MELO3C003023.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C003023.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTranslocase subunit seca
Locationchr09: 10489852 .. 10491255 (-)
RNA-Seq ExpressionMELO3C003023.jh1
SyntenyMELO3C003023.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCGTCTCTTTGCCCCATTCTCTCTTCTTTATGTTCTTGTTATATAACTCATAACCCACGCTCCTCCTCTCCTTTTTCTCCTAACCACAATCCTCTCTCTTCTTCTTTAGGTTTAATCTCTATATCACTTTTGTTTCTAACTTCTATGCTCTTTCACTTCAAACTTTTAATTTTTAGATCTTTGTATGTCCAGGATTGTGTTTTCAATTTTTTTTTTGGGGAAAGATGTTTCTGCTAGATCTATTGTGATTTGGGTTTTTTTTCCTTGTTAGTTTAAAAGGTTTGTTTTATCTTGTCTGTATAGGCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCGAAGCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCCAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTATGGATCTCCTCTTCTTAAAGGTACTTAATTTTCGCTTAGAGATGAATTCTATCCAATAAAAGAAAAGGATTGATGAATATTTTGTTTTTGTGTGTGTTTCTTTAGGGTGGTTGTGGTTTGGAGAAATTTAACAGTAGTAATACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGATCGCCGCCGAGCAGAGTAGCTAACCCATTGATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGACGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTAGAAAAGGTGGATGTGTCCGGGTTAACTTTGGTAACAACCCGGCGGTGAGGATCGAAGGGTTTGACTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAGAAACCCTATCCAAGCCTAGCCGAGCCGATTGAGCAATGATGATTAAGAAAACGAACACATGGATTTTAAATTTTTTTCCAACATTCAAATTTAAGATATTAAAGTACAATTTTGAAAGAAAAAAGAAACCTTTTTGTCCAAAACACCATTGTTGTAAATAATTTGGAAAGGAAATCCAAGTAAATATATGTCAAAAGAAAAAAGGGGCCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGTTTGAGAGTCCTTATTTGACCATATTGAAAAATAAGAGTCAGAGGGAGAGGGAGATTATGCTTCTCTATTTTGTAGCATATGTATGTTCTTTTTTTTCTCTTTAGGAGTGTCCAAGATTGTTTCTTTGTAGCTTAAGGGAAAACTTTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATTGAAGCTGCATAAATTCAATATTAATCATGTAAATCTTTAATGTTATAATATATATATATATATATACATATATGTATGTA

mRNA sequence

TCCCGTCTCTTTGCCCCATTCTCTCTTCTTTATGTTCTTGTTATATAACTCATAACCCACGCTCCTCCTCTCCTTTTTCTCCTAACCACAATCCTCTCTCTTCTTCTTTAGGCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCGAAGCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCCAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTATGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAAATTTAACAGTAGTAATACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGATCGCCGCCGAGCAGAGTAGCTAACCCATTGATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGACGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTAGAAAAGGTGGATGTGTCCGGGTTAACTTTGGTAACAACCCGGCGGTGAGGATCGAAGGGTTTGACTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAGAAACCCTATCCAAGCCTAGCCGAGCCGATTGAGCAATGATGATTAAGAAAACGAACACATGGATTTTAAATTTTTTTCCAACATTCAAATTTAAGATATTAAAGTACAATTTTGAAAGAAAAAAGAAACCTTTTTGTCCAAAACACCATTGTTGTAAATAATTTGGAAAGGAAATCCAAGTAAATATATGTCAAAAGAAAAAAGGGGCCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGTTTGAGAGTCCTTATTTGACCATATTGAAAAATAAGAGTCAGAGGGAGAGGGAGATTATGCTTCTCTATTTTGTAGCATATGTATGTTCTTTTTTTTCTCTTTAGGAGTGTCCAAGATTGTTTCTTTGTAGCTTAAGGGAAAACTTTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATTGAAGCTGCATAAATTCAATATTAATCATGTAAATCTTTAATGTTATAATATATATATATATATATACATATATGTATGTA

Coding sequence (CDS)

ATGAATTGGGTTTGTGAAGAGATGCGAAGCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCCAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTATGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAAATTTAACAGTAGTAATACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGATCGCCGCCGAGCAGAGTAGCTAACCCATTGATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGACGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTAGAAAAGGTGGATGTGTCCGGGTTAACTTTGGTAACAACCCGGCGGTGAGGATCGAAGGGTTTGACTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAG

Protein sequence

MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Homology
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BLAST of MELO3C003023.jh1 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 330 bits (845), Expect = 4.26e-114
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0 

Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE
Sbjct: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
           KFNSSNTQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG
Sbjct: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of MELO3C003023.jh1 vs. NCBI nr
Match: XP_004140334.1 (uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_007795 [Cucumis sativus])

HSP 1 Score: 320 bits (821), Expect = 1.95e-110
Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0 

Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE
Sbjct: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
            FNSSN QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPPLSPPPSAG
Sbjct: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           RKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of MELO3C003023.jh1 vs. NCBI nr
Match: KAA0047427.1 (uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK04136.1 uncharacterized protein E5676_scaffold2119G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 312 bits (800), Expect = 2.44e-107
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 8   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 67
           MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 68  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 127
           QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 128 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

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BLAST of MELO3C003023.jh1 vs. NCBI nr
Match: XP_038906747.1 (uncharacterized protein LOC120092671 [Benincasa hispida])

HSP 1 Score: 302 bits (774), Expect = 2.77e-103
Identity = 143/158 (90.51%), Postives = 150/158 (94.94%), Query Frame = 0 

Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEM +AA DRRER+VCPKPRRLGL+ND  NDNPFRHRFDSDA+DLLF KGGCGLE
Sbjct: 1   MNWVCEEMMTAA-DRRERLVCPKPRRLGLMNDAGNDNPFRHRFDSDALDLLFFKGGCGLE 60

Query: 61  KFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
            FNSS+TQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSAG
Sbjct: 61  NFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           RKGGCVR+NFGNNPAVRIEGFDCRLDRERRNRS+PALA
Sbjct: 121 RKGGCVRINFGNNPAVRIEGFDCRLDRERRNRSVPALA 157

[Close]
BLAST of MELO3C003023.jh1 vs. NCBI nr
Match: KAG7032498.1 (hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (655), Expect = 6.61e-85
Identity = 128/158 (81.01%), Postives = 136/158 (86.08%), Query Frame = 0 

Query: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLFLKGGC LE 
Sbjct: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLEN 75

Query: 66  FNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFST-AASPPLSPPPSAG 125
           FNSS+TQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPPS  
Sbjct: 76  FNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135

Query: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]
BLAST of MELO3C003023.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.06e-114
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0 

Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE
Sbjct: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
           KFNSSNTQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG
Sbjct: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of MELO3C003023.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 9.43e-111
Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0 

Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE
Sbjct: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
            FNSSN QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPPLSPPPSAG
Sbjct: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           RKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of MELO3C003023.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 1.18e-107
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 8   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 67
           MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 68  QLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 127
           QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 128 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

[Close]
BLAST of MELO3C003023.jh1 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 5.29e-84
Identity = 129/161 (80.12%), Postives = 137/161 (85.09%), Query Frame = 0 

Query: 4   VCEEM-RSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCG 63
           V EEM R+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC 
Sbjct: 13  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD 72

Query: 64  LEKFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFST-AASPPLSPPP 123
           LE FNSS+TQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPP
Sbjct: 73  LENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPP 132

Query: 124 SAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           S  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 133 STDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]
BLAST of MELO3C003023.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 253 bits (645), Expect = 1.07e-83
Identity = 126/158 (79.75%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC LE 
Sbjct: 16  EMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLEN 75

Query: 66  FNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFST-AASPPLSPPPSAG 125
           F SS+TQLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPPS  
Sbjct: 76  FKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135

Query: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]
BLAST of MELO3C003023.jh1 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 81/172 (47.09%), Postives = 105/172 (61.05%), Query Frame = 0 

Query: 7   EMRSAATDRRER----IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDAMDL 66
           ++RS++    ER    +VCPKPRR+GL N+  + +      F H+        ++D +D+
Sbjct: 16  DLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDI 75

Query: 67  LFLKGGCGLEKFNSSNTQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF--ST 126
           +  K G G E+ N    Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +     
Sbjct: 76  ILTKDGYGAEQVNK---QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQL 135

Query: 127 AASPPLSPPPSAGRKGGC-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
              P  SP  S+GRKGGC VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 136 GLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

[Close]
BLAST of MELO3C003023.jh1 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 77/161 (47.83%), Postives = 94/161 (58.39%), Query Frame = 0 

Query: 14  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL-------EKFNSSN 73
           DR++ +VCPKPRR+GL+ +     P R      A DL   K G  L       E   +  
Sbjct: 87  DRKDLVVCPKPRRVGLLANNV-IRPLRLHMSQAAADLCDSKAGAELLEIIRRKEDNGTIG 146

Query: 74  TQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------PKLLPLFSTAASPPLSPPPS 133
             L+SSPPYF GSPPSR ANPL QDARF DEK        P L P +S    P  S   S
Sbjct: 147 QLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQP-YSATGFPSPSSSSS 206

Query: 134 AGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 159
           +    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 207 SSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

[Close]
BLAST of MELO3C003023.jh1 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-25
Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 0 

Query: 6   EEMR--SAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDAMDLLFL 65
           EEMR  +A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ +D +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLEKFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPL 125
           KGG G  + + + T + + P +F GSPPSRV+NPL +D+ F +E   LL + S + S P 
Sbjct: 73  KGGGGGGEQDQTRT-VMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPR 132

Query: 126 S---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           +    PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 ATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]
BLAST of MELO3C003023.jh1 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-25
Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 0 

Query: 6   EEMR--SAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDAMDLLFL 65
           EEMR  +A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ +D +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLEKFNSSNTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPL 125
           KGG G  + + + T + + P +F GSPPSRV+NPL +D+ F +E   LL + S + S P 
Sbjct: 73  KGGGGGGEQDQTRT-VMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPR 132

Query: 126 S---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           +    PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 ATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]
BLAST of MELO3C003023.jh1 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-25
Identity = 74/147 (50.34%), Postives = 87/147 (59.18%), Query Frame = 0 

Query: 17  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDAMDLLFLKGGCG-LEKFNSSNTQLASSPP 76
           + +VCPKPRR   +       PFR  F  S A D+   K G   L+ F    +  + SPP
Sbjct: 29  DSVVCPKPRRANNV-----IRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 77  YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSP-PPSAGR-KGGCVRVNFGN 136
           +F GSPPSR ANPL QDARFGDEK           SP LSP  PSA R K GC R+ FG 
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK-------LNTVSPSLSPLLPSASRVKSGCGRMKFGV 148

Query: 137 NPA-VRIEGFDCRLDRERRNRSIPALA 159
            PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 KPATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:
BLAST of MELO3C003023.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465783.14.26e-11499.37PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 P... [more]
XP_004140334.11.95e-11095.57uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical ... [more]
KAA0047427.12.44e-10799.34uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK0... [more]
XP_038906747.12.77e-10390.51uncharacterized protein LOC120092671 [Benincasa hispida][more]
KAG7032498.16.61e-8581.01hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of MELO3C003023.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C003023.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CR462.06e-11499.37uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=... [more]
A0A0A0KRF19.43e-11195.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1[more]
A0A5D3C1471.18e-10799.34Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1E6Z25.29e-8480.12uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A6J1I2X11.07e-8379.75uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460... [more]
BLAST of MELO3C003023.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G68490.11.1e-3047.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G16110.11.8e-2847.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G13390.19.3e-2541.18unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G13390.29.3e-2541.18unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G02555.19.3e-2550.34unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33384EXPRESSED PROTEINcoord: 8..158
NoneNo IPR availablePANTHERPTHR33384:SF18BNAA07G24630D PROTEINcoord: 8..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003023.jh1.t1MELO3C003023.jh1.t1mRNA
MELO3C003023.jh1.t2MELO3C003023.jh1.t2mRNA