MELO3C002712.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002712.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Coatomer subunit zeta
Location	chr12: 21480845 .. 21484958 (+)
RNA-Seq Expression	MELO3C002712.jh1
Synteny	MELO3C002712.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTATGGAAAAGTAAGGGCCTGGTTTTAAATTTTAGTTAACTTTGGGGACCGGCCGGAGTCGACGAAGTATTTGGACAGAGTCTCCTTTTTTCGATTTTCGTTCTCTTGCCTTCAATAACGCGAGAGAGATCCGACGGCGTTCGAATTCCCGAAGAATATTTTCCCGGGAAATTTTTTCACAAATCAAATGGTCAGTTTAGTTCTTCTTTTTCAACTGATGATTTCTTCGTTCCTTACTTCAATTACTTATTCGTCGGATTCAGCATTTAGACTTGTTTTCCAGTAACTACCTGTGGATTTTCGGTGATGAACATTGATATTAGGATTATGGAGTTGTTAGTTATGTTCGAAATTTTTTGACATTTAATTGGTTAATGCCTTAGTAGATCTGAGTCCTGAGCTCATTTTAGCAATGTTTTCGTAAGCACAGATCGATCTCTGAACTTACTAAGTTGATTCGGATTTTGTTAATTTCTTCGGAAGATTTGGATTGCATTTTATTTCGATTCAAGACTTAAGTGCAAATGCTTGAAGCAGGTAGGAAGATCTTCATTACTTCCTTCGTGTGGAGTTTGTGATTTGTCTACGAATCTAGCCGATGACTTGAAGATTTTTTTATCTTTCGTATAGACAAATTTTAAGTTAAAAATAATCGCACGTGATGAGATTTTTCTTCTCAGTTCATTTTATTTCGATTCGAGACTTTAGTGGAAATGCTTGAAGCTGGTAGGAAGATCTTGATTTTTATAGCATCTGCTCTATAAGAATCTATGTGAAACTTTTTCAGTAGGCTACTTAATTTAGAATTTTGATTTAGCTTAATCTGCTAGTTTCTGAATGTGCTTCTGTCTTAGCTCTGTATGTTTCTCAGACAAGATTGCTGTGACCACAATTATATAGGGAAAAAACCATGCGGTTCACCAAAAACATGTTTACTTTATTATATGCAGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTACAAAGGAAGCTTTTGAGAAAGCCGTTTTCATCAAAACTCAGAAGACTAATGCTCGAACAGAGGGTAGATACCTTTTCATATATTGGGTTTTAACTGTTTTTTTGTGAAAATATGCATCCTTAATCCTGTTAGCTACTCCTATTTAAGTCAATTTCAATGTCCTTTTACCACTGTAAAGAAATTTTTGAATCTTTCAGTAGTCAAATTATTAGTTGGTTTATCCATGATCGTTGTCTTTTGCCATGAGACTAAGAATTATTTTTTCAATCACATTCTCGTGACTATCAGTAGCTGGGTTAGTCATTATCTATTTTGATCTCTGCATTCTTCTATTGGACCATCTCCCAGTCTAACACTATATTGTTTAATTCAACACTTGTTTCTTTTTGCCTTACATGGTCAGTGAGTTTCTTTTCTACGTTCTAACATTCAATTCACTTTAACAGCGGAGATAGCAATGTTTGAGAACAATATAGTGGTTTACAAGTTTGCTCAAGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTCGATGCTGTGGGCATTCTTCTTAGGTCTTGACACTATTTATATATTAATTTTGGATCCTTATGCACTGGCTCGATATTAGTGTTCTCAGTCTTAGTATTGTTAGATATTTATTTTTGTTTCTTGTATTCCAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTTGATGAAATTATTGACGGAGGGTATGTCTCATATGCTGTCCTTATTACCCATTCTCTGCATTTCAATTGTGTGACTTGTTTTTCCATTTCCTTTTATTGATATTCGTTATTCTGTATCTTGATTGTGTCACTCTTTTTACTTACCCTCTTTAAGTTGATGTCTATGTCCATTATTGCTAGACAAATTGTGAACATGAAAATCGAGTATGAGTTGTGGATGATTATATATCAAGAATTCAAGGTTGTAGCAGTGTCATTACTCGTGAGAAAGTAGTTGTAGTTTCATGAATTTATGTGGAAAATAAGTTGTTGATTAATGAGTAATAAGATTTCATTGTAGTTGCATAATTCCTAAAGAATAGTCTAATAAGTTATTCTCTCCTGTTGAAGTACTGGCTATTTTTTAGTTTGTGGATTGTTGCTCGATAACAGATTTGGCTGCCCCACATCTTCATTTCGATATGTCACTATTGTTTACATAAATTGATGGACACGCTACATCCGATTATGTTGATAGTGGAGATGACATTATGTAACGTGAGGCATAAATTTGAAGAAGCTAGAACCGTAGAGCATTGCTATAATCTGTTTTTGATGGAAAGACTACAAACCATTTAAATTTGATTGATTTATTTTCTCAAGATTGTTCAGAAATAAATTTCTTCTCATCTGAATATTCAAGTTTGATGTTTTCATTGCCTCGCGTGTAGAATTATTGTCATTATGCTTTTGTGAAATTGCAATTTAACAGTTCTTAACCTTTTCATATACCATCTTGGCATCATGGAGCTTTAGCTATTTAACTGTTTGTGTATTTTTCAGCATTATTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGATAGTAATGCTCCTCTGTCTGAGCAGGTACAGTACAATATTTCACATTCTTATAGCTTGTTTTGTTTGGTTGGCAATATGAATTATATTTTATGTTGTCGGTTCATGAGTTCAATAAATATGTTTGATAGACCATCTAAATTCTGAACACATCTTTCAATGCACCTAAATTTAGAATTTTAGAATTTTAAATTGCCAAATTACATTTTAAAAAAATAATTAGGAATATAGTATTTCACATTATAAACTCAGTTCTAGTCATTCAAGTTTTTCAAGTATAGAACAATATTATAAATTAATTAATGATAGTTTATATTCAACAAAATATTTGTTGGTTGATTTTATGGTTTAAATATATATATATATATATATATAAATATATTATCAAACACGTTAAAAATAATTTCTAAACCTACGACCAAGAACATATCGGAAAACATATGACGTGCAGCTATGAACCCTATTTTTATTGAATCTCCTAATTTTGATTTTTTGTTTTATCAAGCATGCCTTTTATCTTTTTACTTTTTCTCCCTTTCGTTTTCCAGTATTTTGAAAGATGTTTTTATCTCTCTCTTCAGACAATAAGTCAAGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTCAAGTAATATGTTCTATTGATACAAGTGAGTGGCAAGAACTATCCCCCACACCAAAAGAAAAAAAAAAAAACTGTGAGAAAAAAAAAAGAAAAGAAAAATTCTGGTCGAGTTGGGGTGCTGTTTTTGGTAAGAGATTGATTGATGTTTGAGTTATCAATAGCAGCCTCATCTCATGTTTGTATATTCAGCTCATAACCATGCTGCCTTTGCCTTTTGGTAAAACCTGATTTTGGATCTGAGCAGATGTGGTTCGTTGCGGGACTGGTGCTAAGTGTTATTATTTGTGCCTGTGGAGTTGCAAACTATGTTTTCTTTTTAGGACATTGGATTTTTGTGGTCATTAGTTAAAGAAAAACTATTTTAGATAACAATACTACGAAAATATCTACAAAATATAGTAAAATATCATAATCTATTTGTTGGTAAACCACAATAGATTACTATTTGCATCTGTAAGTAGTTTGTGATATTTTACTGTATTTTGCTATATTTGAAAATAGTCAATGGCTAAATGAGGACCTAGGAAGCTATTTTGACTGATTTCTTGGATAGAACTTTGGGATTTTTGCTTGGATGAACATAGGTTGAGTTCAAATGTGATTAAGAATGCACTGCTTGTAAAATGGGTATGTTCTTGCAAATTGGCGTGCATTTTAACTATTTAAGAATTAGGAAATGGTTTTTTTAGAAGGAAAATTAGTGTTGTTAAATGGTCTACTTGGGTAGTTAGTGAATAAGGCACCGATTCTCATTATACATTTACAATTAATAAAAGAAGCTGAAGTTATAAA

