MELO3C002909 (gene) Melon (DHL92) v4

Overview


Name	MELO3C002909
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Stress response protein NST1-like
Location	chr09: 7320534 .. 7321040 (+)
RNA-Seq Expression	MELO3C002909
Synteny	MELO3C002909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGTCACCCAGCCATGCATAAACCTATCCATCATCAACTTGGATCTTGAACACATTGATTTAAATGTCCCCGTTGTAAACTTATCAGAATGGGAAGCTTCAATAGAGAAGGCGGCAGAGGAGGTAGAGATAGTTGACCCTAATCTTCCATTGATCGTTTATGATCCATTCTTCCAAGACATCCCTATCAAGGAAGATGCAGGTAAGACGAGTTCGAAGGAAGAAGCACAATCAGATGATGAAGCCCCGACGGAGAAGGAAGTTGAGTTCCCCGATGTACTTTACAATGTAATCGTGGAGGTCATGAATGCGGCTTTTAATGAAGTGTTTTTAAAGAATGTGGCAAAGAAGGACCAAATCACCAACCTTAACATTCAAGTGCAAAGCTTAGAAGCCATGGTCTCCAACCTCAACTCCACAGTCGTGCAACTCTCCTTTGCCCTGATCAACTTAACAAGTTTGATGATCGCTCACTCCAACCAATCGTGCCACATTGCGAAGTGA

mRNA sequence

ATGTGTGTCACCCAGCCATGCATAAACCTATCCATCATCAACTTGGATCTTGAACACATTGATTTAAATGTCCCCGTTGTAAACTTATCAGAATGGGAAGCTTCAATAGAGAAGGCGGCAGAGGAGGTAGAGATAGTTGACCCTAATCTTCCATTGATCGTTTATGATCCATTCTTCCAAGACATCCCTATCAAGGAAGATGCAGGTAAGACGAGTTCGAAGGAAGAAGCACAATCAGATGATGAAGCCCCGACGGAGAAGGAAGTTGAGTTCCCCGATGTACTTTACAATGTAATCGTGGAGGTCATGAATGCGGCTTTTAATGAAGTGTTTTTAAAGAATGTGGCAAAGAAGGACCAAATCACCAACCTTAACATTCAAGTGCAAAGCTTAGAAGCCATGGTCTCCAACCTCAACTCCACAGTCGTGCAACTCTCCTTTGCCCTGATCAACTTAACAAGTTTGATGATCGCTCACTCCAACCAATCGTGCCACATTGCGAAGTGA

Coding sequence (CDS)

ATGTGTGTCACCCAGCCATGCATAAACCTATCCATCATCAACTTGGATCTTGAACACATTGATTTAAATGTCCCCGTTGTAAACTTATCAGAATGGGAAGCTTCAATAGAGAAGGCGGCAGAGGAGGTAGAGATAGTTGACCCTAATCTTCCATTGATCGTTTATGATCCATTCTTCCAAGACATCCCTATCAAGGAAGATGCAGGTAAGACGAGTTCGAAGGAAGAAGCACAATCAGATGATGAAGCCCCGACGGAGAAGGAAGTTGAGTTCCCCGATGTACTTTACAATGTAATCGTGGAGGTCATGAATGCGGCTTTTAATGAAGTGTTTTTAAAGAATGTGGCAAAGAAGGACCAAATCACCAACCTTAACATTCAAGTGCAAAGCTTAGAAGCCATGGTCTCCAACCTCAACTCCACAGTCGTGCAACTCTCCTTTGCCCTGATCAACTTAACAAGTTTGATGATCGCTCACTCCAACCAATCGTGCCACATTGCGAAGTGA

Protein sequence

MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK

Homology

[Close]

BLAST of MELO3C002909 vs. NCBI nr
Match: KAA0040567.1 (hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK05610.1 hypothetical protein E5676_scaffold98G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQ 60
           MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQ
Sbjct: 38  MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQ 97

Query: 61  DIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQ 120
           DIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQ
Sbjct: 98  DIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQ 157

Query: 121 ITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK 169
           ITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK
Sbjct: 158 ITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK 205

[Close]

BLAST of MELO3C002909 vs. NCBI nr
Match: TYK05894.1 (hypothetical protein E5676_scaffold1085G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 4.7e-37
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 37  EKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLY 96
           EK AEEVEIVDP LPL VYDP FQDIPI+EDAG+ SSKEEAQ ++EAPTEKEVE  +VL+
Sbjct: 51  EKVAEEVEIVDPELPLTVYDPLFQDIPIEEDAGEKSSKEEAQLEEEAPTEKEVEPRNVLH 110

Query: 97  NVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLM 156
           NVI ++MNAAF EV L+NV  KDQITN   Q+Q LEA VS LNS V QLS AL +LTSLM
Sbjct: 111 NVIAKLMNAAFKEVVLENVTMKDQITNYT-QMQGLEATVSTLNSMVPQLSSALTSLTSLM 170

Query: 157 IAHSNQSCHIAK 169
           IA+SNQS HIA+
Sbjct: 171 IAYSNQSHHIAE 181

[Close]

BLAST of MELO3C002909 vs. NCBI nr
Match: TYJ97037.1 (pol [Cucumis melo var. makuwa])

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-30
Identity = 83/134 (61.94%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 33  EASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFP 92
           + S E+A EEVEIVD  LPL +YD  FQDI +++DAG TSS+EEAQ       EKEVE  
Sbjct: 287 DVSAEEAVEEVEIVDLELPLTIYDSLFQDILVEKDAGDTSSEEEAQ------LEKEVELL 346

Query: 93  DVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTVVQLSFALINL 152
           +VL+NVI++ MN  F E+ L+NV  KDQI +LN QV  LEA VS LNSTVVQLS  L NL
Sbjct: 347 NVLHNVIMDPMNVTFKEMLLENVVMKDQIASLNTQVYGLEATVSTLNSTVVQLSSTLTNL 406

Query: 153 TSLMIAHSNQSCHI 167
           TSLM+AHSNQS HI
Sbjct: 407 TSLMMAHSNQSRHI 414

[Close]

BLAST of MELO3C002909 vs. NCBI nr
Match: TYK06139.1 (hypothetical protein E5676_scaffold572G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 131.0 bits (328), Expect = 9.9e-27
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 9   NLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDA 68
           N+ + NLD EH++LNVP+ NLS+ EA  +KAAE   + +P+LPLIVYDP FQDIP+ +DA
Sbjct: 20  NICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDA 79

Query: 69  GKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQV 128
           G+ SS E AQS+DEA  E E EF ++L+NVI E MN  F EV L NV+ K+QI +LN +V
Sbjct: 80  GEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV 139

[Close]

BLAST of MELO3C002909 vs. NCBI nr
Match: KAA0041154.1 (hypothetical protein E6C27_scaffold128G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-23
Identity = 67/111 (60.36%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 32  WEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEF 91
           WE S EKA E+  IVD +L L +YDP FQDI ++EDAG+TS +EEAQ DDEA   KEVEF
Sbjct: 30  WEVSTEKAIEDEAIVDLDLSLTIYDPLFQDILVEEDAGETSFEEEAQPDDEALAAKEVEF 89

Query: 92  PDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTV 143
            DVL+NVI   M     E  L+N+  KDQI +LN QVQ LEA VSNLNS V
Sbjct: 90  YDVLHNVIAGHMYTTSKEALLENMVMKDQIASLNTQVQGLEATVSNLNSMV 140

[Close]

BLAST of MELO3C002909 vs. ExPASy TrEMBL
Match: A0A5D3C2N8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00660 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQ 60
           MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQ
Sbjct: 38  MCVTQPCINLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQ 97

Query: 61  DIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQ 120
           DIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQ
Sbjct: 98  DIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQ 157

Query: 121 ITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK 169
           ITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK
Sbjct: 158 ITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLMIAHSNQSCHIAK 205

[Close]

BLAST of MELO3C002909 vs. ExPASy TrEMBL
Match: A0A5D3C3K8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1085G00020 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 37  EKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFPDVLY 96
           EK AEEVEIVDP LPL VYDP FQDIPI+EDAG+ SSKEEAQ ++EAPTEKEVE  +VL+
Sbjct: 51  EKVAEEVEIVDPELPLTVYDPLFQDIPIEEDAGEKSSKEEAQLEEEAPTEKEVEPRNVLH 110

Query: 97  NVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTVVQLSFALINLTSLM 156
           NVI ++MNAAF EV L+NV  KDQITN   Q+Q LEA VS LNS V QLS AL +LTSLM
Sbjct: 111 NVIAKLMNAAFKEVVLENVTMKDQITNYT-QMQGLEATVSTLNSMVPQLSSALTSLTSLM 170

Query: 157 IAHSNQSCHIAK 169
           IA+SNQS HIA+
Sbjct: 171 IAYSNQSHHIAE 181

[Close]

BLAST of MELO3C002909 vs. ExPASy TrEMBL
Match: A0A5D3BD35 (Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00990 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 83/134 (61.94%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 33  EASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEFP 92
           + S E+A EEVEIVD  LPL +YD  FQDI +++DAG TSS+EEAQ       EKEVE  
Sbjct: 287 DVSAEEAVEEVEIVDLELPLTIYDSLFQDILVEKDAGDTSSEEEAQ------LEKEVELL 346

Query: 93  DVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTVVQLSFALINL 152
           +VL+NVI++ MN  F E+ L+NV  KDQI +LN QV  LEA VS LNSTVVQLS  L NL
Sbjct: 347 NVLHNVIMDPMNVTFKEMLLENVVMKDQIASLNTQVYGLEATVSTLNSTVVQLSSTLTNL 406

Query: 153 TSLMIAHSNQSCHI 167
           TSLM+AHSNQS HI
Sbjct: 407 TSLMMAHSNQSRHI 414

[Close]

BLAST of MELO3C002909 vs. ExPASy TrEMBL
Match: A0A5D3C6Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00350 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.8e-27
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 9   NLSIINLDLEHIDLNVPVVNLSEWEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDA 68
           N+ + NLD EH++LNVP+ NLS+ EA  +KAAE   + +P+LPLIVYDP FQDIP+ +DA
Sbjct: 20  NICVANLDYEHLNLNVPIANLSKREAEQKKAAENAVLFNPDLPLIVYDPLFQDIPMSKDA 79

Query: 69  GKTSSKEEAQSDDEAPTEKEVEFPDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQV 128
           G+ SS E AQS+DEA  E E EF ++L+NVI E MN  F EV L NV+ K+QI +LN +V
Sbjct: 80  GEISSVEGAQSEDEALAENEGEFHELLHNVIAEPMNTVFKEVLLDNVSMKEQIASLNTKV 139

[Close]

BLAST of MELO3C002909 vs. ExPASy TrEMBL
Match: A0A5A7TCG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00750 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 67/111 (60.36%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 32  WEASIEKAAEEVEIVDPNLPLIVYDPFFQDIPIKEDAGKTSSKEEAQSDDEAPTEKEVEF 91
           WE S EKA E+  IVD +L L +YDP FQDI ++EDAG+TS +EEAQ DDEA   KEVEF
Sbjct: 30  WEVSTEKAIEDEAIVDLDLSLTIYDPLFQDILVEEDAGETSFEEEAQPDDEALAAKEVEF 89

Query: 92  PDVLYNVIVEVMNAAFNEVFLKNVAKKDQITNLNIQVQSLEAMVSNLNSTV 143
            DVL+NVI   M     E  L+N+  KDQI +LN QVQ LEA VSNLNS V
Sbjct: 90  YDVLHNVIAGHMYTTSKEALLENMVMKDQIASLNTQVQGLEATVSNLNSMV 140

The following BLAST results are available for this feature:

BLAST of MELO3C002909 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040567.1	2.6e-83	100.00	hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa] >TYK056...	[more]
TYK05894.1	4.7e-37	71.97	hypothetical protein E5676_scaffold1085G00020 [Cucumis melo var. makuwa]	[more]
TYJ97037.1	4.3e-30	61.94	pol [Cucumis melo var. makuwa]	[more]
TYK06139.1	9.9e-27	56.67	hypothetical protein E5676_scaffold572G00350 [Cucumis melo var. makuwa]	[more]
KAA0041154.1	3.9e-23	60.36	hypothetical protein E6C27_scaffold128G00750 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C002909 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C002909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2N8	1.2e-83	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C3K8	2.3e-37	71.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BD35	2.1e-30	61.94	Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00990 PE=4 SV=1	[more]
A0A5D3C6Y4	4.8e-27	56.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TCG4	1.9e-23	60.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C002909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002909.1	MELO3C002909.1	mRNA