MELO3C002763 (gene) Melon (DHL92) v4

Overview
NameMELO3C002763
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Locationchr12: 19767311 .. 19767980 (-)
RNA-Seq ExpressionMELO3C002763
SyntenyMELO3C002763
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAACCAAAAATCCTCTTCCACAAAAACAGAAATCATATCACCTTCTTCGTAATCCCCTTCGTTTTTTCTTCATTCAAAATTCCAAACCTTAAATTTCATTTTTTAAAAATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCTCCTCAATTCGTCTCCGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAATCCCTAGCTTCCTCTTCCTCCTTCAAGATCGACAAATTCTCTGTTTCTTCCCCGCCATCTCCTGCTTCTTCCGCCGCCGCCGCCGCCGTTAATTCCAAATACTTTCTCGATCAGGTCCCTGTTCCCCTGGGGCCTTTCTCCATTTTCGAACATTGAGAAATGGATTCTTAGTTTCGATGACACTCAGAATCCGTTTTTTCTTCTTTCTTTTTTTTACCCTTTTTTGCGCCGACCGGGTAGGATTCATTCTGGCCGGAAATGGCGTTGTAGATATCAAGTCGACGGCGCAGTGGCTGCCGCCGGTTAAGAGATGGGTTTTCTTTTTTTCTTTTTTCTTTTTTTGTCTTTTTTTATGGGGTTATTTAGTGAATTTCCGAATGCGTTTGTAAGGTGTGAGTTCGATCTTTATATGAAATGAAAAACTGCGTTGCTCTTCG

mRNA sequence

CACAACCAAAAATCCTCTTCCACAAAAACAGAAATCATATCACCTTCTTCGTAATCCCCTTCGTTTTTTCTTCATTCAAAATTCCAAACCTTAAATTTCATTTTTTAAAAATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCTCCTCAATTCGTCTCCGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAATCCCTAGCTTCCTCTTCCTCCTTCAAGATCGACAAATTCTCTGTTTCTTCCCCGCCATCTCCTGCTTCTTCCGCCGCCGCCGCCGCCGTTAATTCCAAATACTTTCTCGATCAGGTCCCTGTTCCCCTGGGGCCTTTCTCCATTTTCGAACATTGAGAAATGGATTCTTAGTTTCGATGACACTCAGAATCCGTTTTTTCTTCTTTCTTTTTTTTACCCTTTTTTGCGCCGACCGGGTAGGATTCATTCTGGCCGGAAATGGCGTTGTAGATATCAAGTCGACGGCGCAGTGGCTGCCGCCGGTTAAGAGATGGGTTTTCTTTTTTTCTTTTTTCTTTTTTTGTCTTTTTTTATGGGGTTATTTAGTGAATTTCCGAATGCGTTTGTAAGGTGTGAGTTCGATCTTTATATGAAATGAAAAACTGCGTTGCTCTTCG

Coding sequence (CDS)

CAACCAAAAATCCTCTTCCACAAAAACAGAAATCATATCACCTTCTTCGTAATCCCCTTCGTTTTTTCTTCATTCAAAATTCCAAACCTTAAATTTCATTTTTTAAAAATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCTCCTCAATTCGTCTCCGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAATCCCTAGCTTCCTCTTCCTCCTTCAAGATCGACAAATTCTCTGTTTCTTCCCCGCCATCTCCTGCTTCTTCCGCCGCCGCCGCCGCCGTTAATTCCAAATACTTTCTCGATCAGGTCCCTGTTCCCCTGGGGCCTTTCTCCATTTTCGAACATTGA

Protein sequence

QPKILFHKNRNHITFFVIPFVFSSFKIPNLKFHFLKMAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPPSPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH
Homology
BLAST of MELO3C002763 vs. NCBI nr
Match: KAA0054015.1 (hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK20701.1 hypothetical protein E5676_scaffold480G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 175.6 bits (444), Expect = 2.7e-40
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 96
           MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP
Sbjct: 1   MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 60

