MELO3C002857 (gene) Melon (DHL92) v4

Overview
NameMELO3C002857
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 18088448 .. 18088687 (-)
RNA-Seq ExpressionMELO3C002857
SyntenyMELO3C002857
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGAAAGGCTTCCATGGTGGTCAAGGCATTGAGGAGGAAGACATTGACGTTGGAGTGGTGGCTTGTTGCAGTTGTGCGTCGAAGCGGCTAGGAGACGGTAGTGCTAAGTTCAATTGTTTGGAGACGGTACTATTTGCTGCTAACGTTGGATGGACCGCAGGCGTTGGAGTGGCTGGGAGACGCAACGACGATGAAGAGAAGCAACACAAAACTTTCAACACGAACAAAGGGTGA

mRNA sequence

ATGGAGAAGAAAGGCTTCCATGGTGGTCAAGGCATTGAGGAGGAAGACATTGACGTTGGAGTGGTGGCTTGTTGCAGTTGTGCGTCGAAGCGGCTAGGAGACGGTAGTGCTAAGTTCAATTGTTTGGAGACGGTACTATTTGCTGCTAACGTTGGATGGACCGCAGGCGTTGGAGTGGCTGGGAGACGCAACGACGATGAAGAGAAGCAACACAAAACTTTCAACACGAACAAAGGGTGA

Coding sequence (CDS)

ATGGAGAAGAAAGGCTTCCATGGTGGTCAAGGCATTGAGGAGGAAGACATTGACGTTGGAGTGGTGGCTTGTTGCAGTTGTGCGTCGAAGCGGCTAGGAGACGGTAGTGCTAAGTTCAATTGTTTGGAGACGGTACTATTTGCTGCTAACGTTGGATGGACCGCAGGCGTTGGAGTGGCTGGGAGACGCAACGACGATGAAGAGAAGCAACACAAAACTTTCAACACGAACAAAGGGTGA

Protein sequence

MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVAGRRNDDEEKQHKTFNTNKG
Homology
[Close]
BLAST of MELO3C002857 vs. NCBI nr
Match: KAA0047089.1 (uncharacterized protein E6C27_scaffold466G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 169.1 bits (427), Expect = 1.5e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVA 60
          MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVA
Sbjct: 1  MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVA 60

Query: 61 GRRNDDEEKQHKTFNTNKG 80
          GRRNDDEEKQHKTFNTNKG
Sbjct: 61 GRRNDDEEKQHKTFNTNKG 79

[Close]
BLAST of MELO3C002857 vs. ExPASy TrEMBL
Match: A0A5A7U0T1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00560 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.5e-39
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVA 60
          MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVA
Sbjct: 1  MEKKGFHGGQGIEEEDIDVGVVACCSCASKRLGDGSAKFNCLETVLFAANVGWTAGVGVA 60

Query: 61 GRRNDDEEKQHKTFNTNKG 80
          GRRNDDEEKQHKTFNTNKG
Sbjct: 61 GRRNDDEEKQHKTFNTNKG 79

The following BLAST results are available for this feature:
BLAST of MELO3C002857 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C002857 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047089.11.5e-38100.00uncharacterized protein E6C27_scaffold466G00560 [Cucumis melo var. makuwa][more]
BLAST of MELO3C002857 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U0T17.5e-39100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C002857 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002857.1MELO3C002857.1mRNA