MELO3C003065 (gene) Melon (DHL92) v4

Overview
NameMELO3C003065
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr09: 11055835 .. 11056029 (+)
RNA-Seq ExpressionMELO3C003065
SyntenyMELO3C003065
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCATTCAAAGGAGTCTGAAGACGCAACACAAACCTCTAATGTGTCGCCTAGAAAAGAAATCCTGGAGAAGGTAGTGGTTGATGACCCACTCCTCAAAGGAAAGCAACCTGCCCCTGAGGACGCTGGTGACACGTACCTCCCTTTGTCGCCAAAGCAAACCATAAAGGCATCAACACAACAAGCCAAGTAG

mRNA sequence

ATGATTCATTCAAAGGAGTCTGAAGACGCAACACAAACCTCTAATGTGTCGCCTAGAAAAGAAATCCTGGAGAAGGTAGTGGTTGATGACCCACTCCTCAAAGGAAAGCAACCTGCCCCTGAGGACGCTGGTGACACGTACCTCCCTTTGTCGCCAAAGCAAACCATAAAGGCATCAACACAACAAGCCAAGTAG

Coding sequence (CDS)

ATGATTCATTCAAAGGAGTCTGAAGACGCAACACAAACCTCTAATGTGTCGCCTAGAAAAGAAATCCTGGAGAAGGTAGTGGTTGATGACCCACTCCTCAAAGGAAAGCAACCTGCCCCTGAGGACGCTGGTGACACGTACCTCCCTTTGTCGCCAAAGCAAACCATAAAGGCATCAACACAACAAGCCAAGTAG

Protein sequence

MIHSKESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK
Homology
BLAST of MELO3C003065 vs. NCBI nr
Match: KAA0056630.1 (hypothetical protein E6C27_scaffold288G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 5   KESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK 64
           K S+DA+QTS VSP KE+LEK  VDDPL KGK+   E AG T LPL PKQT + +TQ AK
Sbjct: 110 KASDDASQTSVVSPSKEVLEK-AVDDPLQKGKETTSEAAGKTSLPLLPKQTREPATQNAK 168

BLAST of MELO3C003065 vs. NCBI nr
Match: TYK25887.1 (hypothetical protein E5676_scaffold436G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-05
Identity = 36/60 (60.00%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 5  KESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK 64
          KESED  QT   S  KE LE  V+DD LLK KQ A EDAG T+   SPKQT KA+TQ  K
Sbjct: 36 KESEDVAQTPVASSNKETLEN-VIDDLLLKRKQIASEDAGKTFQHSSPKQTPKATTQNTK 94

BLAST of MELO3C003065 vs. NCBI nr
Match: KAA0046249.1 (hypothetical protein E6C27_scaffold284G00470 [Cucumis melo var. makuwa] >TYK18949.1 hypothetical protein E5676_scaffold418G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 4   SKESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQA 63
           ++     T+ + +SPR+E+L+K  VDDPL KGKQ   ++ G T LP SP+QT KAS Q A
Sbjct: 102 TRRKNKGTEDAKLSPRREVLDK-EVDDPLQKGKQTTHKEVGATSLPSSPRQTPKASMQNA 161

Query: 64  K 65
           K
Sbjct: 162 K 161

BLAST of MELO3C003065 vs. NCBI nr
Match: KAA0048550.1 (hypothetical protein E6C27_scaffold61G001820 [Cucumis melo var. makuwa] >TYK28352.1 hypothetical protein E5676_scaffold600G001900 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 16  VSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK 65
           ++P   +LEK VVDDPLLKGKQPAPED G+T+LP   K++ +A+TQ  K
Sbjct: 154 LAPIDGLLEK-VVDDPLLKGKQPAPEDTGETHLPSPLKKSSQATTQDIK 201

BLAST of MELO3C003065 vs. ExPASy TrEMBL
Match: A0A5A7UNI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001510 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-08
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 5   KESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK 64
           K S+DA+QTS VSP KE+LEK  VDDPL KGK+   E AG T LPL PKQT + +TQ AK
Sbjct: 110 KASDDASQTSVVSPSKEVLEK-AVDDPLQKGKETTSEAAGKTSLPLLPKQTREPATQNAK 168

BLAST of MELO3C003065 vs. ExPASy TrEMBL
Match: A0A5D3DQD9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001130 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-05
Identity = 36/60 (60.00%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 5  KESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK 64
          KESED  QT   S  KE LE  V+DD LLK KQ A EDAG T+   SPKQT KA+TQ  K
Sbjct: 36 KESEDVAQTPVASSNKETLEN-VIDDLLLKRKQIASEDAGKTFQHSSPKQTPKATTQNTK 94

BLAST of MELO3C003065 vs. ExPASy TrEMBL
Match: A0A5D3D5W3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00360 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 4   SKESEDATQTSNVSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQA 63
           ++     T+ + +SPR+E+L+K  VDDPL KGKQ   ++ G T LP SP+QT KAS Q A
Sbjct: 102 TRRKNKGTEDAKLSPRREVLDK-EVDDPLQKGKQTTHKEVGATSLPSSPRQTPKASMQNA 161

Query: 64  K 65
           K
Sbjct: 162 K 161

BLAST of MELO3C003065 vs. ExPASy TrEMBL
Match: A0A5A7TZH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001900 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 16  VSPRKEILEKVVVDDPLLKGKQPAPEDAGDTYLPLSPKQTIKASTQQAK 65
           ++P   +LEK VVDDPLLKGKQPAPED G+T+LP   K++ +A+TQ  K
Sbjct: 154 LAPIDGLLEK-VVDDPLLKGKQPAPEDTGETHLPSPLKKSSQATTQDIK 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056630.11.5e-0763.33hypothetical protein E6C27_scaffold288G001510 [Cucumis melo var. makuwa][more]
TYK25887.15.3e-0560.00hypothetical protein E5676_scaffold436G001130 [Cucumis melo var. makuwa][more]
KAA0046249.12.6e-0449.18hypothetical protein E6C27_scaffold284G00470 [Cucumis melo var. makuwa] >TYK1894... [more]
KAA0048550.13.4e-0459.18hypothetical protein E6C27_scaffold61G001820 [Cucumis melo var. makuwa] >TYK2835... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UNI47.2e-0863.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DQD92.6e-0560.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D5W31.3e-0449.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TZH81.7e-0459.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003065.1MELO3C003065.1mRNA