MELO3C003209 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003209
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 31747930 .. 31748085 (-)
RNA-Seq Expression	MELO3C003209
Synteny	MELO3C003209

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAATGAGATCTGTAGTTGGAGTTTTAAAGAGATCAATGAAGAACAAAGAGATTTACGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGCCAGCGAAGACGGAGTATTTGAATAAGAAAGGAGACAACGCGTTATTTTGA

mRNA sequence

ATGGGAGAAATGAGATCTGTAGTTGGAGTTTTAAAGAGATCAATGAAGAACAAAGAGATTTACGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGCCAGCGAAGACGGAGTATTTGAATAAGAAAGGAGACAACGCGTTATTTTGA

Coding sequence (CDS)

ATGGGAGAAATGAGATCTGTAGTTGGAGTTTTAAAGAGATCAATGAAGAACAAAGAGATTTACGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGCCAGCGAAGACGGAGTATTTGAATAAGAAAGGAGACAACGCGTTATTTTGA

Protein sequence

MGEMRSVVGVLKRSMKNKEIYVEEEEEEEEEEEEKPAKTEYLNKKGDNALF

Homology

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BLAST of MELO3C003209 vs. ExPASy TrEMBL
Match: A0A0A0L172 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304830 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.8e-08
Identity = 50/103 (48.54%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 1   MGEMRSVVGVLKRSMKNKEIYV-------------------------------------- 52
           MGEMRSV GVLKRSMKNKEIYV                                      
Sbjct: 1   MGEMRSVDGVLKRSMKNKEIYVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60

The following BLAST results are available for this feature:

BLAST of MELO3C003209 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C003209 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C003209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L172	5.8e-08	48.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304830 PE=4 SV=1	[more]

BLAST of MELO3C003209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003209.1	MELO3C003209.1	mRNA