAGATGTACCTAGGTTTATTGACCCTGAAGTCCAAAAGGAAAGAATCCGACAAATACTCGAGTATCAGAAATCTGTGTATTCTTCTTCTTCTATGTCTTCCTCTTCTAAATCATCTTGTAGAAGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTGAGGAGATTATTTGAGATGCAACATACTAGTCTAGCCACCTATTTCCATAAGTACAGTGGATCACCTATGATAAAGTCAATTCCATTATGGGGCAGTGATTCTGATGTTGAAATCTTTGATGCTTGGGCATCCGTCAAGATTGGACTCTCACATAATTCTGGATCTCACAGAACTCATTGCACATCAAGTGGTGGTTCCATAGACAGAAAGACAGGGCTTGGGCATAGCACAATAGGTGTTAGCAAACACAGGTTAACTAGGAAAAAGTCGTTTCGTAAGCTACCTAGATTTAGTTTTTTGTGGAGTAGCGGGCGATTTAGAATCAGGTTCAGATTGAGACGACTTAGAATTCTGATTTGTGGTAAAAAATTCTGA
Coding sequence (CDS)
ATGCCAGTATCAGAGATAACTGAGGAGGAAGAAGATGTACCTAGGTTTATTGACCCTGAAGTCCAAAAGGAAAGAATCCGACAAATACTCGAGTATCAGAAATCTGTGTATTCTTCTTCTTCTATGTCTTCCTCTTCTAAATCATCTTGTAGAAGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTGAGGAGATTATTTGAGATGCAACATACTAGTCTAGCCACCTATTTCCATAAGTACAGTGGATCACCTATGATAAAGTCAATTCCATTATGGGGCAGTGATTCTGATGTTGAAATCTTTGATGCTTGGGCATCCGTCAAGATTGGACTCTCACATAATTCTGGATCTCACAGAACTCATTGCACATCAAGTGGTGGTTCCATAGACAGAAAGACAGGGCTTGGGCATAGCACAATAGGTGTTAGCAAACACAGGTTAACTAGGAAAAAGTCGTTTCGTAAGCTACCTAGATTTAGTTTTTTGTGGAGTAGCGGGCGATTTAGAATCAGGTTCAGATTGAGACGACTTAGAATTCTGATTTGTGGTAAAAAATTCTGA
Protein sequence
MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRFRIRFRLRRLRILICGKKF
Homology
BLAST of MELO3C003244 vs. NCBI nr
Match:
KGN54372.1 (hypothetical protein Csa_017974 [Cucumis sativus])
HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 171/192 (89.06%), Postives = 181/192 (94.27%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVY--SSSSMSSSSKSSCRSSSLLDL 60
MPVSEI+EEEEDVPRFIDPEVQKERIRQIL+YQKSVY SSSS+SSSSKSSCR SSLLDL
Sbjct: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
Query: 61 MKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHN 120
MKAGNTSLRRLFEMQHTSLATYF KYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSH+
Sbjct: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
Query: 121 SGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRFRIRFRL 180
SGSH T+CTS+G SIDRKTGLG+STI VSK +LTRKKSFRKLPRF LWSS RFR+RFRL
Sbjct: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRKLPRFCLLWSSKRFRVRFRL 180
Query: 181 RRLRILICGKKF 191
RRLRILICGK+F
Sbjct: 181 RRLRILICGKQF 192
BLAST of MELO3C003244 vs. NCBI nr
Match:
KAA0045032.1 (hypothetical protein E6C27_scaffold30G00170 [Cucumis melo var. makuwa] >TYJ96294.1 hypothetical protein E5676_scaffold78209G00920 [Cucumis melo var. makuwa])
HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMK 60
MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMK
Sbjct: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMK 60
Query: 61 AGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSG 120
AGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSG
Sbjct: 61 AGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSG 120
Query: 121 SHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL 152
SHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL
Sbjct: 121 SHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL 151
BLAST of MELO3C003244 vs. NCBI nr
Match:
XP_022950113.1 (uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata])
HSP 1 Score: 269.2 bits (687), Expect = 2.6e-68
Identity = 147/195 (75.38%), Postives = 163/195 (83.59%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSK--------SSCRS 60
M VSE+TEEEE+V +FIDPEVQKERIRQIL+YQKSVYSSSS SSSS SS RS
Sbjct: 1 MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60
Query: 61 SSLLDLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVK 120
SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+K
Sbjct: 61 CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120
Query: 121 IGLSHNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRF 180
IGLSH+S S T+CTS+G +DR TGL +ST+ V+KH+LTRKKSFRKLP F LW SGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180
Query: 181 RIRFRLRRLRILICG 188
R+R R RRLRI+ICG
Sbjct: 181 RVRIRWRRLRIMICG 195
BLAST of MELO3C003244 vs. NCBI nr
Match:
XP_023543295.1 (serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 261.9 bits (668), Expect = 4.2e-66
Identity = 145/199 (72.86%), Postives = 161/199 (80.90%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSK------------S 60
M VSEITE+EE+V +FIDPEVQKERIRQIL+YQKSVYSSSS SSSS S
Sbjct: 1 MSVSEITEDEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSSSSSISTSAS 60
Query: 61 SCRSSSLLDLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAW 120
S RS SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVE DAW
Sbjct: 61 SSRSCSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVETCDAW 120
Query: 121 ASVKIGLSHNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWS 180
AS+KIGLSH+S S T+CTS+G +DR TG +ST+ V+KH+LTRKKSFRKLP F LW
Sbjct: 121 ASIKIGLSHDSRSRGTNCTSNGIFMDRNTGPRNSTVRVNKHKLTRKKSFRKLPGFGLLWR 180
Query: 181 SGRFRIRFRLRRLRILICG 188
SGRFR+R R RRLRI+ICG
Sbjct: 181 SGRFRVRIRWRRLRIMICG 199
BLAST of MELO3C003244 vs. NCBI nr
Match:
XP_022978287.1 (uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978288.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978289.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima])
HSP 1 Score: 261.2 bits (666), Expect = 7.2e-66
Identity = 144/191 (75.39%), Postives = 160/191 (83.77%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSS----SKSSCRSSSLL 60
M VSEITEEEE+V +FIDPEVQ+ERIRQIL+YQKSVYSSSS SSS S SS RS SLL
Sbjct: 1 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60
Query: 61 DLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLS 120
DLMKAGN SLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+KIG S
Sbjct: 61 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120
Query: 121 HNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRFRIRF 180
H+S S T+CTS+G +DR TGL +ST+ V+KH+LTRKKSFRKLP F LW SGRFR+R
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180
Query: 181 RLRRLRILICG 188
R R LRI+ICG
Sbjct: 181 RWRGLRIMICG 191
BLAST of MELO3C003244 vs. ExPASy TrEMBL
Match:
A0A0A0L1A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308620 PE=4 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 8.2e-84
Identity = 171/192 (89.06%), Postives = 181/192 (94.27%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVY--SSSSMSSSSKSSCRSSSLLDL 60
MPVSEI+EEEEDVPRFIDPEVQKERIRQIL+YQKSVY SSSS+SSSSKSSCR SSLLDL
Sbjct: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
Query: 61 MKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHN 120
MKAGNTSLRRLFEMQHTSLATYF KYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSH+
Sbjct: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
Query: 121 SGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRFRIRFRL 180
SGSH T+CTS+G SIDRKTGLG+STI VSK +LTRKKSFRKLPRF LWSS RFR+RFRL
Sbjct: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRKLPRFCLLWSSKRFRVRFRL 180
Query: 181 RRLRILICGKKF 191
RRLRILICGK+F
Sbjct: 181 RRLRILICGKQF 192
BLAST of MELO3C003244 vs. ExPASy TrEMBL
Match:
A0A5D3BBH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00920 PE=4 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 5.3e-75
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMK 60
MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMK
Sbjct: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSKSSCRSSSLLDLMK 60
Query: 61 AGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSG 120
AGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSG
Sbjct: 61 AGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHNSG 120
Query: 121 SHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL 152
SHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL
Sbjct: 121 SHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL 151
BLAST of MELO3C003244 vs. ExPASy TrEMBL
Match:
A0A6J1GDZ9 (uncharacterized protein LOC111453292 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453292 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 147/195 (75.38%), Postives = 163/195 (83.59%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSK--------SSCRS 60
M VSE+TEEEE+V +FIDPEVQKERIRQIL+YQKSVYSSSS SSSS SS RS
Sbjct: 1 MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60
Query: 61 SSLLDLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVK 120
SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+K
Sbjct: 61 CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120
Query: 121 IGLSHNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRF 180
IGLSH+S S T+CTS+G +DR TGL +ST+ V+KH+LTRKKSFRKLP F LW SGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180
Query: 181 RIRFRLRRLRILICG 188
R+R R RRLRI+ICG
Sbjct: 181 RVRIRWRRLRIMICG 195
BLAST of MELO3C003244 vs. ExPASy TrEMBL
Match:
A0A6J1ISL5 (uncharacterized protein LOC111478319 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478319 PE=4 SV=1)
HSP 1 Score: 261.2 bits (666), Expect = 3.5e-66
Identity = 144/191 (75.39%), Postives = 160/191 (83.77%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSS----SKSSCRSSSLL 60
M VSEITEEEE+V +FIDPEVQ+ERIRQIL+YQKSVYSSSS SSS S SS RS SLL
Sbjct: 1 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60
Query: 61 DLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLS 120
DLMKAGN SLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+KIG S
Sbjct: 61 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120
Query: 121 HNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRFRIRF 180
H+S S T+CTS+G +DR TGL +ST+ V+KH+LTRKKSFRKLP F LW SGRFR+R
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180
Query: 181 RLRRLRILICG 188
R R LRI+ICG
Sbjct: 181 RWRGLRIMICG 191
BLAST of MELO3C003244 vs. ExPASy TrEMBL
Match:
A0A6J1GDW9 (uncharacterized protein LOC111453292 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453292 PE=4 SV=1)
HSP 1 Score: 253.8 bits (647), Expect = 5.5e-64
Identity = 139/185 (75.14%), Postives = 154/185 (83.24%), Query Frame = 0
Query: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVYSSSSMSSSSK--------SSCRS 60
M VSE+TEEEE+V +FIDPEVQKERIRQIL+YQKSVYSSSS SSSS SS RS
Sbjct: 1 MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60
Query: 61 SSLLDLMKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVK 120
SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+K
Sbjct: 61 CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120
Query: 121 IGLSHNSGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRLTRKKSFRKLPRFSFLWSSGRF 178
IGLSH+S S T+CTS+G +DR TGL +ST+ V+KH+LTRKKSFRKLP F LW SGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN54372.1 | 1.7e-83 | 89.06 | hypothetical protein Csa_017974 [Cucumis sativus] | [more] |
KAA0045032.1 | 1.1e-74 | 100.00 | hypothetical protein E6C27_scaffold30G00170 [Cucumis melo var. makuwa] >TYJ96294... | [more] |
XP_022950113.1 | 2.6e-68 | 75.38 | uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata] | [more] |
XP_023543295.1 | 4.2e-66 | 72.86 | serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cuc... | [more] |
XP_022978287.1 | 7.2e-66 | 75.39 | uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978288... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L1A7 | 8.2e-84 | 89.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308620 PE=4 SV=1 | [more] |
A0A5D3BBH5 | 5.3e-75 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1GDZ9 | 1.3e-68 | 75.38 | uncharacterized protein LOC111453292 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1ISL5 | 3.5e-66 | 75.39 | uncharacterized protein LOC111478319 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1GDW9 | 5.5e-64 | 75.14 | uncharacterized protein LOC111453292 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |