MELO3C003237 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003237
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	zinc finger CCCH domain-containing protein 25
Location	chr08: 32080177 .. 32083172 (+)
RNA-Seq Expression	MELO3C003237
Synteny	MELO3C003237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTTGCCGTCTTCGCCCAGTAAGTCCACAATTCTATCTATTTTCTCCCCCCTCGTTATTTTTATTTTGCTCTCTTGCAGCTCTTTTTCGTATTTACTTGATAGATTGTGTAGTTGGATAAGTTTAGATTGAGATGTTGTGCTAGATTTGTGTGTTTGACATTGAAATGAATTATTTCTCCCTTGGTCGTGGTCTTGTTGTTCCAGTAGCTTCTAAATTGGACTCTGCTGGTAGTGACGAAAATTTATGGGGTTCTGTGTAAGTAGAAGAATTTGTTTGTAGGTTGTTGTAAATCGTTTTTAGTCGACAATCCTAGTTACTTAGAATTGGTAACTTAAGAGGTGGAGTTGATGTTTCAAGTTGTGCAAATAGACTAATTGAGCTCATAGTTGTTACTCCAGTAGATTTTGTTGTTTCTTGTAGTGTCAGCTTTTCCTATTTTACAATTCATCTTCATTGTGACCTCGGAGGGGCAACCATATGAGAAGGGTTGGGATGTTTGAAGATACCTCTTTAGGTCCTAGGTTTATATCTCAGGTGGAAAACTCGGCTCCGATTGGTAATATTTGGTTTATTGTTTTTAGTTTTTGAAAATTAAGCGTAGACATCCATCACAATTTCATCTCTCCCCTTTGTGTTTTTAGATGTGATTAAGAATTCAATTCTTTCACTTAAAAAGTATGCAAATCATGGTAAGAAAATGAGAGCATATAGGCTTGGTTTTTGAAAACTAAAAACTAAATGGTTACAAAACAGGGCCTAAGGTACTCAAAACCTTTGTTTTCTCGCTGGAGCTAGCCTTGGTGTGGGGAAGGCCTCTTGGCAACTAGCAGGGTAGGTTCTATGCATGATGCTAGAAGAGCTCTTTGATATCTTGGTTTATGTGTGCGTGTGTAATCACATTTATTTCAATTAATAAAAGAATCCTTTTCTTCTTCCCTGCCTTTTCACCGTTTAGTTGTCTGTAAATGCACTTTTAAGGTTACATGTTCACTTGTGGGTCATTTGCGTTTTTTGAATATTGAAATATATTTGAACGTACAGGTACGGAGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGACCAGAGAAGTACAAATCTTGCTGTAGGTTGTCTCCTTCTCCTCTCTCTAAACCGTTCATTGTTTGTTATATGGGACTGAATGCAGATCTCTAAGTAATGTTGTTTGTCGCTTTCAGATAATTTGAATGGTGCACAGATTCTAGGTCGAATTGTTAGGGTTGATCATGCGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAACAACAAAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGATGCAAATTCTCCCATGATGAGCAGGTATGTGTGAGACCTTCTGTTATGTAAATTTTCTCTAGAAAGGATAGAAAGGGGTTTTGATCCCTGACAGTTTGTTAATAATGGGAAGAAGGGATGGTTTGATGTATAGCTAAGGAAGTTTGTTGTTTTTTGTAGGGGAAATATCTTCGTGTTTAGCTTTTACCTTTGATGTTACTAGCTAGTTATGTCTGAATTGAATAAAAGAAGTTTGAAGACTATTTTTTCTTCAGCATGCTTCGATTAGAGTTTTAGCTTTACTTTAAGAAATTTGATGCATGGAGATTGTTCGTGTTTTAGAGAGCTGCAGACACAGGCTGGGGGGTGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACGGTAGAAAAAATGACAACAAAGAATTACGTGCAAAAGGAAGGAAAAATAGTGATAACTTAGGAAGACATCCAAGGGAAACTAGTGGGAGTCTGAGGCAGGAAAATAGACTGAAAGGTTGTGATGATAGTAAAGAATCAGAGCTCAAGTCAAGAGAGGATCATGGCGAGAAAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATCCTGATCCGAAGTCAGGAGATGATCATTATAAAAGGGAAGAGAAGAGATCTAGAAGGAACCACGATGATAACAGGAAAGACGAGAAAAGATCAAGAAAACATGACGATGATGATGAGATGAAATCTGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAGCATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGCGACGGAGAGTATCCGCCAAAGCTGAGGGAAGATGATAAAAGAAGGGAAAGAGATATATCAGTAAGACATCGCTCAGAATCACATAGGAGGGAAAATCCAGATGAGAAGAGAGATTATTGGTCCTCTCAGGGTGGTAGAGATTCTTCATCACATTCTCATAGAGAAAGAAATGAGGACTGTCATAGATAAAATGAACGACTACACAACATATCATCATGGTTAGTCCTCTCGTGCTAAGTTCCAACATTATAGTAGAACATAATTTGGTTTTGTGATGGCCTGTTTTGTTTCCTTGTATTGTATTGGCAACCTTTTTTTGGCCACTCACTATTTGTACTATCAAAATAGGTAGTAACTCTTTGATGCGGAAATCTCTGAGTAGAAAAGGTAAAGTACATGCTTAGGAGAATAAAATATAGGAATTAATTTTCTACAAGTTTCCTTGACGCTCAAATGTTGTAGGTCAGGTGGGTTGTCCCAATAGATTAGCTGAGATGCGTGTAAGCTAGCATTTTATGAATATTAGAAAAAAGAAGAAAAAAAGGTTTATGCTTGTGAGTGATGGTGGAGGATTGTATATTGATCATTTGAATATTCTTAATTTCTTCTTATCCAATTGGTATAACCATTCAAGTTGCAATTAAATGTTGGTGGTAATCTTTTGGTTTCA

mRNA sequence

ATGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTTGCCGTCTTCGCCCAGTACGGAGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGACCAGAGAAGTACAAATCTTGCTGTAGATAATTTGAATGGTGCACAGATTCTAGGTCGAATTGTTAGGGTTGATCATGCGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAACAACAAAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGATGCAAATTCTCCCATGATGAGCAGAGAGCTGCAGACACAGGCTGGGGGGTGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACGGTAGAAAAAATGACAACAAAGAATTACGTGCAAAAGGAAGGAAAAATAGTGATAACTTAGGAAGACATCCAAGGGAAACTAGTGGGAGTCTGAGGCAGGAAAATAGACTGAAAGGTTGTGATGATAGTAAAGAATCAGAGCTCAAGTCAAGAGAGGATCATGGCGAGAAAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATCCTGATCCGAAGTCAGGAGATGATCATTATAAAAGGGAAGAGAAGAGATCTAGAAGGAACCACGATGATAACAGGAAAGACGAGAAAAGATCAAGAAAACATGACGATGATGATGAGATGAAATCTGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAGCATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGCGACGGAGAGTATCCGCCAAAGCTGAGGGAAGATGATAAAAGAAGGGAAAGAGATATATCAGTAAGACATCGCTCAGAATCACATAGGAGGGAAAATCCAGATGAGAAGAGAGATTATTGGTCCTCTCAGGGTGGTAGAGATTCTTCATCACATTCTCATAGAGAAAGAAATGAGGACTGTCATAGATAAAATGAACGACTACACAACATATCATCATGGTTAGTCCTCTCGTGCTAAGTTCCAACATTATAGTAGAACATAATTTGGTTTTGTGATGGCCTGTTTTGTTTCCTTGTATTGTATTGGCAACCTTTTTTTGGCCACTCACTATTTGTACTATCAAAATAGGTAGTAACTCTTTGATGCGGAAATCTCTGAGTAGAAAAGGTAAAGTACATGCTTAGGAGAATAAAATATAGGAATTAATTTTCTACAAGTTTCCTTGACGCTCAAATGTTGTAGGTCAGGTGGGTTGTCCCAATAGATTAGCTGAGATGCGTGTAAGCTAGCATTTTATGAATATTAGAAAAAAGAAGAAAAAAAGGTTTATGCTTGTGAGTGATGGTGGAGGATTGTATATTGATCATTTGAATATTCTTAATTTCTTCTTATCCAATTGGTATAACCATTCAAGTTGCAATTAAATGTTGGTGGTAATCTTTTGGTTTCA

Coding sequence (CDS)

GCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTTGCCGTCTTCGCCCAGTACGGAGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTATGCCTTTGTTGCATATGAAGACCAGAGAAGTACAAATCTTGCTGTAGATAATTTGAATGGTGCACAGATTCTAGGTCGAATTGTTAGGGTTGATCATGCGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAACAACAAAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGCGGAGCTGGATGCAAATTCTCCCATGATGAGCAGAGAGCTGCAGACACAGGCTGGGGGGTGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACGGTAGAAAAAATGACAACAAAGAATTACGTGCAAAAGGAAGGAAAAATAGTGATAACTTAGGAAGACATCCAAGGGAAACTAGTGGGAGTCTGAGGCAGGAAAATAGACTGAAAGGTTGTGATGATAGTAAAGAATCAGAGCTCAAGTCAAGAGAGGATCATGGCGAGAAAGATGAGAAGAGATCGAGAAGATATGATCTTGATGGCAATCCTGATCCGAAGTCAGGAGATGATCATTATAAAAGGGAAGAGAAGAGATCTAGAAGGAACCACGATGATAACAGGAAAGACGAGAAAAGATCAAGAAAACATGACGATGATGATGAGATGAAATCTGAAGATGATCGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAGCATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCATGGCGACGGAGAGTATCCGCCAAAGCTGAGGGAAGATGATAAAAGAAGGGAAAGAGATATATCAGTAAGACATCGCTCAGAATCACATAGGAGGGAAAATCCAGATGAGAAGAGAGATTATTGGTCCTCTCAGGGTGGTAGAGATTCTTCATCACATTCTCATAGAGAAAGAAATGAGGACTGTCATAGATAA

Protein sequence

AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR

Homology

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BLAST of MELO3C003237 vs. NCBI nr
Match: XP_008449221.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo] >KAA0045039.1 zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 696.4 bits (1796), Expect = 1.3e-196
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR
Sbjct: 210 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER
Sbjct: 330 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 389

Query: 361 NEDCHR 367
           NEDCHR
Sbjct: 390 NEDCHR 395

[Close]

BLAST of MELO3C003237 vs. NCBI nr
Match: XP_008449231.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 684.9 bits (1766), Expect = 3.9e-193
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR
Sbjct: 210 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER
Sbjct: 330 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 389

Query: 361 N 362
           N
Sbjct: 390 N 390

[Close]

BLAST of MELO3C003237 vs. NCBI nr
Match: TYJ96288.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 665.6 bits (1716), Expect = 2.4e-187
Identity = 366/435 (84.14%), Postives = 366/435 (84.14%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQ------------------------------- 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQ                               
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQGNHMRRVGMFEDTSLGPRFISQVENSAPIDV 89

Query: 61  --------------------------------------YGEIVDVNLIRDKGTGKSKGYA 120
                                                 YGEIVDVNLIRDKGTGKSKGYA
Sbjct: 90  IKNSILSLKKYANHGTQNLCFLAGASLGVGKASWQLAGYGEIVDVNLIRDKGTGKSKGYA 149

Query: 121 FVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQ 180
           FVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQ
Sbjct: 150 FVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQ 209

Query: 181 RGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNL 240
           RGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNL
Sbjct: 210 RGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNL 269

Query: 241 GRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHY 300
           GRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHY
Sbjct: 270 GRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHY 329

Query: 301 KREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDY 360
           KREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDY
Sbjct: 330 KREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDY 389

Query: 361 NTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRD 367
           NTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRD
Sbjct: 390 NTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRD 449

[Close]

BLAST of MELO3C003237 vs. NCBI nr
Match: XP_004147921.1 (zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypothetical protein Csa_018037 [Cucumis sativus])

HSP 1 Score: 631.7 bits (1628), Expect = 3.9e-177
Identity = 340/366 (92.90%), Postives = 346/366 (94.54%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDH SKYKKKEEEDEEE+QKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWG AEDASSKWGHDKFD RKN +KEL AKGRK SDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGAAEDASSKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENR +G DDSKESELKSREDHG KDEKRSRRYDLDGN DPKSGDD YK EEKRS R
Sbjct: 210 SLRQENRPRGWDDSKESELKSREDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSSR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHD+DDEMK EDDRYRKEENRYRRNQDNELPQHSRRDY TREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDNDDEMKLEDDRYRKEENRYRRNQDNELPQHSRRDYKTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGD EYPPKLREDDKRRERD+SVRHRSES+RRENPDEKRDY SS GGRDSSSHSHRER
Sbjct: 330 KRHGDKEYPPKLREDDKRRERDVSVRHRSESYRRENPDEKRDYRSSHGGRDSSSHSHRER 389

Query: 361 NEDCHR 367
           NED  R
Sbjct: 390 NEDRRR 395

[Close]

BLAST of MELO3C003237 vs. NCBI nr
Match: TYK15418.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 610.9 bits (1574), Expect = 7.1e-171
Identity = 332/368 (90.22%), Postives = 343/368 (93.21%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRI+RVDH SKYKKKEEEDEEE+QKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIIRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAA+TGWG AEDASSKWGHDKFD R N +KELRAKGRKNSD+LGRHPRETSG
Sbjct: 150 CKFSHDEQRAANTGWGAAEDASSKWGHDKFDSRTNHDKELRAKGRKNSDDLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENR KG DDSK SELK REDH  +DEKRSRRYDLDGNPDPK GDD YKREEKRS R
Sbjct: 210 SLRQENRPKGWDDSKGSELKPREDHWRRDEKRSRRYDLDGNPDPKLGDDRYKREEKRSTR 269

Query: 241 NH--DDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDR 300
           NH  DDNRKDEKRSRKHD+D+EMK EDDRYRKEENRYRRNQDNELPQHSRR+YNTREEDR
Sbjct: 270 NHEYDDNRKDEKRSRKHDNDEEMKLEDDRYRKEENRYRRNQDNELPQHSRRNYNTREEDR 329

Query: 301 SSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHR 360
           SSKRHGD EY PKL EDDKRRERDISVRHRSESHRRENP+EKRD+ SS GGRDSSSHSH 
Sbjct: 330 SSKRHGDEEYQPKLGEDDKRRERDISVRHRSESHRRENPNEKRDFRSSHGGRDSSSHSHT 389

Query: 361 ERNEDCHR 367
           ERNED  R
Sbjct: 390 ERNEDRRR 397

[Close]

BLAST of MELO3C003237 vs. ExPASy Swiss-Prot
Match: Q10B98 (Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0826400 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.1e-64
Identity = 156/290 (53.79%), Postives = 199/290 (68.62%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AK+KDSAYVFVGGIPYDLTEGDLLAVFAQYGE+VDVNL+RDKGTGKSKG+AF+AYEDQRS
Sbjct: 30  AKFKDSAYVFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           T LAVDNLNGA++LGRIVRVDH SKYKKKEEEDEEE QKKREARGVC AFQ+GEC RGA 
Sbjct: 90  TILAVDNLNGAKVLGRIVRVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGAS 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKEL-RAKGRKNSDNLGRHPRETS 180
           C++SHDEQR A+TGWG  E++ ++W HD+       +K+   + G +   +  +   +++
Sbjct: 150 CRYSHDEQRNANTGWGSKEESKARWEHDRHHEPPMSHKKFPSSAGEQRFPDRAKEENKST 209

Query: 181 GSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSR 240
           G   Q +R +   D ++S L+   D G KD  R R    D +P+   GD   +R   R  
Sbjct: 210 GREGQSSRSEAYKD-RDSRLR-HSDRGSKDHDRYRH---DRSPERSRGD--RQRNNDRYA 269

Query: 241 RNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRR 290
           +  D+  +  +   KHD+ D+ +S  D         R N+D+E  + SRR
Sbjct: 270 QGRDEKSERYRSEVKHDEGDQKRSRRDTDSSGHYERRGNEDSERYRKSRR 312

[Close]

BLAST of MELO3C003237 vs. ExPASy Swiss-Prot
Match: Q9SD61 (Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=At3g47120 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-58
Identity = 169/327 (51.68%), Postives = 209/327 (63.91%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYK+SAYV+VGGIP+DLTEGDLLAVF+QYGEIVDVNLIRDKGTGKSKG+AF+AYEDQRS
Sbjct: 30  AKYKNSAYVYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           T LAVDNLNGA +LGR ++VDH   YKK EEEDEE +++ REARGVCRAFQRGECTRG  
Sbjct: 90  TILAVDNLNGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDS 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDK-FDGRKNDNKELRAKGRKNSDNLGRHPRE-- 180
           CKFSHDE+RAA+TGWG  ED SSKW HDK  +GR       R +  +       H  +  
Sbjct: 150 CKFSHDEKRAANTGWGHEEDRSSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRA 209

Query: 181 -TSGSLRQENRLKGCDDSKESELK-------SREDHGEKDEKRSRRYDLDGNPDPKSGDD 240
            T+G   +E+R    D  K +  K       +R D     E++S R    G  D   GD 
Sbjct: 210 ATTGWGHEEDRSSKWDQDKLNGAKKGGTSFGNRGDFKPDVEEKSYR----GRGD---GDA 269

Query: 241 HYKREEKRSRRNHDD---------NRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQD 300
            Y R ++R R + +D         + K++KRS ++D+    +  D+     E++  R QD
Sbjct: 270 SYGRPKERERVDREDMGPRSRDAYDMKEQKRSGRYDNAYSRRHNDEIDYVREDKGSRAQD 329

Query: 301 NELPQ-HSRRDYNTREE-DRSSKRHGD 306
            E  +  SRRD N REE DR S R  D
Sbjct: 330 WEKRKAESRRDRNDREEKDRDSLRRED 349

[Close]

BLAST of MELO3C003237 vs. ExPASy Swiss-Prot
Match: Q8R0F5 (RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.8e-23
Identity = 109/335 (32.54%), Postives = 162/335 (48.36%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           ++YK SA++FVGG+PY+LTEGD++ VF+QYGEIV++NL+RDK TGKSKG+ F+ YEDQRS
Sbjct: 30  SEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           T LAVDN NG +I GR +RVDH S Y+  +E ++ +         V R  Q     +G G
Sbjct: 90  TVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDD--------VTRELQE----KGCG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
            K              V+ED  +K         K D KE +           R   +T G
Sbjct: 150 VKTPPSSPPE------VSEDEDAKLTKK----HKKDKKEKKK----------RKKEKTEG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
             + E     C  S+ + +K +     KDE+ SR++        K+ +   K E + S++
Sbjct: 210 QAQAEQ--PSC--SRSATVKEK-----KDERASRKH------SSKTSERAQKSEHRESKK 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           +H  +           +D E K+  ++ + E     R +  E  +   R  ++       
Sbjct: 270 SHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGRH 314

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRE 336
           + H DG      R   + R  D S RH+   H RE
Sbjct: 330 RGHSDGR---SHRSRSRSRSPDKSHRHKKYRHSRE 314

[Close]

BLAST of MELO3C003237 vs. ExPASy Swiss-Prot
Match: B0BN49 (RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-22
Identity = 115/348 (33.05%), Postives = 170/348 (48.85%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           ++YKDSA++F+GG+PY+LTEGD++ VF+QYGEIV++NL+RDK TGKSKG+ F+ YEDQRS
Sbjct: 30  SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           T LAVDN NG +I GR +RVDH + Y+  +E ++ +         V R  Q     +G G
Sbjct: 90  TVLAVDNFNGIKIKGRTIRVDHVANYRAPQESEDVDD--------VTRELQE----KGCG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
            K              V+ED  +K         K D KE + K  K      +  R    
Sbjct: 150 AKTPPSSPPE------VSEDEDAKVTKKP----KKDKKEKKKKKEKE-----KTERPVQA 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
            L   +R K     KE++ +S + H  K  +R+++ +               RE K+S  
Sbjct: 210 ELPSCSRSK---TVKETDEQSAKKHSSKPSERAQKSEC--------------RERKKSHS 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
              D R    R R  + + E K E  ++  + +  R  ++    +   R   T     SS
Sbjct: 270 GSPDGR-TSCRGRAEEPEWEAKKEKHKHEHKPSSRREGEEKSRDKDRGRSSGT----HSS 328

Query: 301 KRHGDGE-YPPKLREDDKRRERDISVRHRSE--SHRRE--NPDEKRDY 344
           + HG  E    + R   + R  D S RH+    SH RE  +  ++R Y
Sbjct: 330 RHHGHSEGRSHRSRSRSRSRSPDRSHRHKKHRYSHERESFHASDRRHY 328

[Close]

BLAST of MELO3C003237 vs. ExPASy Swiss-Prot
Match: Q9Y388 (RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 5.7e-22
Identity = 115/344 (33.43%), Postives = 169/344 (49.13%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           ++YKDSA++F+GG+PY+LTEGD++ VF+QYGEIV++NL+RDK TGKSKG+ F+ YEDQRS
Sbjct: 30  SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           T LAVDN NG +I GR +RVDH S Y+  ++ +E +         V R  Q   C  GA 
Sbjct: 90  TILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDD--------VTRQLQEKGC--GAR 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
                  + + D      E  + K   DK + +K      + K ++ +D   +  + +S 
Sbjct: 150 TPSPSLSESSED------EKPTKKHKKDKKEKKK------KKKEKEKADREVQAEQPSSS 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           S R++         KE +    + H  K+ +R+++       +P+ G    K     S  
Sbjct: 210 SPRRKT-------VKEKDDTGPKKHSSKNSERAQK------SEPREGQKLPKSRTAYSGG 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
             D  R+ +K   KH    E KS   R  +EE    R++      HS   YN R E RS 
Sbjct: 270 AEDLERELKKEKPKH----EHKSSSRREAREEKTRIRDRGRSSDAHSSW-YNGRSEGRSY 319

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRH----RSESHRRENPDEK 341
           +               + R RD S RH    RS      NP ++
Sbjct: 330 R--------------SRSRSRDKSHRHKRARRSRERESSNPSDR 319

[Close]

BLAST of MELO3C003237 vs. ExPASy TrEMBL
Match: A0A5A7TUW9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00260 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.2e-197
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR
Sbjct: 210 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER
Sbjct: 330 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 389

Query: 361 NEDCHR 367
           NEDCHR
Sbjct: 390 NEDCHR 395

[Close]

BLAST of MELO3C003237 vs. ExPASy TrEMBL
Match: A0A1S3BLJ3 (zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.2e-197
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR
Sbjct: 210 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER
Sbjct: 330 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 389

Query: 361 NEDCHR 367
           NEDCHR
Sbjct: 390 NEDCHR 395

[Close]

BLAST of MELO3C003237 vs. ExPASy TrEMBL
Match: A0A1S3BLK5 (zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR
Sbjct: 210 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER
Sbjct: 330 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 389

Query: 361 N 362
           N
Sbjct: 390 N 390

[Close]

BLAST of MELO3C003237 vs. ExPASy TrEMBL
Match: A0A5D3BDJ8 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00830 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.2e-187
Identity = 366/435 (84.14%), Postives = 366/435 (84.14%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQ------------------------------- 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQ                               
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQGNHMRRVGMFEDTSLGPRFISQVENSAPIDV 89

Query: 61  --------------------------------------YGEIVDVNLIRDKGTGKSKGYA 120
                                                 YGEIVDVNLIRDKGTGKSKGYA
Sbjct: 90  IKNSILSLKKYANHGTQNLCFLAGASLGVGKASWQLAGYGEIVDVNLIRDKGTGKSKGYA 149

Query: 121 FVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQ 180
           FVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQ
Sbjct: 150 FVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQ 209

Query: 181 RGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNL 240
           RGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNL
Sbjct: 210 RGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNL 269

Query: 241 GRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHY 300
           GRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHY
Sbjct: 270 GRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHY 329

Query: 301 KREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDY 360
           KREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDY
Sbjct: 330 KREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDY 389

Query: 361 NTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRD 367
           NTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRD
Sbjct: 390 NTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRD 449

[Close]

BLAST of MELO3C003237 vs. ExPASy TrEMBL
Match: A0A0A0KZW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.9e-177
Identity = 340/366 (92.90%), Postives = 346/366 (94.54%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS
Sbjct: 30  AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           TNLAVDNLNGAQILGRIVRVDH SKYKKKEEEDEEE+QKKREARGVCRAFQRGECTRGAG
Sbjct: 90  TNLAVDNLNGAQILGRIVRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAG 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSG 180
           CKFSHDEQRAADTGWG AEDASSKWGHDKFD RKN +KEL AKGRK SDNLGRHPRETSG
Sbjct: 150 CKFSHDEQRAADTGWGAAEDASSKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSG 209

Query: 181 SLRQENRLKGCDDSKESELKSREDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRSRR 240
           SLRQENR +G DDSKESELKSREDHG KDEKRSRRYDLDGN DPKSGDD YK EEKRS R
Sbjct: 210 SLRQENRPRGWDDSKESELKSREDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSSR 269

Query: 241 NHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREEDRSS 300
           NHDDNRKDEKRSRKHD+DDEMK EDDRYRKEENRYRRNQDNELPQHSRRDY TREEDRSS
Sbjct: 270 NHDDNRKDEKRSRKHDNDDEMKLEDDRYRKEENRYRRNQDNELPQHSRRDYKTREEDRSS 329

Query: 301 KRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHSHRER 360
           KRHGD EYPPKLREDDKRRERD+SVRHRSES+RRENPDEKRDY SS GGRDSSSHSHRER
Sbjct: 330 KRHGDKEYPPKLREDDKRRERDVSVRHRSESYRRENPDEKRDYRSSHGGRDSSSHSHRER 389

Query: 361 NEDCHR 367
           NED  R
Sbjct: 390 NEDRRR 395

[Close]

BLAST of MELO3C003237 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-59
Identity = 169/327 (51.68%), Postives = 209/327 (63.91%), Query Frame = 0


Query: 1   AKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRS 60
           AKYK+SAYV+VGGIP+DLTEGDLLAVF+QYGEIVDVNLIRDKGTGKSKG+AF+AYEDQRS
Sbjct: 30  AKYKNSAYVYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRS 89

Query: 61  TNLAVDNLNGAQILGRIVRVDHASKYKKKEEEDEEEQQKKREARGVCRAFQRGECTRGAG 120
           T LAVDNLNGA +LGR ++VDH   YKK EEEDEE +++ REARGVCRAFQRGECTRG  
Sbjct: 90  TILAVDNLNGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDS 149

Query: 121 CKFSHDEQRAADTGWGVAEDASSKWGHDK-FDGRKNDNKELRAKGRKNSDNLGRHPRE-- 180
           CKFSHDE+RAA+TGWG  ED SSKW HDK  +GR       R +  +       H  +  
Sbjct: 150 CKFSHDEKRAANTGWGHEEDRSSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRA 209

Query: 181 -TSGSLRQENRLKGCDDSKESELK-------SREDHGEKDEKRSRRYDLDGNPDPKSGDD 240
            T+G   +E+R    D  K +  K       +R D     E++S R    G  D   GD 
Sbjct: 210 ATTGWGHEEDRSSKWDQDKLNGAKKGGTSFGNRGDFKPDVEEKSYR----GRGD---GDA 269

Query: 241 HYKREEKRSRRNHDD---------NRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQD 300
            Y R ++R R + +D         + K++KRS ++D+    +  D+     E++  R QD
Sbjct: 270 SYGRPKERERVDREDMGPRSRDAYDMKEQKRSGRYDNAYSRRHNDEIDYVREDKGSRAQD 329

Query: 301 NELPQ-HSRRDYNTREE-DRSSKRHGD 306
            E  +  SRRD N REE DR S R  D
Sbjct: 330 WEKRKAESRRDRNDREEKDRDSLRRED 349

[Close]

BLAST of MELO3C003237 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 72.4 bits (176), Expect = 8.5e-13
Identity = 29/79 (36.71%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 6   SAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAV 65
           S+ +F+GG+ Y + E  L   F +YGE+VD  +I D+ TG+S+G+ FV +    + + A+
Sbjct: 39  SSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAI 98

Query: 66  DNLNGAQILGRIVRVDHAS 85
             L+G  + GR+V+V++A+
Sbjct: 99  QALDGRDLHGRVVKVNYAN 117

[Close]

BLAST of MELO3C003237 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 9  VFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNL 68
          VFVG IPYD TE  L  +  + G +V   L+ D+ TGK KGY F  Y+D+ +   A  NL
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70

Query: 69 NGAQILGRIVRVDHASKYKKKEEEDEEEQ 98
             +I GR +RVD A   K  ++  ++ Q
Sbjct: 71 QSYEINGRQLRVDFAENDKGTDKTRDQSQ 99

The following BLAST results are available for this feature:

BLAST of MELO3C003237 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449221.1	1.3e-196	100.00	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumi...	[more]
XP_008449231.1	3.9e-193	100.00	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumi...	[more]
TYJ96288.1	2.4e-187	84.14	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]
XP_004147921.1	3.9e-177	92.90	zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypo...	[more]
TYK15418.1	7.1e-171	90.22	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]

BLAST of MELO3C003237 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10B98	2.1e-64	53.79	Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SD61	1.7e-58	51.68	Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8R0F5	6.8e-23	32.54	RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=...	[more]
B0BN49	2.6e-22	33.05	RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=...	[more]
Q9Y388	5.7e-22	33.43	RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2	[more]

BLAST of MELO3C003237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUW9	6.2e-197	100.00	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S3BLJ3	6.2e-197	100.00	zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX...	[more]
A0A1S3BLK5	1.9e-193	100.00	zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX...	[more]
A0A5D3BDJ8	1.2e-187	84.14	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A0A0KZW7	1.9e-177	92.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1	[more]

BLAST of MELO3C003237 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47120.1	1.2e-59	51.68	RNA recognition motif (RRM)-containing protein	[more]
AT5G61030.1	8.5e-13	36.71	glycine-rich RNA-binding protein 3	[more]
AT1G71800.1	1.6e-11	40.45	cleavage stimulating factor 64	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 103..127 e-value: 0.001 score: 28.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 106..126 e-value: 7.1E-5 score: 22.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 101..128 score: 14.802481
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 3.3E-26 score: 103.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..77 e-value: 3.0E-21 score: 75.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 20.303486
None	No IPR available	GENE3D	3.30.1370.210		coord: 104..204 e-value: 7.3E-6 score: 28.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..366
None	No IPR available	PANTHER	PTHR45880:SF1	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..281
None	No IPR available	PANTHER	PTHR45880	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..281
None	No IPR available	CDD	cd12411	RRM_ist3_like	coord: 1..84 e-value: 3.38639E-52 score: 166.275
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..103 e-value: 2.1E-31 score: 110.5
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 104..126
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003237.1	MELO3C003237.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding