MELO3C003042 (gene) Melon (DHL92) v4

Overview
NameMELO3C003042
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionChromo domain-containing protein
Locationchr09: 10571173 .. 10571352 (+)
RNA-Seq ExpressionMELO3C003042
SyntenyMELO3C003042
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTCACATTCAACCAGCGTCTCATCACCATCTCGCCTAGACTTGGAATTCTCCCCTTGCCAAGACTAGGGATTCATGTTCAACCAGCTTCTCGTGAGTTACCAGAGACTTCCACCAACGTCCAACATCAAAACATAGCACAACTCGCTCCGACTTGGGGTTCTCTCCTCGCCTAA

mRNA sequence

ATGGGATTCACATTCAACCAGCGTCTCATCACCATCTCGCCTAGACTTGGAATTCTCCCCTTGCCAAGACTAGGGATTCATGTTCAACCAGCTTCTCGTGAGTTACCAGAGACTTCCACCAACGTCCAACATCAAAACATAGCACAACTCGCTCCGACTTGGGGTTCTCTCCTCGCCTAA

Coding sequence (CDS)

ATGGGATTCACATTCAACCAGCGTCTCATCACCATCTCGCCTAGACTTGGAATTCTCCCCTTGCCAAGACTAGGGATTCATGTTCAACCAGCTTCTCGTGAGTTACCAGAGACTTCCACCAACGTCCAACATCAAAACATAGCACAACTCGCTCCGACTTGGGGTTCTCTCCTCGCCTAA

Protein sequence

MGFTFNQRLITISPRLGILPLPRLGIHVQPASRELPETSTNVQHQNIAQLAPTWGSLLA
Homology
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BLAST of MELO3C003042 vs. ExPASy TrEMBL
Match: A0A5A7TDW2 (Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00680 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-04
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 1   MGFTFNQRLITISPRLGILPLPRLGIHVQPASRELPE 38
           +GF FNQ L+TI PR GILP  R GIH QPA+ ELP+
Sbjct: 81  LGFAFNQCLVTILPRHGILPSSRFGIHNQPATHELPD 117

The following BLAST results are available for this feature:
BLAST of MELO3C003042 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C003042 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C003042 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TDW25.8e-0464.86Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
BLAST of MELO3C003042 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003042.1MELO3C003042.1mRNA