MELO3C002913.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C002913.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGlutamic acid-rich protein-like
Locationchr09: 7656244 .. 7656573 (+)
RNA-Seq ExpressionMELO3C002913.jh1
SyntenyMELO3C002913.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGATTCTACGCCCCTTCACTGCCGTTTCACCACGATTTGGCCGTTGCTGCAACACAGATGCCATTACAACTCTTCAAATTCGACAAAATTCCGGCCACCCCACCTCAATTTGTCTCTTATCCAGGGCTCCGGACCAATGGGGTTTCCTGCTTTTGCCATGAAGAGGTTGGGGAAAGGCGACATTGCCCTCACTGAGCCGAGTGATTCCGACGTTGACTTTGATGAATTTTTCGATGCGGATGAGGATAAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGTGCGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGTGTATGA

mRNA sequence

ATGCTCGATTCTACGCCCCTTCACTGCCGTTTCACCACGATTTGGCCGTTGCTGCAACACAGATGCCATTACAACTCTTCAAATTCGACAAAATTCCGGCCACCCCACCTCAATTTGTCTCTTATCCAGGGCTCCGGACCAATGGGGTTTCCTGCTTTTGCCATGAAGAGGTTGGGGAAAGGCGACATTGCCCTCACTGAGCCGAGTGATTCCGACGTTGACTTTGATGAATTTTTCGATGCGGATGAGGATAAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGTGCGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGTGTATGA

Coding sequence (CDS)

ATGCTCGATTCTACGCCCCTTCACTGCCGTTTCACCACGATTTGGCCGTTGCTGCAACACAGATGCCATTACAACTCTTCAAATTCGACAAAATTCCGGCCACCCCACCTCAATTTGTCTCTTATCCAGGGCTCCGGACCAATGGGGTTTCCTGCTTTTGCCATGAAGAGGTTGGGGAAAGGCGACATTGCCCTCACTGAGCCGAGTGATTCCGACGTTGACTTTGATGAATTTTTCGATGCGGATGAGGATAAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGTGCGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGTGTATGA

Protein sequence

MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGKGDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV
Homology
[Close]
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match: TYK05598.1 (hypothetical protein E5676_scaffold98G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (611), Expect = 5.35e-80
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109
           GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV
Sbjct: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109

[Close]
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match: KAA0040555.1 (hypothetical protein E6C27_scaffold262G001220 [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (603), Expect = 8.89e-79
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFR PHLNLSLIQGSGPMGFPAFAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRAPHLNLSLIQGSGPMGFPAFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109
           GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV
Sbjct: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109

[Close]
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match: KAA0040563.1 (glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK05606.1 glutamic acid-rich protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (460), Expect = 4.12e-55
Identity = 88/110 (80.00%), Postives = 91/110 (82.73%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTI PLLQH CHYNSSNSTKFRPPHLNLSLIQGSGPMGFP FAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADED--------------KILLPLKNTREW 96
           G IALT+PSDSD+DFDEFFD DED              +ILLPLKNTREW
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREW 110

[Close]
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match: XP_008465688.1 (PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465689.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465690.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465692.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_016903478.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo])

HSP 1 Score: 181 bits (460), Expect = 5.12e-53
Identity = 88/110 (80.00%), Postives = 91/110 (82.73%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTI PLLQH CHYNSSNSTKFRPPHLNLSLIQGSGPMGFP FAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADED--------------KILLPLKNTREW 96
           G IALT+PSDSD+DFDEFFD DED              +ILLPLKNTREW
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREW 110

[Close]
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match: KAE8648511.1 (hypothetical protein Csa_008404 [Cucumis sativus])

HSP 1 Score: 170 bits (430), Expect = 1.20e-51
Identity = 82/102 (80.39%), Postives = 85/102 (83.33%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDA------DEDKILLPLKNTREW 96
           G IALTEPSDSD+ FDEFFD       DED ILLPLKNT+EW
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 102

[Close]
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C312 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00510 PE=4 SV=1)

HSP 1 Score: 239 bits (611), Expect = 2.59e-80
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109
           GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV
Sbjct: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109

[Close]
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TGK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001220 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 4.31e-79
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFR PHLNLSLIQGSGPMGFPAFAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRAPHLNLSLIQGSGPMGFPAFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109
           GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV
Sbjct: 61  GDIALTEPSDSDVDFDEFFDADEDKILLPLKNTREWCGEASWVWRREGV 109

[Close]
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C5E5 (Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00620 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 2.00e-55
Identity = 88/110 (80.00%), Postives = 91/110 (82.73%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTI PLLQH CHYNSSNSTKFRPPHLNLSLIQGSGPMGFP FAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADED--------------KILLPLKNTREW 96
           G IALT+PSDSD+DFDEFFD DED              +ILLPLKNTREW
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREW 110

[Close]
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CPG6 (uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 2.48e-53
Identity = 88/110 (80.00%), Postives = 91/110 (82.73%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTI PLLQH CHYNSSNSTKFRPPHLNLSLIQGSGPMGFP FAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFDEFFDADED--------------KILLPLKNTREW 96
           G IALT+PSDSD+DFDEFFD DED              +ILLPLKNTREW
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREW 110

[Close]
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488780 PE=4 SV=1)

HSP 1 Score: 170 bits (430), Expect = 2.00e-51
Identity = 82/102 (80.39%), Postives = 85/102 (83.33%), Query Frame = 0 

Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GDIALTEPSDSDVDFDEFFDA------DEDKILLPLKNTREW 96
           G IALTEPSDSD+ FDEFFD       DED ILLPLKNT+EW
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 142

The following BLAST results are available for this feature:
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05598.15.35e-80100.00hypothetical protein E5676_scaffold98G00510 [Cucumis melo var. makuwa][more]
KAA0040555.18.89e-7999.08hypothetical protein E6C27_scaffold262G001220 [Cucumis melo var. makuwa][more]
KAA0040563.14.12e-5580.00glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK05606.1 glutamic ... [more]
XP_008465688.15.12e-5380.00PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465689.1 P... [more]
KAE8648511.11.20e-5180.39hypothetical protein Csa_008404 [Cucumis sativus][more]
BLAST of MELO3C002913.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C3122.59e-80100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TGK54.31e-7999.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C5E52.00e-5580.00Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3CPG62.48e-5380.00uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=... [more]
A0A0A0KS072.00e-5180.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488780 PE=4 SV=1[more]
BLAST of MELO3C002913.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002913.jh1.t1MELO3C002913.jh1.t1mRNA