MELO3C003132 (gene) Melon (DHL92) v4

Overview
NameMELO3C003132
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr08: 30971605 .. 30972592 (+)
RNA-Seq ExpressionMELO3C003132
SyntenyMELO3C003132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAATCAGGAAGCTTTGAGTTATCGACAAGAAATTCAAAAGAAAACTTAAAGTTTCTAAGTTTAATTTACTTCAAAAGAAAAATGGCAAACTGTCCCTGTGGCTCAGCCTGCAACTGCACTCCCAACAACTGCTCGTAAGTCTCTTCTCTTTGTTTCTCCAAAAGAAAATTTGTTTGTTTCTTCGGAATTTGGTTTCCTCGTGAATTTTTTTGGTTATTCTATACAATTCCTTTGTTCTTTTATTGTTTGTGAAAAAGTCAGGAAGTTGATAGATTTTTTTTTTCTTTAATTGCAGATGCAACCATAATGTTGCTTCCATGAAAGAGTACGAACTTTCCATCCCATATTTTCTTTTTGTTTATTTTATTATACATGCTTTCCATATGAAAAACATGAATAGAGATTAAAACGATGAGAAACCACTTCTCTAATTTTTATTAATCATTCCAGTTAAGGGTAGTCGTATACACAATTTTAAAATACAACAATTTTAACTAAAACGAAGTCTTAATAGGGCATTTAAATATATTCACTTGTGGAAGTTTATGATCTAAATAAATAAAATTGAACTATTTTTGACAAGCAGGAACTTCGAAGGTGATTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCAATCCATGCAACTGCTAAATTTCAAAGCTTTCGATATGGAAAGCATACTAATTTACATATTAATGTGCTTCTAATGATTTGAATTATGTATCAAATGGTTGTGTGTGTGTATGTTGTTTGTCTGTATGGTGTTTGACAAAATGCCGCTTACAAATACTTGAGAAATAAAATACCACACAACAACCTATTATTATATAATACTTGTATCTTGTTTTTTCCCCCTTCCAATGTCATTTCAAATAGGCCAGTTATGACTGGTTAATTTCTATTACTACTTTGCATCTATGATGTTGGATTCTTGTTTCTAATTTGATCTTTTAAGGTTTCATTACCTTTTATAT

mRNA sequence

TGGAAATCAGGAAGCTTTGAGTTATCGACAAGAAATTCAAAAGAAAACTTAAAGTTTCTAAGTTTAATTTACTTCAAAAGAAAAATGGCAAACTGTCCCTGTGGCTCAGCCTGCAACTGCACTCCCAACAACTGCTCATGCAACCATAATGTTGCTTCCATGAAAGAGAACTTCGAAGGTGATTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCAATCCATGCAACTGCTAAATTTCAAAGCTTTCGATATGGAAAGCATACTAATTTACATATTAATGTGCTTCTAATGATTTGAATTATGTATCAAATGGTTGTGTGTGTGTATGTTGTTTGTCTGTATGGTGTTTGACAAAATGCCGCTTACAAATACTTGAGAAATAAAATACCACACAACAACCTATTATTATATAATACTTGTATCTTGTTTTTTCCCCCTTCCAATGTCATTTCAAATAGGCCAGTTATGACTGGTTAATTTCTATTACTACTTTGCATCTATGATGTTGGATTCTTGTTTCTAATTTGATCTTTTAAGGTTTCATTACCTTTTATAT

Coding sequence (CDS)

ATGGCAAACTGTCCCTGTGGCTCAGCCTGCAACTGCACTCCCAACAACTGCTCATGCAACCATAATGTTGCTTCCATGAAAGAGAACTTCGAAGGTGATTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCAATCCATGCAACTGCTAA

Protein sequence

MANCPCGSACNCTPNNCSCNHNVASMKENFEGDCGCNKCSCGDNCKCNPCNC
Homology
[Close]
BLAST of MELO3C003132 vs. NCBI nr
Match: KAE8649531.1 (hypothetical protein Csa_017930, partial [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-21
Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 1  MANCPCGSACNCTPNNCSCNHNVASMKENFEGDCGCNKCSCGDNCKCNPCNC 53
          MANCPCGSACNC+PNNC+CNHNVASMKEN EG+CGCNKCSCGDNC CNPCNC
Sbjct: 43 MANCPCGSACNCSPNNCTCNHNVASMKENLEGNCGCNKCSCGDNCSCNPCNC 94

[Close]
BLAST of MELO3C003132 vs. NCBI nr
Match: XP_022966636.1 (uncharacterized protein LOC111466261 isoform X2 [Cucurbita maxima])

HSP 1 Score: 60.1 bits (144), Expect = 6.6e-06
Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 1   MANCPCGSACNCTPNNCSCNHNVAS-MKENFEGDCGCNKCSCGDNCKCNPCNC 53
           M  C CGSACNC  NNCSC H+ A  MK+N  G      C CG NC C+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKQNLSGG-----CKCGANCSCDPCNC 100

[Close]
BLAST of MELO3C003132 vs. NCBI nr
Match: XP_022966635.1 (uncharacterized protein LOC111466261 isoform X1 [Cucurbita maxima])

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-04
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0 

Query: 1   MANCPCGSACNCTPNNCSCNHNVASMKENFEGDCGCNKCSCGDNCKCNPCNC 53
           M  C CGSACNC  NNCSC H+ A + ++     G   C CG NC C+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKHRNLSGG---CKCGANCSCDPCNC 101

[Close]
BLAST of MELO3C003132 vs. ExPASy TrEMBL
Match: A0A6J1HPV6 (uncharacterized protein LOC111466261 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466261 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-06
Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 1   MANCPCGSACNCTPNNCSCNHNVAS-MKENFEGDCGCNKCSCGDNCKCNPCNC 53
           M  C CGSACNC  NNCSC H+ A  MK+N  G      C CG NC C+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKQNLSGG-----CKCGANCSCDPCNC 100

[Close]
BLAST of MELO3C003132 vs. ExPASy TrEMBL
Match: A0A6J1HS62 (uncharacterized protein LOC111466261 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466261 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-04
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0 

Query: 1   MANCPCGSACNCTPNNCSCNHNVASMKENFEGDCGCNKCSCGDNCKCNPCNC 53
           M  C CGSACNC  NNCSC H+ A + ++     G   C CG NC C+PCNC
Sbjct: 53  MPKCGCGSACNCDLNNCSCKHDAAPIMKHRNLSGG---CKCGANCSCDPCNC 101

The following BLAST results are available for this feature:
BLAST of MELO3C003132 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649531.11.9e-2190.38hypothetical protein Csa_017930, partial [Cucumis sativus][more]
XP_022966636.16.6e-0656.60uncharacterized protein LOC111466261 isoform X2 [Cucurbita maxima][more]
XP_022966635.12.1e-0451.92uncharacterized protein LOC111466261 isoform X1 [Cucurbita maxima][more]
BLAST of MELO3C003132 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C003132 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HPV63.2e-0656.60uncharacterized protein LOC111466261 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HS621.0e-0451.92uncharacterized protein LOC111466261 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of MELO3C003132 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003132.1MELO3C003132.1mRNA