mRNA sequence

AGTTATGGAAAAGTAAGGGCCTGGTTTTAAATTTTAGTTAACTTTGGGGACCGGCCGGAGTCGACGAAGTATTTGGACAGAGTCTCCTTTTTTCGATTTTCGTTCTCTTGCCTTCAATAACGCGAGAGAGATCCGACGGCGTTCGAATTCCCGAAGAATATTTTCCCGGGAAATTTTTTCACAAATCAAATGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTACAAAGGAAGCTTTTGAGAAAGCCGTTTTCATCAAAACTCAGAAGACTAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAGAACAATATAGTGGTTTACAAGTTTGCTCAAGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTCGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTTGATGAAATTATTGACGGAGGCATTATTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGATAGTAATGCTCCTCTGTCTGAGCAGACAATAAGTCAAGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTCAAGTAATATGTTCTATTGATACAAGTGAGTGGCAAGAACTATCCCCCACACCAAAAGAAAAAAAAAAAAACTGTGAGAAAAAAAAAAGAAAAGAAAAATTCTGGTCGAGTTGGGGTGCTGTTTTTGGTAAGAGATTGATTGATGTTTGAGTTATCAATAGCAGCCTCATCTCATGTTTGTATATTCAGCTCATAACCATGCTGCCTTTGCCTTTTGGTAAAACCTGATTTTGGATCTGAGCAGATGTGGTTCGTTGCGGGACTGGTGCTAAGTGTTATTATTTGTGCCTGTGGAGTTGCAAACTATGTTTTCTTTTTAGGACATTGGATTTTTGTGGTCATTAGTTAAAGAAAAACTATTTTAGATAACAATACTACGAAAATATCTACAAAATATAGTAAAATATCATAATCTATTTGTTGGTAAACCACAATAGATTACTATTTGCATCTGTAAGTAGTTTGTGATATTTTACTGTATTTTGCTATATTTGAAAATAGTCAATGGCTAAATGAGGACCTAGGAAGCTATTTTGACTGATTTCTTGGATAGAACTTTGGGATTTTTGCTTGGATGAACATAGGTTGAGTTCAAATGTGATTAAGAATGCACTGCTTGTAAAATGGGTATGTTCTTGCAAATTGGCGTGCATTTTAACTATTTAAGAATTAGGAAATGGTTTTTTTAGAAGGAAAATTAGTGTTGTTAAATGGTCTACTTGGGTAGTTAGTGAATAAGGCACCGATTCTCATTATACATTTACAATTAATAAAAGAAGCTGAAGTTATAAA

Coding sequence (CDS)

ATGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTACAAAGGAAGCTTTTGAGAAAGCCGTTTTCATCAAAACTCAGAAGACTAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAGAACAATATAGTGGTTTACAAGTTTGCTCAAGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTCGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTTGATGAAATTATTGACGGAGGCATTATTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGATAGTAATGCTCCTCTGTCTGAGCAGACAATAAGTCAAGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTCAAGTAA

Protein sequence

MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK

Homology

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BLAST of MELO3C002712.jh1 vs. NCBI nr
Match: XP_008443986.1 (PREDICTED: coatomer subunit zeta-1-like [Cucumis melo])

HSP 1 Score: 338 bits (868), Expect = 5.60e-117
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. NCBI nr
Match: KAA0057104.1 (coatomer subunit zeta-1-like [Cucumis melo var. makuwa] >TYK20639.1 coatomer subunit zeta-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 337 bits (863), Expect = 3.35e-116
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE
Sbjct: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 62

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 63  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 123 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MELO3C002712.jh1 vs. NCBI nr
Match: XP_038895636.1 (coatomer subunit zeta-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 334 bits (857), Expect = 2.66e-115
Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. NCBI nr
Match: XP_038895635.1 (coatomer subunit zeta-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 332 bits (852), Expect = 1.59e-114
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAMFE
Sbjct: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 63  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           CLDEIIDGGIILETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 123 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MELO3C002712.jh1 vs. NCBI nr
Match: XP_022954697.1 (coatomer subunit zeta-2-like isoform X2 [Cucurbita moschata] >XP_022994906.1 coatomer subunit zeta-2-like isoform X2 [Cucurbita maxima] >KAG6573351.1 Coatomer subunit zeta-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012515.1 Coatomer subunit zeta-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (851), Expect = 2.19e-114
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVF KTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.1e-74
Identity = 142/177 (80.23%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           ME  P +KNILLLDSEGKRVAVKYYSDDWPTNS +EAFEK+VF KTQKTNARTE E+   
Sbjct: 1   MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTAL 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI 
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           L  DEIIDGGI+LETDANVIAGK   +S D NAPLSEQTISQALATAREHL RSL+K
Sbjct: 121 LSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.1e-74
Identity = 139/176 (78.98%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           ESCPS+KNILLLDSEGKRVAVKY+SDDW +N++K AFEK+VF KT KTNAR+EAEI +F+
Sbjct: 7   ESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLFD 66

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
             IVVYKF QDLHFFVT G+DENELI+A+VLQGF D+VG+LLRG+VEK+ ALENLDLILL
Sbjct: 67  GYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILL 126

