MELO3C003231 (gene) Melon (DHL92) v4

Overview
NameMELO3C003231
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionjosephin-like protein
Locationchr08: 32010030 .. 32010751 (+)
RNA-Seq ExpressionMELO3C003231
SyntenyMELO3C003231
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAAAGGCCAACACCATCCATAGATTTATATATATATATGTGTGTGTGTGTGTTGTGTGTGTATTTCTAAAATAAATAAATGAATGAGATCTTGGTCAGAGACAGCTAGCTAACTTAAAGGCACCTTTGAAAATGAAAAAATAAAAATAAAAAACAAACATTATGTCTTTTTTTTTTTTCACTCACTTCTAAATTGCTTTTTTTTCTTTTCTTCCTTCCCTCTCTCTCTCTTCAAATATCATAACAAATTCCCCAAAAAGAAAAGAAATGTCAACAAAATTAAGCTCAGGCAGAAGAGTGAGTTTCAGCTCAGATCAGTCGGCGGCGGGGAAGTCAAGAAATAGGAAAAGGCCGATCATCGTCTTTTGGGTTTTTCGGCTGCCGAAATCCGGCAGATTCTCGCCGGAAAAGTTCCTCCGGCGGCTGGGAGCTAAAATGGCTAAAGTTCTACGGTATGTTTCGTTGAGAAAGAGATCGACTTCTTCTAATAACTCTTCGTCTTTGAAAAATAATGGTTCTTCCAAGTTCAACAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACCGAGCTGAAGCTGTCAAAGATTGTATTAAGTTCTTCAATTCTTCTAATTCTTCTTCAGCTGTTTGAATTTCTTTCTTCTTCTTTTTTATGCAGTGTAATTGTGTTAATGTAATCTCATGGTTCTTATAAATACTACGTTGAGTTCTTTCT

mRNA sequence

ACCAAAAGGCCAACACCATCCATAGATTTATATATATATATGTGTGTGTGTGTGTTGTGTGTGTATTTCTAAAATAAATAAATGAATGAGATCTTGGTCAGAGACAGCTAGCTAACTTAAAGGCACCTTTGAAAATGAAAAAATAAAAATAAAAAACAAACATTATGTCTTTTTTTTTTTTCACTCACTTCTAAATTGCTTTTTTTTCTTTTCTTCCTTCCCTCTCTCTCTCTTCAAATATCATAACAAATTCCCCAAAAAGAAAAGAAATGTCAACAAAATTAAGCTCAGGCAGAAGAGTGAGTTTCAGCTCAGATCAGTCGGCGGCGGGGAAGTCAAGAAATAGGAAAAGGCCGATCATCGTCTTTTGGGTTTTTCGGCTGCCGAAATCCGGCAGATTCTCGCCGGAAAAGTTCCTCCGGCGGCTGGGAGCTAAAATGGCTAAAGTTCTACGGTATGTTTCGTTGAGAAAGAGATCGACTTCTTCTAATAACTCTTCGTCTTTGAAAAATAATGGTTCTTCCAAGTTCAACAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACCGAGCTGAAGCTGTCAAAGATTGTATTAAGTTCTTCAATTCTTCTAATTCTTCTTCAGCTGTTTGAATTTCTTTCTTCTTCTTTTTTATGCAGTGTAATTGTGTTAATGTAATCTCATGGTTCTTATAAATACTACGTTGAGTTCTTTCT

Coding sequence (CDS)

ATGTCAACAAAATTAAGCTCAGGCAGAAGAGTGAGTTTCAGCTCAGATCAGTCGGCGGCGGGGAAGTCAAGAAATAGGAAAAGGCCGATCATCGTCTTTTGGGTTTTTCGGCTGCCGAAATCCGGCAGATTCTCGCCGGAAAAGTTCCTCCGGCGGCTGGGAGCTAAAATGGCTAAAGTTCTACGGTATGTTTCGTTGAGAAAGAGATCGACTTCTTCTAATAACTCTTCGTCTTTGAAAAATAATGGTTCTTCCAAGTTCAACAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACCGAGCTGAAGCTGTCAAAGATTGTATTAAGTTCTTCAATTCTTCTAATTCTTCTTCAGCTGTTTGA

Protein sequence

MSTKLSSGRRVSFSSDQSAAGKSRNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAKMAKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFNSSNSSSAV
Homology
BLAST of MELO3C003231 vs. NCBI nr
Match: KGN54361.1 (hypothetical protein Csa_017994 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 3.0e-49
Identity = 116/123 (94.31%), Postives = 118/123 (95.93%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKSRNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAKMAKV 60
           MSTKLSSGRRVSFSSDQ+AA KSR RKRPIIVFWVFRLPKS RFSPEKFLRRLGAKMAKV
Sbjct: 1   MSTKLSSGRRVSFSSDQAAAAKSRIRKRPIIVFWVFRLPKSARFSPEKFLRRLGAKMAKV 60

Query: 61  LRYVSLRKRSTSSNNSSSLK-NNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFNSSNSS 120
           LRYVSLRKRSTSS NSSSLK NNGSSKFNRSHSVSDSMEESHRAEAVKDCI+FFNSSNSS
Sbjct: 61  LRYVSLRKRSTSSTNSSSLKNNNGSSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 120

Query: 121 SAV 123
           SAV
Sbjct: 121 SAV 123

BLAST of MELO3C003231 vs. NCBI nr
Match: XP_022950374.1 (josephin-like protein [Cucurbita moschata])

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-33
Identity = 93/129 (72.09%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKS---------RNRKRPIIVFWVFRLPKSGRFSPEKFLR 60
           MSTKLSS RRVSFSSDQ AA  +         RNRKR I VFWVFRLPKSGR  P  FLR
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAATSAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLR 60

Query: 61  RLGAKMAKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIK 120
           R+GAK+ KVLRYVSLRKRS S  +SSSLK+   S FNRSHSVS+SMEESHRAEAVKDCI 
Sbjct: 61  RIGAKVVKVLRYVSLRKRSASPASSSSLKS--GSNFNRSHSVSESMEESHRAEAVKDCIN 120

BLAST of MELO3C003231 vs. NCBI nr
Match: KAG6603596.1 (hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-33
Identity = 95/134 (70.90%), Postives = 104/134 (77.61%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKS--------RNRKRPIIVFWVFRLPKSGRFSPEKFLRR 60
           MSTKLSS RRVSFSSDQ AA  S        RNRKR I VFWVFRLPKSGR  P  FLRR
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAASAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLRR 60

Query: 61  LGAKMAKVLRYVSLRKRS------TSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAV 120
           +GAK+ KVLRYVSLRKRS      +SS++SSSLK+   S FNRSHSVS+SMEESHRAEAV
Sbjct: 61  IGAKVVKVLRYVSLRKRSASPASCSSSSSSSSLKS--GSNFNRSHSVSESMEESHRAEAV 120

BLAST of MELO3C003231 vs. NCBI nr
Match: XP_022977351.1 (uncharacterized protein LOC111477703 [Cucurbita maxima])

HSP 1 Score: 147.5 bits (371), Expect = 7.4e-32
Identity = 91/129 (70.54%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKS-------RNRKRPIIVFWVFRLPKSGRFSPEKFLRRL 60
           MSTKLSS RRVSFSSDQ AA  +       RNRKR I VFWVF+LPKSGR  P  FLRR+
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAAAAKPAAFPRNRKRLITVFWVFQLPKSGRLFPGSFLRRI 60

Query: 61  GAKMAKVLRYVSLRKRS---TSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCI 120
           GAK+ KVLRYVSLRKRS    S ++SSSLK+   S FNRSHSVS+SMEESHRAEAVKDCI
Sbjct: 61  GAKVVKVLRYVSLRKRSASPASCSSSSSLKS--GSNFNRSHSVSESMEESHRAEAVKDCI 120

BLAST of MELO3C003231 vs. NCBI nr
Match: XP_023518083.1 (uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.9 bits (346), Expect = 5.9e-29
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 0

Query: 3   TKLSSGRRVSFSSDQSAAGKS---RNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAKMAK 62
           +K+ S R VS  SD+  A  +   RNRKR I V WVFRLPKSGRFSPE FLRR+GAK+AK
Sbjct: 2   SKIRSSRGVSLRSDEGTAKPTTLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAK 61

Query: 63  VLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFNSSNSS 121
           V+RYVSL+KRS  S  +S+  N     FNRSHSVSDSMEESHRAEAVKDCI FFNSS+SS
Sbjct: 62  VVRYVSLKKRSECSKKASAATN-----FNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSS 117

BLAST of MELO3C003231 vs. ExPASy TrEMBL
Match: A0A0A0L2K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 116/123 (94.31%), Postives = 118/123 (95.93%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKSRNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAKMAKV 60
           MSTKLSSGRRVSFSSDQ+AA KSR RKRPIIVFWVFRLPKS RFSPEKFLRRLGAKMAKV
Sbjct: 1   MSTKLSSGRRVSFSSDQAAAAKSRIRKRPIIVFWVFRLPKSARFSPEKFLRRLGAKMAKV 60

Query: 61  LRYVSLRKRSTSSNNSSSLK-NNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFNSSNSS 120
           LRYVSLRKRSTSS NSSSLK NNGSSKFNRSHSVSDSMEESHRAEAVKDCI+FFNSSNSS
Sbjct: 61  LRYVSLRKRSTSSTNSSSLKNNNGSSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 120

Query: 121 SAV 123
           SAV
Sbjct: 121 SAV 123

BLAST of MELO3C003231 vs. ExPASy TrEMBL
Match: A0A6J1GFL9 (josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 5.0e-34
Identity = 93/129 (72.09%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKS---------RNRKRPIIVFWVFRLPKSGRFSPEKFLR 60
           MSTKLSS RRVSFSSDQ AA  +         RNRKR I VFWVFRLPKSGR  P  FLR
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAATSAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLR 60

Query: 61  RLGAKMAKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIK 120
           R+GAK+ KVLRYVSLRKRS S  +SSSLK+   S FNRSHSVS+SMEESHRAEAVKDCI 
Sbjct: 61  RIGAKVVKVLRYVSLRKRSASPASSSSLKS--GSNFNRSHSVSESMEESHRAEAVKDCIN 120

BLAST of MELO3C003231 vs. ExPASy TrEMBL
Match: A0A6J1IJN3 (uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.6e-32
Identity = 91/129 (70.54%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQSAAGKS-------RNRKRPIIVFWVFRLPKSGRFSPEKFLRRL 60
           MSTKLSS RRVSFSSDQ AA  +       RNRKR I VFWVF+LPKSGR  P  FLRR+
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAAAAKPAAFPRNRKRLITVFWVFQLPKSGRLFPGSFLRRI 60

Query: 61  GAKMAKVLRYVSLRKRS---TSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCI 120
           GAK+ KVLRYVSLRKRS    S ++SSSLK+   S FNRSHSVS+SMEESHRAEAVKDCI
Sbjct: 61  GAKVVKVLRYVSLRKRSASPASCSSSSSLKS--GSNFNRSHSVSESMEESHRAEAVKDCI 120

BLAST of MELO3C003231 vs. ExPASy TrEMBL
Match: A0A061EQH2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.4e-13
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 0

Query: 7   SGRRVSFSSDQS-----------AAGKSR-NRKRPIIVFWVFRLPKSGRFSPEKFLRRLG 66
           + +RVSFS D +           + G++R NR+R +   + FRL +S RFSP + LRRLG
Sbjct: 5   TSKRVSFSPDVNERPTILLKHGGSTGRTRGNRRRVVAGIFTFRLVRSSRFSPARLLRRLG 64

Query: 67  AKMAKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFN 121
           AK+A+ LR+VS+R+ S S   SSS     SS   RS S+++S+ +SHRAEA++DCI+F N
Sbjct: 65  AKVARALRFVSMRRNSNSHKVSSS-----SSNLARSRSLAESI-DSHRAEAIEDCIEFLN 124

BLAST of MELO3C003231 vs. ExPASy TrEMBL
Match: A5C5R3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g01950 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.2e-12
Identity = 50/120 (41.67%), Postives = 73/120 (60.83%), Query Frame = 0

Query: 7   SGRRVSFSSD----------QSAAGKSRNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAK 66
           + +RVSFS D               ++   +R + V W FRLP+S  FSP +FLRRLG +
Sbjct: 5   ASKRVSFSPDVNDKPTMLLKHGGCSRASGHRRRVAVIWSFRLPRSSSFSPARFLRRLGDR 64

Query: 67  MAKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFNSS 117
           + + LR++S+R+RS+   +SSSL         RS S+ D + +SHRAEA++DCI+F NSS
Sbjct: 65  VVRALRFMSMRRRSSRRVSSSSL--------TRSRSLVDPI-DSHRAEAIEDCIEFLNSS 115

BLAST of MELO3C003231 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-07
Identity = 38/125 (30.40%), Postives = 63/125 (50.40%), Query Frame = 0

Query: 9   RRVSFSSDQSAA-----------GKSRNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAKM 68
           +RVSF+ +  A              S + +R +++  +         +  K ++R+GA+ 
Sbjct: 7   KRVSFNPNPEATDEPIFPKHDGLSSSHHSRRRVVLVGILSFGLRSSPAARKLIQRIGARF 66

Query: 69  AKVLRYVSLRKRSTSSNNSSSL------KNNGSSKFNRSHSVSDSMEESHRAEAVKDCIK 117
           AK LR++S R+ +T    +SS        ++ SS      S S +  ESHRAEA++DCI+
Sbjct: 67  AKTLRFISFRRNTTDRRKTSSFLLPSSSSSSSSSAIYMKRSKSVNETESHRAEAIEDCIE 126

BLAST of MELO3C003231 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 4.4e-06
Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 0

Query: 7   SGRRVSFSSDQSA---------AGKSRNRKRPIIVFWVFRLPKSGRFSPEKFLRRLGAKM 66
           + +RV FS D  A         +     R+R ++  + F    S   + ++ LR +G ++
Sbjct: 5   ASKRVRFSPDPEANDELIFPTHSSSRHGRRRVVVGIFSFSFSDSPA-TTKRLLRSIGDRV 64

Query: 67  AKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDSMEESHRAEAVKDCIKFFNSSN 121
            K  RY+S  + +T +  SSS   + S    +S S++ S  ESHRAEA++DCI+F NS +
Sbjct: 65  GKTFRYISFGRMNTKTTPSSSSNVSSSLYLMKSKSLNGS--ESHRAEAIEDCIEFLNSCS 124

BLAST of MELO3C003231 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 42.4 bits (98), Expect = 3.1e-04
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 37  RLPKSGRFSPEKFLRRLGAKMAKVLRYVSLRKRSTSSNNSSSLKNNGSSKFNRSHSVSDS 96
           RLP+    +  K ++ LG K AK LR V +RK+  S  +  S  +  S        +   
Sbjct: 44  RLPRKTEVTAAKLIKHLGCKFAKGLRLVVMRKKKRSPPSKVSSFSGRSQP-----PIIPI 103

Query: 97  MEESHRAEAVKDCIKFFNSSNS 119
             +SHR+EA++DCI+F NSS+S
Sbjct: 104 NNDSHRSEAIEDCIQFINSSSS 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54361.13.0e-4994.31hypothetical protein Csa_017994 [Cucumis sativus][more]
XP_022950374.11.0e-3372.09josephin-like protein [Cucurbita moschata][more]
KAG6603596.13.0e-3370.90hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022977351.17.4e-3270.54uncharacterized protein LOC111477703 [Cucurbita maxima][more]
XP_023518083.15.9e-2966.94uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L2K71.5e-4994.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1[more]
A0A6J1GFL95.0e-3472.09josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1[more]
A0A6J1IJN33.6e-3270.54uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703... [more]
A0A061EQH26.4e-1346.03Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1[more]
A5C5R39.2e-1241.67Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g01950 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G09032.15.2e-0730.40unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G01225.14.4e-0632.52unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G07300.13.1e-0436.59josephin protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..91
NoneNo IPR availablePANTHERPTHR34355:SF1JOSEPHIN-LIKE PROTEINcoord: 1..120
NoneNo IPR availablePANTHERPTHR34355JOSEPHIN-LIKE PROTEINcoord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003231.1MELO3C003231.1mRNA