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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAATCCACACGAAGAAGCCTCATATGAGCAGCACTACCACAAGCACTTGGGTCAACTCTCTTTCCTTTTCTGGCTACTTGAATTCCAAAGACCGGGAAGAACCTAGTTTGGGTTCGATTGAAACACAAGATAGGAAGATCAAAGTAGTCAACCACGGATTCGAGTTCGGCGGTCCGACGTGTCGAGGTTCAAGTGTGAGCGATTATATTGGAGAGAGATCATCGCCATACATTGTAAGAAACAACAGTATAAGAAGGGGAAGCAAAAAGATAAGGGAGGAAAAGGAAGAATCAAGGTGGAGGGTTGTCTGGTCGTTTGTTTTGCCGTGTAGGGAGTGCCGAGCTAGCAAGCCCAATGTGGTTCAACCCCGACCCATTCAAGGGCCTTCCTCATGA mRNA sequence ATGGGAATCCACACGAAGAAGCCTCATATGAGCAGCACTACCACAAGCACTTGGGTCAACTCTCTTTCCTTTTCTGGCTACTTGAATTCCAAAGACCGGGAAGAACCTAGTTTGGGTTCGATTGAAACACAAGATAGGAAGATCAAAGTAGTCAACCACGGATTCGAGTTCGGCGGTCCGACGTGTCGAGGTTCAAGTGTGAGCGATTATATTGGAGAGAGATCATCGCCATACATTGTAAGAAACAACAGTATAAGAAGGGGAAGCAAAAAGATAAGGGAGGAAAAGGAAGAATCAAGGTGGAGGGTTGTCTGGTCGTTTGTTTTGCCGTGTAGGGAGTGCCGAGCTAGCAAGCCCAATGTGGTTCAACCCCGACCCATTCAAGGGCCTTCCTCATGA Coding sequence (CDS) ATGGGAATCCACACGAAGAAGCCTCATATGAGCAGCACTACCACAAGCACTTGGGTCAACTCTCTTTCCTTTTCTGGCTACTTGAATTCCAAAGACCGGGAAGAACCTAGTTTGGGTTCGATTGAAACACAAGATAGGAAGATCAAAGTAGTCAACCACGGATTCGAGTTCGGCGGTCCGACGTGTCGAGGTTCAAGTGTGAGCGATTATATTGGAGAGAGATCATCGCCATACATTGTAAGAAACAACAGTATAAGAAGGGGAAGCAAAAAGATAAGGGAGGAAAAGGAAGAATCAAGGTGGAGGGTTGTCTGGTCGTTTGTTTTGCCGTGTAGGGAGTGCCGAGCTAGCAAGCCCAATGTGGTTCAACCCCGACCCATTCAAGGGCCTTCCTCATGA Protein sequence MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGPTCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPNVVQPRPIQGPSS
Homology
BLAST of MELO3C002621 vs. NCBI nr
Match: KAA0057006.1 (hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK26433.1 hypothetical protein E5676_scaffold861G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 273.1 bits (697), Expect = 1.3e-69 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP Sbjct: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60
Query: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPN 120 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPN Sbjct: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPN 120
Query: 121 VVQPRPIQGPSS 133 VVQPRPIQGPSS Sbjct: 121 VVQPRPIQGPSS 132
BLAST of MELO3C002621 vs. NCBI nr
Match: KGN64696.1 (hypothetical protein Csa_013090 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 2.9e-50 Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 0 Query: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60 M IH KKPHMSS TTSTW+NSLSFSGYLNSKDR++PSLGSIET DRKIKVV+HGFEF P Sbjct: 1 MRIHRKKPHMSS-TTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEF-SP 60
Query: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR---WRVVWSFVLPCRECRAS 120 TC GSSVSDY GERSS YIVRNNSI+RGSKKI EEK+ESR WR+ W FVLPCRECRA Sbjct: 61 TCGGSSVSDY-GERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRAR 120
Query: 121 KPNVVQPRPIQGPS 132 KP+VVQPRPIQ PS Sbjct: 121 KPSVVQPRPIQVPS 131
BLAST of MELO3C002621 vs. NCBI nr
Match: KAG6573282.1 (hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.3 bits (225), Expect = 6.8e-15 Identity = 61/142 (42.96%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIK----VVNHGFE 60 M +H+K S+++S+ SLSFSG++ SKDR+ + I T D++ + V NH Sbjct: 1 MAVHSKTNPDISSSSSSSNYSLSFSGFVTSKDRQPDKI--IRTPDQRFEFGSSVANH--- 60
Query: 61 FGG-------PTCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR---WRVVWS 120 +GG P + VS +VRN+SIRRG ++IREE+EES W V S Sbjct: 61 YGGQSLVLPRPRPEQAQVSCKRQLERDELMVRNHSIRRGGRRIREEEEESTWSGWSVFRS 120
Query: 121 FVLPCRECRASKPNVVQPRPIQ 129 FV PCRECRASKP VV+ RP+Q Sbjct: 121 FVSPCRECRASKPAVVEARPVQ 137
BLAST of MELO3C002621 vs. NCBI nr
Match: XP_022139818.1 (uncharacterized protein LOC111010640 [Momordica charantia]) HSP 1 Score: 90.9 bits (224), Expect = 8.9e-15 Identity = 66/150 (44.00%), Postives = 84/150 (56.00%), Query Frame = 0 Query: 1 MGIHTKKP-----HMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGF 60 MGIH K P S +++ ++ +SLSF+ YL KDRE S G I+T D+ GF Sbjct: 8 MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GF 67
Query: 61 EFGGPTC------RGSS---VSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVW- 120 EFG C GS + D G+R +VRNNSIRRG ++I++E+EES W Sbjct: 68 EFGPICCDDHDGGSGSGRRRIRDDDGQRW--LVVRNNSIRRGGRRIKDEEEESSSSTSWS 127
Query: 121 ----SFVLPCRECRASKPNVV---QPRPIQ 129 SFV PCRECRASKP+ V Q PIQ Sbjct: 128 SVFRSFVSPCRECRASKPSAVIEAQAHPIQ 148
BLAST of MELO3C002621 vs. ExPASy TrEMBL
Match: A0A5D3DS79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00970 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 6.1e-70 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP Sbjct: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60
Query: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPN 120 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPN Sbjct: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVWSFVLPCRECRASKPN 120
Query: 121 VVQPRPIQGPSS 133 VVQPRPIQGPSS Sbjct: 121 VVQPRPIQGPSS 132
BLAST of MELO3C002621 vs. ExPASy TrEMBL
Match: A0A0A0LXF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 0 Query: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60 M IH KKPHMSS TTSTW+NSLSFSGYLNSKDR++PSLGSIET DRKIKVV+HGFEF P Sbjct: 1 MRIHRKKPHMSS-TTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEF-SP 60
Query: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR---WRVVWSFVLPCRECRAS 120 TC GSSVSDY GERSS YIVRNNSI+RGSKKI EEK+ESR WR+ W FVLPCRECRA Sbjct: 61 TCGGSSVSDY-GERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRAR 120
Query: 121 KPNVVQPRPIQGPS 132 KP+VVQPRPIQ PS Sbjct: 121 KPSVVQPRPIQVPS 131
BLAST of MELO3C002621 vs. ExPASy TrEMBL
Match: A0A6J1CGL7 (uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010640 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.3e-15 Identity = 66/150 (44.00%), Postives = 84/150 (56.00%), Query Frame = 0 Query: 1 MGIHTKKP-----HMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGF 60 MGIH K P S +++ ++ +SLSF+ YL KDRE S G I+T D+ GF Sbjct: 8 MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQ-------GF 67
Query: 61 EFGGPTC------RGSS---VSDYIGERSSPYIVRNNSIRRGSKKIREEKEESRWRVVW- 120 EFG C GS + D G+R +VRNNSIRRG ++I++E+EES W Sbjct: 68 EFGPICCDDHDGGSGSGRRRIRDDDGQRW--LVVRNNSIRRGGRRIKDEEEESSSSTSWS 127
Query: 121 ----SFVLPCRECRASKPNVV---QPRPIQ 129 SFV PCRECRASKP+ V Q PIQ Sbjct: 128 SVFRSFVSPCRECRASKPSAVIEAQAHPIQ 148
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0057006.1 | 1.3e-69 | 100.00 | hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK2643... | [more] |
KGN64696.1 | 2.9e-50 | 81.34 | hypothetical protein Csa_013090 [Cucumis sativus] | [more] |
KAG6573282.1 | 6.8e-15 | 42.96 | hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022139818.1 | 8.9e-15 | 44.00 | uncharacterized protein LOC111010640 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DS79 | 6.1e-70 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LXF9 | 1.4e-50 | 81.34 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1 | [more] |
A0A6J1CGL7 | 4.3e-15 | 44.00 | uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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