MELO3C003114 (gene) Melon (DHL92) v4

Overview


Name	MELO3C003114
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ATP synthase
Location	chr08: 30767845 .. 30769169 (+)
RNA-Seq Expression	MELO3C003114
Synteny	MELO3C003114

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAATCCCCTTTTTTTCACTTGCGAAAGAGACGAACAAACGCAAAACAGTCGAAGGAAGATGAGGAAATTCGATCCATGGCCGGTGTTTTTCAGGCGAGAATGGAAGAGGAACTGGCCGTTCCTTGTTGGTTTCGCCATAACTGGCGCCGCAATTACCAAGATGACTGCCGGATTTTCTGGTACGATCGTCGATTATCATTCTTTCTTGTTATTTCTTCTCGATTCTTCGTTCTTTTTTTTTTTTTTTTTTTTGGTTATTTGTTTAGTTTAATTTGAATCCTTCACTTCTTTATGTTACTGATTCTCTCGTGGATTAATTTTCAGAGGAAGAGGTGAAGAATTCTCCCTTCGTGCAGAGGCACAATCGGTATTTTCTCGGAACCCTAATTTACGCACATCTTCTTGGATTTGCATATCAATTAGATCTAGTATCTCATATGGTTTCGTTTGTCTGTTGATTTGTGTTTTTAATATGTAAAATCCACAAATCTTTTGAAGATGATTGTAGATTTTGATATTGGGTTTCTGATTTCTGATTTGGGGTTTCTACATTTACATGAGTGTGGCAGTCATAAATTGTTTCAATGTTGCTTATTTCTCACTAATGGCTATTCTTTTTTAGTGAGAATTGAGCATTTTTACCATAATCTTGTAGTAATTAAGCTTCTTTTTCTCTAGATGTTATTGTAGAATCACATATATTGTTTATGTTCTAGAGATTTTACATTCGAGCATACTTATATTTCTACAGCTGACAGATATATTGGTTTTTCAGTAATTGTTCTCTAGATTGTTGATTTAGAACATAGGAATGTGCTTGACAAGCTAATGCTGTGCCTGCTGCAGGTGAATCCTTTAATGGGGAGATTAGTGGCATTGGAAAATGTGAGATGTTTTTCATTTGTGCAAAATAACAGATGCTGCCGTTAGTTTACCAGCCATTTGAATCAAGCTTTATTGGTACTTCTCAGTATGTATCAATACTTGGATGGATTTTTTGTGATGTTGTTTACTTCTTATATATGAACATGAATTCTTTTTTCGTAGCATCTGGGTTGCAAGCTTTTCCCTTCTTTAATTTGGAATGCTAGAAACCTGTTCATGTACTGATTAGTACTTGTCGTATAAAAGCTTACATGAATTTCCAGATTGGGTAACTCTCATCTGGACTGGCTGAGATCAAGGAATTCTTTCATAGAACTATTTTATTTTTCGTAAGAGCAAAATGTTAGTAGTTTTTTGATTTCATTTTGGTGATGTTTGAAAAAGTACTCATACTCTCTTCTAAACATTCATACTTAGAACAGTGTGGTAGTGTCTTT

mRNA sequence

AAGAAATCCCCTTTTTTTCACTTGCGAAAGAGACGAACAAACGCAAAACAGTCGAAGGAAGATGAGGAAATTCGATCCATGGCCGGTGTTTTTCAGGCGAGAATGGAAGAGGAACTGGCCGTTCCTTGTTGGTTTCGCCATAACTGGCGCCGCAATTACCAAGATGACTGCCGGATTTTCTGAGGAAGAGGTGAAGAATTCTCCCTTCGTGCAGAGGCACAATCGTAATTGTTCTCTAGATTGTTGATTTAGAACATAGGAATGTGCTTGACAAGCTAATGCTGTGCCTGCTGCAGGTGAATCCTTTAATGGGGAGATTAGTGGCATTGGAAAATGTGAGATGTTTTTCATTTGTGCAAAATAACAGATGCTGCCGTTAGTTTACCAGCCATTTGAATCAAGCTTTATTGGTACTTCTCAGTATGTATCAATACTTGGATGGATTTTTTGTGATGTTGTTTACTTCTTATATATGAACATGAATTCTTTTTTCGTAGCATCTGGGTTGCAAGCTTTTCCCTTCTTTAATTTGGAATGCTAGAAACCTGTTCATGTACTGATTAGTACTTGTCGTATAAAAGCTTACATGAATTTCCAGATTGGGTAACTCTCATCTGGACTGGCTGAGATCAAGGAATTCTTTCATAGAACTATTTTATTTTTCGTAAGAGCAAAATGTTAGTAGTTTTTTGATTTCATTTTGGTGATGTTTGAAAAAGTACTCATACTCTCTTCTAAACATTCATACTTAGAACAGTGTGGTAGTGTCTTT

Coding sequence (CDS)

ATGAGGAAATTCGATCCATGGCCGGTGTTTTTCAGGCGAGAATGGAAGAGGAACTGGCCGTTCCTTGTTGGTTTCGCCATAACTGGCGCCGCAATTACCAAGATGACTGCCGGATTTTCTGAGGAAGAGGTGAAGAATTCTCCCTTCGTGCAGAGGCACAATCGTAATTGTTCTCTAGATTGTTGA

Protein sequence

MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNRNCSLDC

Homology

[Close]

BLAST of MELO3C003114 vs. NCBI nr
Match: XP_008447675.1 (PREDICTED: uncharacterized protein LOC103490081 [Cucumis melo] >KAA0032622.1 uncharacterized protein E6C27_scaffold184G00070 [Cucumis melo var. makuwa] >TYK23504.1 uncharacterized protein E5676_scaffold500G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 7.5e-25
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. NCBI nr
Match: KAE8649524.1 (hypothetical protein Csa_017989, partial [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MRKFDPWPVFFRREWKRNWPFLVGFAITG+ ITKMTAGF+EEEVKNSPFVQRHNR
Sbjct: 11 MRKFDPWPVFFRREWKRNWPFLVGFAITGSLITKMTAGFTEEEVKNSPFVQRHNR 65

[Close]

BLAST of MELO3C003114 vs. NCBI nr
Match: XP_022949912.1 (uncharacterized protein LOC111453167 isoform X1 [Cucurbita moschata] >XP_022949913.1 uncharacterized protein LOC111453167 isoform X1 [Cucurbita moschata])

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-23
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR+FDPWPVFFRREWKRNWPFLVGFAITG  ITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRQFDPWPVFFRREWKRNWPFLVGFAITGTIITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. NCBI nr
Match: XP_022949914.1 (uncharacterized protein LOC111453167 isoform X2 [Cucurbita moschata] >XP_022949915.1 uncharacterized protein LOC111453167 isoform X2 [Cucurbita moschata])

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-23
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR+FDPWPVFFRREWKRNWPFLVGFAITG  ITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRQFDPWPVFFRREWKRNWPFLVGFAITGTIITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. NCBI nr
Match: XP_022978952.1 (uncharacterized protein LOC111478752 isoform X1 [Cucurbita maxima] >XP_023543215.1 uncharacterized protein LOC111803160 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-23
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR+FDPWPVFFRREWKRNWPFLVGFAITG  ITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRQFDPWPVFFRREWKRNWPFLVGFAITGTLITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. ExPASy Swiss-Prot
Match: P80497 (ATP synthase 6 kDa subunit, mitochondrial (Fragment) OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-06
Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGF 26
          MR+FDPWPVFFRREW RN PFLV F
Sbjct: 1  MRQFDPWPVFFRREWSRNQPFLVXF 25

[Close]

BLAST of MELO3C003114 vs. ExPASy TrEMBL
Match: A0A5A7SNJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00070 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. ExPASy TrEMBL
Match: A0A1S3BIW2 (uncharacterized protein LOC103490081 OS=Cucumis melo OX=3656 GN=LOC103490081 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. ExPASy TrEMBL
Match: A0A0A0KZI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294910 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.8e-24
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MRKFDPWPVFFRREWKRNWPFLVGFAITG+ ITKMTAGF+EEEVKNSPFVQRHNR
Sbjct: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGSLITKMTAGFTEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. ExPASy TrEMBL
Match: A0A6J1GEA3 (uncharacterized protein LOC111453167 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453167 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR+FDPWPVFFRREWKRNWPFLVGFAITG  ITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRQFDPWPVFFRREWKRNWPFLVGFAITGTIITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. ExPASy TrEMBL
Match: A0A6J1GDE4 (uncharacterized protein LOC111453167 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453167 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR+FDPWPVFFRREWKRNWPFLVGFAITG  ITKMTAGFSEEEVKNSPFVQRHNR
Sbjct: 1  MRQFDPWPVFFRREWKRNWPFLVGFAITGTIITKMTAGFSEEEVKNSPFVQRHNR 55

[Close]

BLAST of MELO3C003114 vs. TAIR 10
Match: AT3G46430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59613.2); Has 51 Blast hits to 51 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 9.1e-21
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR FDPWPVFF+REWKR WPFL GFA+TG  ITK+TAG +EE+ KNS FVQ+H R
Sbjct: 1  MRLFDPWPVFFKREWKRCWPFLTGFAVTGVLITKLTAGLTEEDAKNSKFVQQHRR 55

[Close]

BLAST of MELO3C003114 vs. TAIR 10
Match: AT5G59613.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 9.1e-21
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR FDPWPVFF+REWKR WPFL GFA+TG  ITK+TAG +EE+ KNS FVQ+H R
Sbjct: 1  MRLFDPWPVFFKREWKRCWPFLTGFAVTGVLITKLTAGLTEEDAKNSKFVQQHRR 55

[Close]

BLAST of MELO3C003114 vs. TAIR 10
Match: AT5G59613.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1). )

HSP 1 Score: 96.3 bits (238), Expect = 9.1e-21
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 1  MRKFDPWPVFFRREWKRNWPFLVGFAITGAAITKMTAGFSEEEVKNSPFVQRHNR 56
          MR FDPWPVFF+REWKR WPFL GFA+TG  ITK+TAG +EE+ KNS FVQ+H R
Sbjct: 1  MRLFDPWPVFFKREWKRCWPFLTGFAVTGVLITKLTAGLTEEDAKNSKFVQQHRR 55

The following BLAST results are available for this feature:

BLAST of MELO3C003114 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447675.1	7.5e-25	100.00	PREDICTED: uncharacterized protein LOC103490081 [Cucumis melo] >KAA0032622.1 unc...	[more]
KAE8649524.1	1.4e-23	94.55	hypothetical protein Csa_017989, partial [Cucumis sativus]	[more]
XP_022949912.1	2.4e-23	94.55	uncharacterized protein LOC111453167 isoform X1 [Cucurbita moschata] >XP_0229499...	[more]
XP_022949914.1	2.4e-23	94.55	uncharacterized protein LOC111453167 isoform X2 [Cucurbita moschata] >XP_0229499...	[more]
XP_022978952.1	2.4e-23	94.55	uncharacterized protein LOC111478752 isoform X1 [Cucurbita maxima] >XP_023543215...	[more]

BLAST of MELO3C003114 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80497	1.6e-06	84.00	ATP synthase 6 kDa subunit, mitochondrial (Fragment) OS=Solanum tuberosum OX=411...	[more]

BLAST of MELO3C003114 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNJ6	3.6e-25	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BIW2	3.6e-25	100.00	uncharacterized protein LOC103490081 OS=Cucumis melo OX=3656 GN=LOC103490081 PE=...	[more]
A0A0A0KZI3	6.8e-24	94.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294910 PE=4 SV=1	[more]
A0A6J1GEA3	1.2e-23	94.55	uncharacterized protein LOC111453167 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GDE4	1.2e-23	94.55	uncharacterized protein LOC111453167 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C003114 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46430.1	9.1e-21	72.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59613.1	9.1e-21	72.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G59613.2	9.1e-21	72.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34565	TRANSMEMBRANE PROTEIN	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003114.1	MELO3C003114.1	mRNA