Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTCAGAATTCCAAGAAATCTCCCCCAGGCCCCCCCTCCCTTTGCCTGACCATCAGATTTCCTTGATCCGCCTCGACCACATCGACTTCCTTTTCGATTCCTTCTCCAGCTCCATCACTACTCCACCTTCTCTCCCCTCCCCTTCCGATTCCATACAAGATCAACCACCTGTTTCCATCTCCGCCGTTGATGACGATGAAGAACATAGCGACGGTTTCACAACCCCCATCTCTTCACATCATAAGATTCCTGTCATTCCACACTGTCCCCCGGCTCCTTCAAGACCCAAACCCATCTCCTTGTCCAGAACGTTGTCCGCGCGAGCCTCCGCCGTTCGTAGAGGTTTTCTAGTGTATATCTCCGACGAGATCGTTGATTCCATCTTTTCCGATGATTTGCTGCATCATAAGAGTAAGAAAGCTCGGAAAGACGACGATAATGGCGGTGAATGA
mRNA sequence
ATGACCTCAGAATTCCAAGAAATCTCCCCCAGGCCCCCCCTCCCTTTGCCTGACCATCAGATTTCCTTGATCCGCCTCGACCACATCGACTTCCTTTTCGATTCCTTCTCCAGCTCCATCACTACTCCACCTTCTCTCCCCTCCCCTTCCGATTCCATACAAGATCAACCACCTGTTTCCATCTCCGCCGTTGATGACGATGAAGAACATAGCGACGGTTTCACAACCCCCATCTCTTCACATCATAAGATTCCTGTCATTCCACACTGTCCCCCGGCTCCTTCAAGACCCAAACCCATCTCCTTGTCCAGAACGTTGTCCGCGCGAGCCTCCGCCGTTCGTAGAGGTTTTCTAGTGTATATCTCCGACGAGATCGTTGATTCCATCTTTTCCGATGATTTGCTGCATCATAAGAGTAAGAAAGCTCGGAAAGACGACGATAATGGCGGTGAATGA
Coding sequence (CDS)
ATGACCTCAGAATTCCAAGAAATCTCCCCCAGGCCCCCCCTCCCTTTGCCTGACCATCAGATTTCCTTGATCCGCCTCGACCACATCGACTTCCTTTTCGATTCCTTCTCCAGCTCCATCACTACTCCACCTTCTCTCCCCTCCCCTTCCGATTCCATACAAGATCAACCACCTGTTTCCATCTCCGCCGTTGATGACGATGAAGAACATAGCGACGGTTTCACAACCCCCATCTCTTCACATCATAAGATTCCTGTCATTCCACACTGTCCCCCGGCTCCTTCAAGACCCAAACCCATCTCCTTGTCCAGAACGTTGTCCGCGCGAGCCTCCGCCGTTCGTAGAGGTTTTCTAGTGTATATCTCCGACGAGATCGTTGATTCCATCTTTTCCGATGATTTGCTGCATCATAAGAGTAAGAAAGCTCGGAAAGACGACGATAATGGCGGTGAATGA
Protein sequence
MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVYISDEIVDSIFSDDLLHHKSKKARKDDDNGGE
Homology
BLAST of MELO3C003127 vs. NCBI nr
Match:
KAA0032644.1 (cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa] >TYK23525.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa])
HSP 1 Score: 298.1 bits (762), Expect = 4.2e-77
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS
Sbjct: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
Query: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY
Sbjct: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
Query: 121 ISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 152
ISDEIVDSIFSDDLLHHKSKKARKDDDNGGE
Sbjct: 121 ISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 151
BLAST of MELO3C003127 vs. NCBI nr
Match:
KAE8649529.1 (hypothetical protein Csa_017979 [Cucumis sativus])
HSP 1 Score: 253.8 bits (647), Expect = 9.1e-64
Identity = 134/150 (89.33%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
M SEFQEISP PLPLPDHQISLIRLDHIDFLFDSFSS T P SLPSPS S+QDQPPVS
Sbjct: 1 MASEFQEISP-GPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVS 60
Query: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
ISAVDDD+EH+DGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLS RAS VRRGFLVY
Sbjct: 61 ISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVY 120
Query: 121 ISDEIVDSIFSDDLLHHKS-KKARKDDDNG 150
ISD+IVDSIFSDDLLH KS KKARKDDDNG
Sbjct: 121 ISDQIVDSIFSDDLLHQKSKKKARKDDDNG 149
BLAST of MELO3C003127 vs. NCBI nr
Match:
XP_038877666.1 (cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida])
HSP 1 Score: 148.7 bits (374), Expect = 4.1e-32
Identity = 99/161 (61.49%), Postives = 108/161 (67.08%), Query Frame = 0
Query: 1 MTSEFQEISPRPPLPLPDHQISL--------IRLDHIDFLFDSFSSSITTPPSLPSPSDS 60
M SEFQEIS L LPD QIS RL+ IDF+F S+ P +P++
Sbjct: 1 MASEFQEIS----LTLPD-QISFSAITPQPTFRLNQIDFIF-----SLNNEPDRLAPAE- 60
Query: 61 IQDQPPVSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASA 120
SISAVDDD+ DGF TP+SS HKIPV+ HCPPAP RPKPISLSRT S RAS
Sbjct: 61 -------SISAVDDDD---DGFRTPVSSDHKIPVVRHCPPAPKRPKPISLSRTSSMRASG 120
Query: 121 VRRGFLVYISDEIVDSIFSDDLLHHKS-KKARK-DDDNGGE 152
VRRGF VYISDEIVDSIF DLLH KS KKARK DDDNGGE
Sbjct: 121 VRRGFRVYISDEIVDSIFCSDLLHQKSKKKARKDDDDNGGE 140
BLAST of MELO3C003127 vs. NCBI nr
Match:
XP_023518540.1 (uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 120.9 bits (302), Expect = 9.2e-24
Identity = 82/155 (52.90%), Postives = 97/155 (62.58%), Query Frame = 0
Query: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPS--DSIQDQPP 60
M S+F+EIS P ++ L D I+F+F + P +L S DS +
Sbjct: 62 MASQFREISLTP----ESFRVKLEDADQIEFIF----AVENRPLALESQQRCDSSAPEES 121
Query: 61 VSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFL 120
+ ISAVDD+ DGF TP SS +KIP++ HCPPAP RPKPISLSRT S R S VRRGF
Sbjct: 122 LLISAVDDE----DGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRT-SPRVSGVRRGFR 181
Query: 121 VYISDEIVDSIFS----DDLLHHKSKKARKDDDNG 150
VYISDEIVDSIFS D L HK+KKARKDD G
Sbjct: 182 VYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG 203
BLAST of MELO3C003127 vs. NCBI nr
Match:
XP_022950456.1 (uncharacterized protein LOC111453550 [Cucurbita moschata])
HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22
Identity = 87/163 (53.37%), Postives = 99/163 (60.74%), Query Frame = 0
Query: 1 MTSEFQEISP--RPPL---PLPDHQISLIRL----DHIDFLFDSFSSSITTPPSLPSPSD 60
M S FQEISP P + + Q + L + IDF+F ++ P L S S
Sbjct: 65 MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF-----ALNDDPPLASDSV 124
Query: 61 SI---QDQPPVSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSA 120
S+ + PP SIS DDD DGF TP SS HKIPV+ CPPAP RPKPIS SRTL
Sbjct: 125 SVSLDRSAPPDSIS--DDD----DGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTL-P 184
Query: 121 RASAVRRGFLVYISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 152
R S VRRGF VYISDEI DSIF DLLH K+KKARK + NGGE
Sbjct: 185 RTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK-NGNGGE 214
BLAST of MELO3C003127 vs. ExPASy TrEMBL
Match:
A0A5A7SN91 (Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00290 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS
Sbjct: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
Query: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY
Sbjct: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
Query: 121 ISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 152
ISDEIVDSIFSDDLLHHKSKKARKDDDNGGE
Sbjct: 121 ISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 151
BLAST of MELO3C003127 vs. ExPASy TrEMBL
Match:
A0A0A0KZJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295530 PE=4 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MTSEFQEISPRPPLPLPDHQISLIRLDHIDFLFDSFSSSITTPPSLPSPSDSIQDQPPVS 60
M SEFQEISP PLPLPDHQISLIRLDHIDFLFDSFSS T P SLPSPS S+QDQPPVS
Sbjct: 1 MASEFQEISP-GPLPLPDHQISLIRLDHIDFLFDSFSSISTPPNSLPSPSRSVQDQPPVS 60
Query: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSARASAVRRGFLVY 120
ISAVDDD+EH+DGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLS RAS VRRGFLVY
Sbjct: 61 ISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRASGVRRGFLVY 120
Query: 121 ISDEIVDSIFSDDLLHHKS-KKARKDDDNGGE 152
ISD+IVDSIFSDDLLH KS KKARKDDDNGGE
Sbjct: 121 ISDQIVDSIFSDDLLHQKSKKKARKDDDNGGE 151
BLAST of MELO3C003127 vs. ExPASy TrEMBL
Match:
A0A6J1GEW0 (uncharacterized protein LOC111453550 OS=Cucurbita moschata OX=3662 GN=LOC111453550 PE=4 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 6.4e-23
Identity = 87/163 (53.37%), Postives = 99/163 (60.74%), Query Frame = 0
Query: 1 MTSEFQEISP--RPPL---PLPDHQISLIRL----DHIDFLFDSFSSSITTPPSLPSPSD 60
M S FQEISP P + + Q + L + IDF+F ++ P L S S
Sbjct: 65 MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF-----ALNDDPPLASDSV 124
Query: 61 SI---QDQPPVSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSA 120
S+ + PP SIS DDD DGF TP SS HKIPV+ CPPAP RPKPIS SRTL
Sbjct: 125 SVSLDRSAPPDSIS--DDD----DGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTL-P 184
Query: 121 RASAVRRGFLVYISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 152
R S VRRGF VYISDEI DSIF DLLH K+KKARK + NGGE
Sbjct: 185 RTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK-NGNGGE 214
BLAST of MELO3C003127 vs. ExPASy TrEMBL
Match:
A0A6J1CQ22 (cyclin-dependent protein kinase inhibitor SMR2-like OS=Momordica charantia OX=3673 GN=LOC111013692 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19
Identity = 79/156 (50.64%), Postives = 88/156 (56.41%), Query Frame = 0
Query: 1 MTSEFQEI--SPRPPLPLP--DHQISLIRLD----HIDFLFDSFSSSITTPPSLPSPSDS 60
M S FQEI SP P + LP + L+ L+ IDFLF ++ T DS
Sbjct: 1 MASHFQEISLSPSPQISLPSISPESFLLNLEDANNQIDFLF-----ALNTNQQQARRDDS 60
Query: 61 IQDQPPVSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISL-SRTLSAR-A 120
I + DD DGF TP SS HKIPVI CPPAP RPKPIS SR S R A
Sbjct: 61 I---------SADD-----DGFRTPTSSDHKIPVIKQCPPAPRRPKPISCRSRRSSPRLA 120
Query: 121 SAVRRGFLVYISDEIVDSIFSDDLLHHKSKKARKDD 147
S VRRGF VYISDEIV+SIFS H K KKAR+DD
Sbjct: 121 SGVRRGFRVYISDEIVESIFSSSFAHQKMKKARRDD 137
BLAST of MELO3C003127 vs. ExPASy TrEMBL
Match:
A0A5D3AH22 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G241600v1 PE=4 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 1.3e-07
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
Query: 61 ISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLS--RTLSARASAVRRGFL 120
+ A DD ++ DGF TP S HKIPV+ CPPAP +PKP+S + S +S R L
Sbjct: 99 LKANDDGDDDDDGFKTPTSLDHKIPVMKQCPPAPRKPKPLSSKKRKPSSPPSSGGDRNLL 158
Query: 121 VYISDEIVDSIFSDDLL---HHKSKKARKDDDN 149
+ V+S+F D+L H K KKARK+D N
Sbjct: 159 KIDFAKEVESLFPSDVLADIHRKVKKARKEDYN 191
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0032644.1 | 4.2e-77 | 100.00 | cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa] >... | [more] |
| KAE8649529.1 | 9.1e-64 | 89.33 | hypothetical protein Csa_017979 [Cucumis sativus] | [more] |
| XP_038877666.1 | 4.1e-32 | 61.49 | cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida] | [more] |
| XP_023518540.1 | 9.2e-24 | 52.90 | uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022950456.1 | 1.3e-22 | 53.37 | uncharacterized protein LOC111453550 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SN91 | 2.0e-77 | 100.00 | Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa ... | [more] |
| A0A0A0KZJ9 | 3.1e-65 | 89.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295530 PE=4 SV=1 | [more] |
| A0A6J1GEW0 | 6.4e-23 | 53.37 | uncharacterized protein LOC111453550 OS=Cucurbita moschata OX=3662 GN=LOC1114535... | [more] |
| A0A6J1CQ22 | 2.5e-19 | 50.64 | cyclin-dependent protein kinase inhibitor SMR2-like OS=Momordica charantia OX=36... | [more] |
| A0A5D3AH22 | 1.3e-07 | 44.09 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G241600v1 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