Query: 97  SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 129
           SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH
Sbjct: 61  SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 92

BLAST of MELO3C002763 vs. NCBI nr
Match: KGN65872.1 (hypothetical protein Csa_023250 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 96
           MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEEDQRE+L SSSSFKIDKFSV SPP
Sbjct: 1   MAATSRLARFISEACPPQFVSVMRRRSPRVLDTINEEDQREALVSSSSFKIDKFSVPSPP 60

Query: 97  SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 129
           SP SS  AAA+NSKYFLDQVPVPLGPFSIFEH
Sbjct: 61  SPDSS--AAAINSKYFLDQVPVPLGPFSIFEH 90

BLAST of MELO3C002763 vs. NCBI nr
Match: KAG7019500.1 (hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.7 bits (304), Expect = 4.6e-24
Identity = 69/88 (78.41%), Postives = 74/88 (84.09%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 96
           MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L+SSSS KIDKFSVSS P
Sbjct: 1   MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLP 60

Query: 97  -----SPASSAAAAAVNSKYFLDQVPVP 120
                SP S A +AAV+SKYFL+Q   P
Sbjct: 61  STMAASPPSPATSAAVSSKYFLNQFQWP 88

BLAST of MELO3C002763 vs. NCBI nr
Match: KAG6583880.1 (hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVS--- 96
           MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEED RE+L+SSSS KIDKFSVS   
Sbjct: 1   MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLP 60

Query: 97  -----SPPSPASSAA 104
                SPPSPA+SAA
Sbjct: 61  STMAASPPSPATSAA 75

BLAST of MELO3C002763 vs. NCBI nr
Match: PQP93653.1 (hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-13
Identity = 55/89 (61.80%), Postives = 61/89 (68.54%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------RESLASSSSFKIDKF 96
           M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       +SL SSSSFK    
Sbjct: 1   MMANSRLARFITEVAPPQFVSVMRHRTSKVLDTINEEEREYANTSNDSLISSSSFKGCAC 60

Query: 97  SVSSPP---SPASSAAAAAVNSKYFLDQV 117
           S SSPP   S AS AAAA   SKYFL +V
Sbjct: 61  STSSPPSFASAASGAAAAGTESKYFLKEV 89

BLAST of MELO3C002763 vs. ExPASy TrEMBL
Match: A0A5A7UJX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00970 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 96
           MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP
Sbjct: 1   MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 60

Query: 97  SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 129
           SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH
Sbjct: 61  SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 92

BLAST of MELO3C002763 vs. ExPASy TrEMBL
Match: A0A0A0LYE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 9.6e-36
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSSSFKIDKFSVSSPP 96
           MAATSRLARFISEACPPQFVSVMRRRSP+VLDTINEEDQRE+L SSSSFKIDKFSV SPP
Sbjct: 1   MAATSRLARFISEACPPQFVSVMRRRSPRVLDTINEEDQREALVSSSSFKIDKFSVPSPP 60

Query: 97  SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 129
           SP SS  AAA+NSKYFLDQVPVPLGPFSIFEH
Sbjct: 61  SPDSS--AAAINSKYFLDQVPVPLGPFSIFEH 90

BLAST of MELO3C002763 vs. ExPASy TrEMBL
Match: A0A314XQS6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10926 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 55/89 (61.80%), Postives = 61/89 (68.54%), Query Frame = 0

Query: 37  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------RESLASSSSFKIDKF 96
           M A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       +SL SSSSFK    
Sbjct: 1   MMANSRLARFITEVAPPQFVSVMRHRTSKVLDTINEEEREYANTSNDSLISSSSFKGCAC 60

Query: 97  SVSSPP---SPASSAAAAAVNSKYFLDQV 117
           S SSPP   S AS AAAA   SKYFL +V
Sbjct: 61  STSSPPSFASAASGAAAAGTESKYFLKEV 89

BLAST of MELO3C002763 vs. ExPASy TrEMBL
Match: A0A6J5WYZ3 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25601 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-13
Identity = 55/96 (57.29%), Postives = 64/96 (66.67%), Query Frame = 0

Query: 39  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQR------ESLASSSSFKIDKFSV 98
           A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       +SL SSS  K    S 
Sbjct: 2   ANSRLARFITEVAPPQFVSVMRHRTSKVLDTINEEEREYANTSYDSLISSSPSKGCACST 61

Query: 99  SSPPSPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 129
           SSPPS AS +AAA  +SKYFL +V      FS+F H
Sbjct: 62  SSPPSFASGSAAAGTDSKYFLKEVH---RAFSMFGH 94

BLAST of MELO3C002763 vs. ExPASy TrEMBL
Match: A0A5E4FYK5 (PREDICTED: galactosyltransferase family OS=Prunus dulcis OX=3755 GN=ALMOND_2B011231 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12
Identity = 55/99 (55.56%), Postives = 63/99 (63.64%), Query Frame = 0

Query: 39  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQ------RESLASSSSFKIDKFSV 98
           A SRLARFI+E  PPQFVSVMR R+ KVLDTINEE++       +SL SSSS K    S 
Sbjct: 2   ANSRLARFITEVAPPQFVSVMRHRTSKVLDTINEEEREYANTSNDSLISSSSSKGCACST 61

Query: 99  SSPP---SPASSAAAAAVNSKYFLDQVPVPLGPFSIFEH 129
            SPP   S AS AAAA   S+YFL +V      FS+F H
Sbjct: 62  PSPPSFASAASGAAAAGTESRYFLKEVH---RAFSMFGH 97

BLAST of MELO3C002763 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 0

Query: 39  ATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLAS--SSSFKIDKFS--VSS 98
           ATSRLARFI+E  PPQFV+VMRRR+ KVLDTI EE++     S   SSF   K S   +S
Sbjct: 2   ATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEEREVGTDSIFPSSFNSKKISSPFTS 61

Query: 99  PPSPASSAAAAAVNSKYFLDQVPVP--LGPFSIFEH 129
           P S + S+A+A+ +    L++ PV    G F +F++
Sbjct: 62  PYSSSVSSASASASCTSGLNKFPVTENRGSFPVFKN 97

BLAST of MELO3C002763 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein )

HSP 1 Score: 50.8 bits (120), Expect = 9.2e-07
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 39 ATSRLARFISEACPPQFVSVMRRR--SPKVLDTINEEDQRE 78
          ATSRLARF+SE  PPQFV+VMRR   + + LDTI EE+ +E
Sbjct: 2  ATSRLARFVSEVAPPQFVTVMRRHRAAKQKLDTIKEEENKE 42

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0054015.12.7e-40100.00hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK2070... [more]
KGN65872.12.0e-3591.30hypothetical protein Csa_023250 [Cucumis sativus][more]
KAG7019500.14.6e-2478.41hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6583880.11.4e-2082.67hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sorori... [more]
PQP93653.12.8e-1361.80hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora][more]
Match NameE-valueIdentityDescription
A0A5A7UJX71.3e-40100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LYE69.6e-3691.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1[more]
A0A314XQS61.3e-1361.80Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_109... [more]
A0A6J5WYZ33.9e-1357.29Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25601 PE=4 S... [more]
A0A5E4FYK59.7e-1255.56PREDICTED: galactosyltransferase family OS=Prunus dulcis OX=3755 GN=ALMOND_2B011... [more]
Match NameE-valueIdentityDescription
AT1G30260.11.6e-1147.92BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein... [more]
AT4G21060.19.2e-0763.41Galactosyltransferase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35101OS02G0162600 PROTEINcoord: 36..118
NoneNo IPR availablePANTHERPTHR35101:SF12OS02G0162600 PROTEINcoord: 36..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002763.1MELO3C002763.1mRNA