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           C+DEI+DGGIILETDAN IAGKVA++++D +AP SEQTISQALATAREHLARSLLK
Sbjct: 127 CIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-72
Identity = 137/175 (78.29%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           +SCP +KNILLLDSEGKRVAVKYYSDDWPTN+ K +FEK VF KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NI+VYKFAQDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETD NVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-72
Identity = 138/175 (78.86%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           +SCP +KNILLLDSEGKRVAVKYYSDDW TN++K AFEK VF KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NIVVYKFAQDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETDANVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-69
Identity = 133/176 (75.57%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPS+KNILLLDSEGKRVAVKYY+DDWPT S K AFEK+VF+KTQK  A  EAEI MF
Sbjct: 1   MESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           + +IVVYKF QDLHFFVTGGE+ENELILASVLQGF DAV I+LR NV+K+ ALENLDLIL
Sbjct: 61  DGHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 177
           LCLDEI+DGGI+LET+ +VIA KV++H I+    L+EQTI QAL TAREHL +SLL
Sbjct: 121 LCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B9E0 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103487438 PE=3 SV=1)

HSP 1 Score: 338 bits (868), Expect = 2.71e-117
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DB03 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00210 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 1.62e-116
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE
Sbjct: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 62

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 63  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 123 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K0K6 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.06e-114
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVF KTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GRN0 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.06e-114
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVF KTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EPA3 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1)

HSP 1 Score: 330 bits (847), Expect = 4.31e-114
Identity = 173/177 (97.74%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVGILLR NVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRSNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MELO3C002712.jh1 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein )

HSP 1 Score: 279.3 bits (713), Expect = 2.2e-75
Identity = 142/177 (80.23%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMF 60
           ME  P +KNILLLDSEGKRVAVKYYSDDWPTNS +EAFEK+VF KTQKTNARTE E+   
Sbjct: 1   MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTAL 60

Query: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI 
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           L  DEIIDGGI+LETDANVIAGK   +S D NAPLSEQTISQALATAREHL RSL+K
Sbjct: 121 LSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of MELO3C002712.jh1 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-73
Identity = 138/175 (78.86%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           +SCP +KNILLLDSEGKRVAVKYYSDDW TN++K AFEK VF KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NIVVYKFAQDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETDANVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of MELO3C002712.jh1 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 4.6e-73
Identity = 136/175 (77.71%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61
           +SCP +K ILLLDSEGKRVAVKYYSDDWPTN+ K +FEK VF KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKKILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NI+VYKFAQDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETD NVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

The following BLAST results are available for this feature:

BLAST of MELO3C002712.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443986.1	5.60e-117	100.00	PREDICTED: coatomer subunit zeta-1-like [Cucumis melo]	[more]
KAA0057104.1	3.35e-116	100.00	coatomer subunit zeta-1-like [Cucumis melo var. makuwa] >TYK20639.1 coatomer sub...	[more]
XP_038895636.1	2.66e-115	98.87	coatomer subunit zeta-1-like isoform X2 [Benincasa hispida]	[more]
XP_038895635.1	1.59e-114	98.86	coatomer subunit zeta-2-like isoform X1 [Benincasa hispida]	[more]
XP_022954697.1	2.19e-114	97.74	coatomer subunit zeta-2-like isoform X2 [Cucurbita moschata] >XP_022994906.1 coa...	[more]

BLAST of MELO3C002712.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940S5	3.1e-74	80.23	Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1	[more]
Q6Z844	3.1e-74	78.98	Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 S...	[more]
Q84LG4	1.3e-72	78.29	Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1	[more]
Q8H1F4	1.7e-72	78.86	Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1	[more]
Q9MAX5	2.3e-69	75.57	Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 S...	[more]

BLAST of MELO3C002712.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9E0	2.71e-117	100.00	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103487438 PE=3 SV=1	[more]
A0A5D3DB03	1.62e-116	100.00	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold48...	[more]
A0A6J1K0K6	1.06e-114	97.74	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1	[more]
A0A6J1GRN0	1.06e-114	97.74	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1	[more]
A0A6J1EPA3	4.31e-114	97.74	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1	[more]

BLAST of MELO3C002712.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60970.1	2.2e-75	80.23	SNARE-like superfamily protein	[more]
AT4G08520.1	1.2e-73	78.86	SNARE-like superfamily protein	[more]
AT3G09800.1	4.6e-73	77.71	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..147 e-value: 1.2E-42 score: 147.3
None	No IPR available	PANTHER	PTHR11043:SF30	COATOMER SUBUNIT ZETA-2-LIKE	coord: 1..177
None	No IPR available	CDD	cd14829	Zeta-COP	coord: 8..143 e-value: 5.24892E-72 score: 211.636
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 7..145 e-value: 5.9E-23 score: 81.4
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 1..177
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 7..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002712.jh1.t1	MELO3C002712.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat