MELO3C002608.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002608.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	BHLH domain-containing protein
Location	chr12: 22642297 .. 22643303 (+)
RNA-Seq Expression	MELO3C002608.jh1
Synteny	MELO3C002608.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGTAACGTGTTATTAGAGTCGATAAATTTCAAATCGAAAATCAATCCATAATAAAATTGAAATTCATCCCGAAAATGATAATAATAAATTGGCATATGACATCATCACCGGCGGCTCTAATTTTAACTTTACCCTTAATAATAAATATAAAAGAAGAAGAAGCAAATCTTTGTGAAGGGTTTTGTGAAAAGCTCTCAATAATGTCGAACCCTATCCGTTGTCAACCAACTCCACAAAGCGATCGAAAATTCGTAGAAAGGAATCGAAGAAAAGAAATGAAATCCCTTTTCTCGACACTAAATTCTCTTCTTCCAAATCATACCTCAAGGGTTTAATTTCTTTCTGATCTATGTGTTTTTCTTTTTCTTTCTTTTTTTTTTTCACTTCCATTTGTTTTTTTGTTTAAAATAACCCCATGAGAAAAAGAAAAGATGATTGAAAAATGTTTGTGTTCAGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCCACGAATTACATAAAAGAATTACAAAAGAACATACAGAAATTGAAAGAGAAGAAAGAGGAGCTAATGGGAAAAAATAAAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGATTTGAACATGAAACAAAACCTAAATTATTGCTACAAGTTAAAGCTCATCAAATTGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTCTCACTTTATTCTTCAACAAGTCCTTCGACTTCTTCAAGATAATGGAGCCGAGATCCTCAATGTCAACCAGTCCATGTTCACAGATCGGGTTTTCCATAAGATAACGGCTCAGGTACTCTATTATTATCTCATTATGTCTCATGATGATTTAGGTCTCCTTTGATAAATCGTCCGTCTGATTTTTTGATTTGGTTTTTTAAATTTTGGGTTTCATTATTGTTGGCATTTTGTTTGGATATTTTCAAATTTCAAAAGAATTGAATTAGGTATGAAATTTTTTGGTTTTTTGGAAAGTTTCCAAAAAAAGAAAAAAAGAAAAGAAAAAAAGCATTTTTAGTAGTCAAAGCTTGGGTTGGTTTTTGAAAACTATGGTTTTTTTAAGCTAATGGTGAAAATGAAAGGAACAAATTGATGATGGTGTTTAATATATGAACTAAAATGGATAAGCTTTATCATGGATGTATTTAGGAGTGATTTTGAGTTGATCATATTCAGTTTTTTTTATTAAATTATTTTTCTTTTAAAAAAAATGGTAACTTGAACTAAAATTGATTTTAGATAACTAAAAAAATCATTTCAAATTGATTTTGAAAAAAATTAGGTGATAAATGATTTTGTGTTAATATCATTTCCAAAATGGTCGTCATATTGAGTTGATGTGTAAAATATTGATAGCTAGCTATTTGTAATTTTTTTTAAATTTTAAATATTAATACAAAAAAGTGTCTCACTTTAAATTGTTAATAAAACAAACAATATATGTTTTGAATTTTCCTTCGAACATCTTATACGTTTACAAAAATAACACAAACAATATGTTTTGACAATTCAACGACAATAACAATATATGTTTTATTTTTGACAAATTTCTTAAAAAAAATAAAACAAATAATATGTTTTGAATTTTTTTTTCAATATCTATATATAAACATATATCTACTACGAATTCTTTCCAATAAAATAAATATAAATGAATTTTATTACAATTATTTAAGTCTTGTTCGGTAACTATTTCAACTTTTCATTTTTGTTTTTTCTATTTTTAGATTCTATTTTTAAATTTGTGTTTTTTAAAAACAAAAATCTTATATGTTTTTATTTTTGTTTTTGTTTTTCTCTATCTTTTAGATTTTATTTTTAATTTTTTGTTTATTAAAATAAAAAATCTTATATTTTGGTAATCGATTTTGTTTTATGTTTTTTTTTTAAAACAAAATGCAAATTTTTTAAAGTTTTTTTTCTTCATTATTTAAAACAAATTTCTTGTTTAAAAAACAAAAAGTGAGTTTATTATCAAACACATACTATTTTAAAAAAATTAATTTTCAAAAACAAAAAATAGAAGACAAATAGGTTAAATAATTATTTCTCAAATAAAAAATATAATTATTTATTGAGTAACCACTTTTTGGAACCAAACATAAGAATGAAAAATCAACCGGCTCTAAACAATTGAAAATCAATTTTTTAAGAGTTTAATACCAATTCATATAAATGGAAAAAGAACTTCACCACTTTAGAGGAAAAACTTGTACGAAGACACTTATAAAAGTTAAGAGTTTAAATTGATAGATTTACGAAAGTCAAGAGTTTAAAATTGATAGATTTATAAAAATTCAAAGTTTAAATTGATGAATCGGCGAGAAATTTAAGTTTCAAATTAATACAATTATTAAATTAAGATTCAAAATAATACAATTATTAATTTAGAGTTCAAATTAATGAACAATCATGGTTAGAAAGGAAAAAAAAAAAAAAAAGAAACTTAAAGGTGAGAGAGGTGTTCAAAGGCCCTAGTTTTTTTTTAAATAAAGTAAAAAAGTCAAATAGACCTTTAACGATCAAATTTTGAATTTAAAATCATTGCTATGAATTAGTAGAATTTATAAGTTAGAATTAAGAAAAAATTGTAGTTCTAATTTATAATTTAAAAAACCAACAATAACAATAACAATAACAATAACAATGTAGTTTTAAACCTGCGAAAAGAATCTAAATTGTGGTCTCAATAATAATAATAATGTAGTTTTAAACCTGCGAAAAGAATCTAAATTGTGGTCTCATTCATATTACCATTACTAGTAAGCTAAGCATAAGAATTACATTAACCCATTACTTTCTCATGTATTATTTGTCATATATAATGGCAATAAATTAGGTAATTTAGTATATAGTAGATGATATATAATTAAGATGCAAATTACAATGTGGAAGAAGAAGAAGAAGATGATGATGCTGATGCTGATGATGATGATATTGAAAAATTTAGGTGGATGGAGAAGGAATTGGGCCAGGAGATGGTGAAAGGATTTGTAAGACAGTGAAGAAATTTGTTTCACAGTACAAAGATGAGCAATGCAGTGTTGATTACAATGGCAATGGCAATGGCAATGGTGGGGAAGATTTATGAAGCCATTTATTATTGTACTGTCTTTTATGGATAATTAATGCTTCAAATCAAACCATCCCATTATTATTATATCATAATGTTCCTTTGCATTATTATTGGTGAATTATATCCATATAATCCCAAATTGTTTGTT

mRNA sequence

AAACGTAACGTGTTATTAGAGTCGATAAATTTCAAATCGAAAATCAATCCATAATAAAATTGAAATTCATCCCGAAAATGATAATAATAAATTGGCATATGACATCATCACCGGCGGCTCTAATTTTAACTTTACCCTTAATAATAAATATAAAAGAAGAAGAAGCAAATCTTTGTGAAGGGTTTTGTGAAAAGCTCTCAATAATGTCGAACCCTATCCGTTGTCAACCAACTCCACAAAGCGATCGAAAATTCGTAGAAAGGAATCGAAGAAAAGAAATGAAATCCCTTTTCTCGACACTAAATTCTCTTCTTCCAAATCATACCTCAAGGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCCACGAATTACATAAAAGAATTACAAAAGAACATACAGAAATTGAAAGAGAAGAAAGAGGAGCTAATGGGAAAAAATAAAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGATTTGAACATGAAACAAAACCTAAATTATTGCTACAAGTTAAAGCTCATCAAATTGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTCTCACTTTATTCTTCAACAAGTCCTTCGACTTCTTCAAGATAATGGAGCCGAGATCCTCAATGTCAACCAGTCCATGTTCACAGATCGGGTTTTCCATAAGATAACGGCTCAGGTGGATGGAGAAGGAATTGGGCCAGGAGATGGTGAAAGGATTTGTAAGACAGTGAAGAAATTTGTTTCACAGTACAAAGATGAGCAATGCAGTGTTGATTACAATGGCAATGGCAATGGCAATGGTGGGGAAGATTTATGAAGCCATTTATTATTGTACTGTCTTTTATGGATAATTAATGCTTCAAATCAAACCATCCCATTATTATTATATCATAATGTTCCTTTGCATTATTATTGGTGAATTATATCCATATAATCCCAAATTGTTTGTT

Coding sequence (CDS)

ATGATAATAATAAATTGGCATATGACATCATCACCGGCGGCTCTAATTTTAACTTTACCCTTAATAATAAATATAAAAGAAGAAGAAGCAAATCTTTGTGAAGGGTTTTGTGAAAAGCTCTCAATAATGTCGAACCCTATCCGTTGTCAACCAACTCCACAAAGCGATCGAAAATTCGTAGAAAGGAATCGAAGAAAAGAAATGAAATCCCTTTTCTCGACACTAAATTCTCTTCTTCCAAATCATACCTCAAGGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCCACGAATTACATAAAAGAATTACAAAAGAACATACAGAAATTGAAAGAGAAGAAAGAGGAGCTAATGGGAAAAAATAAAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGATTTGAACATGAAACAAAACCTAAATTATTGCTACAAGTTAAAGCTCATCAAATTGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTCTCACTTTATTCTTCAACAAGTCCTTCGACTTCTTCAAGATAATGGAGCCGAGATCCTCAATGTCAACCAGTCCATGTTCACAGATCGGGTTTTCCATAAGATAACGGCTCAGGTGGATGGAGAAGGAATTGGGCCAGGAGATGGTGAAAGGATTTGTAAGACAGTGAAGAAATTTGTTTCACAGTACAAAGATGAGCAATGCAGTGTTGATTACAATGGCAATGGCAATGGCAATGGTGGGGAAGATTTATGA

Protein sequence

MIIINWHMTSSPAALILTLPLIINIKEEEANLCEGFCEKLSIMSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERICKTVKKFVSQYKDEQCSVDYNGNGNGNGGEDL

Homology

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BLAST of MELO3C002608.jh1 vs. NCBI nr
Match: XP_008442634.2 (PREDICTED: transcription factor bHLH118-like [Cucumis melo])

HSP 1 Score: 316 bits (809), Expect = 2.28e-107
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60
           MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI
Sbjct: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60

Query: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEV 120
           KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEV
Sbjct: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEV 120

Query: 121 FLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           FLTTGSD HFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV
Sbjct: 121 FLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166

[Close]

BLAST of MELO3C002608.jh1 vs. NCBI nr
Match: XP_031737224.1 (transcription factor bHLH162 isoform X3 [Cucumis sativus])

HSP 1 Score: 277 bits (708), Expect = 1.30e-92
Identity = 150/168 (89.29%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60
           MSNPIRCQPTPQS+RKFVERNRRKEMK+LFSTLNSLLPN TS EAPRTVPDQLEDATNYI
Sbjct: 1   MSNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYI 60

Query: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVE 120
           KELQKNI+KLKEKKE+LMG   MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVE
Sbjct: 61  KELQKNIKKLKEKKEKLMG---MEEDEEAEGRRRRRGYEDETKPKLSVHVKAHQIGSSVE 120

Query: 121 VFLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVL 167
           VFLTTGSD HF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQ+L
Sbjct: 121 VFLTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQLL 165

[Close]

BLAST of MELO3C002608.jh1 vs. NCBI nr
Match: XP_004146605.1 (transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetical protein Csa_013539 [Cucumis sativus])

HSP 1 Score: 277 bits (708), Expect = 4.03e-92
Identity = 150/167 (89.82%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60
           MSNPIRCQPTPQS+RKFVERNRRKEMK+LFSTLNSLLPN TS EAPRTVPDQLEDATNYI
Sbjct: 1   MSNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYI 60

Query: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVE 120
           KELQKNI+KLKEKKE+LMG   MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVE
Sbjct: 61  KELQKNIKKLKEKKEKLMG---MEEDEEAEGRRRRRGYEDETKPKLSVHVKAHQIGSSVE 120

Query: 121 VFLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           VFLTTGSD HF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV
Sbjct: 121 VFLTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 164

[Close]

BLAST of MELO3C002608.jh1 vs. NCBI nr
Match: XP_031737221.1 (transcription factor bHLH162 isoform X2 [Cucumis sativus])

HSP 1 Score: 275 bits (704), Expect = 1.53e-91
Identity = 149/166 (89.76%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60
           MSNPIRCQPTPQS+RKFVERNRRKEMK+LFSTLNSLLPN TS EAPRTVPDQLEDATNYI
Sbjct: 1   MSNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYI 60

Query: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVE 120
           KELQKNI+KLKEKKE+LMG   MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVE
Sbjct: 61  KELQKNIKKLKEKKEKLMG---MEEDEEAEGRRRRRGYEDETKPKLSVHVKAHQIGSSVE 120

Query: 121 VFLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQ 165
           VFLTTGSD HF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQ
Sbjct: 121 VFLTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQ 163

[Close]

BLAST of MELO3C002608.jh1 vs. NCBI nr
Match: XP_038876951.1 (transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876954.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876955.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876956.1 transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 191 bits (486), Expect = 1.80e-58
Identity = 113/174 (64.94%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61
           +NPI C P+     K +ERN R+EMK+LFSTLNSLLPN  S EA RTVPDQLE+ATNYIK
Sbjct: 3   NNPICCPPS-----KLIERNGRREMKALFSTLNSLLPNQNSGEA-RTVPDQLEEATNYIK 62

Query: 62  ELQKNIQKLKEKKEELMGKNKM--------EEDEEAEGRRRRRFEHETKPKLLLQVKAHQ 121
           ELQ NI++LKEKKE+L  K K+        EEDE     +RR+ +HE +P LLLQVKAH+
Sbjct: 63  ELQNNIERLKEKKEKLKQKQKVKGKYKMGVEEDE-----KRRKCKHEIEPNLLLQVKAHR 122

Query: 122 IGSSVEVFLTTG-SDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           +GSSVEVFLTTG SD HFILQQ++RLLQ NGA ILN+NQS+   R FHKITAQV
Sbjct: 123 VGSSVEVFLTTGISDYHFILQQIIRLLQHNGAHILNLNQSILQHRAFHKITAQV 165

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19
Identity = 60/154 (38.96%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 14  DRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEK 73
           DRK VE+NRR +MKSL+S L SLLP+H+S E P T+PDQL++A NYIK+LQ N++K +E+
Sbjct: 15  DRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQVNVEKKRER 74

Query: 74  KEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSHFILQ 133
           K  L+    +E+               + P+ L +++  + GS   +FL T  +  F+  
Sbjct: 75  KRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKFMFC 134

Query: 134 QVLRLL-QDNGAEILNVNQSMFTDRVFHKITAQV 167
           +++R+L ++ GAEI +   S+  D VFH +  +V
Sbjct: 135 EIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKV 167

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 19  ERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKEELM 78
           ER RR+EM SL+++L SLLP H  +   R+  DQ+ +A NYIK LQ+ I++L  ++++LM
Sbjct: 10  ERQRRQEMASLYASLRSLLPLHFIK-GKRSTSDQVNEAVNYIKYLQRKIKELSVRRDDLM 69

Query: 79  GKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTT---GSDSHFILQQV 138
             ++      + G  +   E  +       V   Q    VE+ L++   G    F    V
Sbjct: 70  VLSRGSLLGSSNGDFKEDVEMISGKN---HVVVRQCLVGVEIMLSSRCCGGQPRF--SSV 129

Query: 139 LRLLQDNGAEILNVNQSMFTDRVFHKITAQV 167
           L++L + G  +LN   S+  DR+ + I A+V
Sbjct: 130 LQVLSEYGLCLLNSISSIVDDRLVYTIQAEV 154

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 46/155 (29.68%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 16  KFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKE 75
           K +E+ RR+EM SL+++L SLLP     +  R+  DQ++ A NYI  LQ+NI+ +  K++
Sbjct: 7   KEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDINSKRD 66

Query: 76  ELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSHFILQ-- 135
           +L+            GR  R    +   ++   V        +E+ L+       ILQ  
Sbjct: 67  DLV---------LLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLS-------ILQTP 126

Query: 136 --QVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 167
              VL++L+++G  +L    S   DR+ H + A+V
Sbjct: 127 FSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEV 144

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 41/150 (27.33%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 19  ERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKEELM 78
           ER+RRK++ +LFS+L S LP  + +    ++P+ +  +  YI ELQ+ +++L +KKEE++
Sbjct: 80  ERDRRKKINTLFSSLRSCLP-ASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEIL 139

Query: 79  GKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSH-FILQQVLR 138
            +   + D E   ++    + +     L  V A ++G +  +   + S  H F +  VL 
Sbjct: 140 VRVSGQRDFELYDKQ----QPKAVASYLSTVSATRLGDNEVMVQVSSSKIHNFSISNVLG 199

Query: 139 LLQDNGAEILNVNQSMFT-DRVFHKITAQV 167
            ++++G  +++V+ S    +R+F+ +  QV
Sbjct: 200 GIEEDGFVLVDVSSSRSQGERLFYTLHLQV 224

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-05
Identity = 42/157 (26.75%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 12  QSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLK 71
           +  R   E++RR  MK LFS L+S    H S      VP  ++ AT+Y+ +L++N+  LK
Sbjct: 16  REQRNLREKDRRMRMKHLFSILSS----HVSPTRKLPVPHLIDQATSYMIQLKENVNYLK 75

Query: 72  EKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSD-SHF 131
           EKK  L+           +G     +E      LL ++      S++E+ L    +    
Sbjct: 76  EKKRTLL-----------QGELGNLYEGSF---LLPKLSIRSRDSTIEMNLIMDLNMKRV 135

Query: 132 ILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVL 168
           +L +++ + ++ GA++++ N     DR  + I AQ +
Sbjct: 136 MLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAI 154

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B660 (transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.10e-107
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60
           MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI
Sbjct: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60

Query: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEV 120
           KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEV
Sbjct: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEV 120

Query: 121 FLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           FLTTGSD HFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV
Sbjct: 121 FLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LUL3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 SV=1)

HSP 1 Score: 277 bits (708), Expect = 1.95e-92
Identity = 150/167 (89.82%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MSNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYI 60
           MSNPIRCQPTPQS+RKFVERNRRKEMK+LFSTLNSLLPN TS EAPRTVPDQLEDATNYI
Sbjct: 1   MSNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYI 60

Query: 61  KELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRR-FEHETKPKLLLQVKAHQIGSSVE 120
           KELQKNI+KLKEKKE+LMG   MEEDEEAEGRRRRR +E ETKPKL + VKAHQIGSSVE
Sbjct: 61  KELQKNIKKLKEKKEKLMG---MEEDEEAEGRRRRRGYEDETKPKLSVHVKAHQIGSSVE 120

Query: 121 VFLTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           VFLTTGSD HF LQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV
Sbjct: 121 VFLTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 164

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K2Y3 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 5.55e-49
Identity = 89/165 (53.94%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61
           +N I C  + + DRK +ERNRR EMK+LFS L+SL+PN +S EA  T+ DQLE+ATNYIK
Sbjct: 24  NNFIHCPSSTKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNYIK 83

Query: 62  ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVF 121
           +L++N++KLKEK+E+LMG                  E ETK +LL+QV+AHQ+GSS+EV 
Sbjct: 84  QLKENVEKLKEKREKLMGSR----------------EGETKARLLVQVEAHQVGSSLEVL 143

Query: 122 LTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           LTTGSD  F+L Q+L+LLQ+NG +I+ +N S   DRVFHKI A++
Sbjct: 144 LTTGSDYQFVLNQILQLLQENGTQIVYINHSTVKDRVFHKIIAEM 172

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K483 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 2.27e-45
Identity = 80/164 (48.78%), Postives = 119/164 (72.56%), Query Frame = 0


Query: 3   NPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKE 62
           N I C  + ++D++ +ERNRR EMK+L S L+SL+PN  S E   T+PDQLE+ATNYIK+
Sbjct: 4   NFIYCPSSAKTDQEIIERNRRDEMKALLSQLHSLVPNQNSTEGETTLPDQLENATNYIKQ 63

Query: 63  LQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFL 122
           L++N++KLKEK+E+LMG  +           +     E K ++++QV+AH +GSS+E+ L
Sbjct: 64  LKENVEKLKEKREKLMGLGE-----------KSTITSENKARVIVQVEAHLVGSSLEILL 123

Query: 123 TTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           TTGSD H +L+Q+++LLQ+NG EI+++NQS   +R FHKI AQ+
Sbjct: 124 TTGSDYHLVLRQIIQLLQENGTEIVDINQSTVANRAFHKIIAQM 156

[Close]

BLAST of MELO3C002608.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GT92 (uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC111457229 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 4.42e-44
Identity = 87/165 (52.73%), Postives = 119/165 (72.12%), Query Frame = 0


Query: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61
           +N I    + + DRK +ERNRR EMK+LFS L+SL+PN +S EA  T+ DQLE+ATNYIK
Sbjct: 24  NNFIHSPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSMEAETTLLDQLENATNYIK 83

Query: 62  ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVF 121
           +L++N++KLKEKKE+LM   K+ E+             E K +LL+QV+AHQ+GSS+E  
Sbjct: 84  QLKENVEKLKEKKEKLM---KLGEESARSS--------EIKARLLVQVEAHQVGSSLEFL 143

Query: 122 LTTGSDSHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 166
           LTT SD H +L+QVL+LLQ+NG +I+ +N S   DRVFHKI A++
Sbjct: 144 LTTRSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEM 177

[Close]

BLAST of MELO3C002608.jh1 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 7.1e-21
Identity = 60/154 (38.96%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 14  DRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEK 73
           DRK VE+NRR +MKSL+S L SLLP+H+S E P T+PDQL++A NYIK+LQ N++K +E+
Sbjct: 15  DRKTVEKNRRMQMKSLYSELISLLPHHSSTE-PLTLPDQLDEAANYIKKLQVNVEKKRER 74

Query: 74  KEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSHFILQ 133
           K  L+    +E+               + P+ L +++  + GS   +FL T  +  F+  
Sbjct: 75  KRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKFMFC 134

Query: 134 QVLRLL-QDNGAEILNVNQSMFTDRVFHKITAQV 167
           +++R+L ++ GAEI +   S+  D VFH +  +V
Sbjct: 135 EIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKV 167

[Close]

BLAST of MELO3C002608.jh1 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-07
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 19  ERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKEELM 78
           ER RR+EM SL+++L SLLP H  +   R+  DQ+ +A NYIK LQ+ I++L  ++++LM
Sbjct: 10  ERQRRQEMASLYASLRSLLPLHFIK-GKRSTSDQVNEAVNYIKYLQRKIKELSVRRDDLM 69

Query: 79  GKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTT---GSDSHFILQQV 138
             ++      + G  +   E  +       V   Q    VE+ L++   G    F    V
Sbjct: 70  VLSRGSLLGSSNGDFKEDVEMISGKN---HVVVRQCLVGVEIMLSSRCCGGQPRF--SSV 129

Query: 139 LRLLQDNGAEILNVNQSMFTDRVFHKITAQV 167
           L++L + G  +LN   S+  DR+ + I A+V
Sbjct: 130 LQVLSEYGLCLLNSISSIVDDRLVYTIQAEV 154

[Close]

BLAST of MELO3C002608.jh1 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 46/155 (29.68%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 16  KFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKE 75
           K +E+ RR+EM SL+++L SLLP     +  R+  DQ++ A NYI  LQ+NI+ +  K++
Sbjct: 7   KEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDINSKRD 66

Query: 76  ELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSHFILQ-- 135
           +L+            GR  R    +   ++   V        +E+ L+       ILQ  
Sbjct: 67  DLV---------LLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLS-------ILQTP 126

Query: 136 --QVLRLLQDNGAEILNVNQSMFTDRVFHKITAQV 167
              VL++L+++G  +L    S   DR+ H + A+V
Sbjct: 127 FSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEV 144

[Close]

BLAST of MELO3C002608.jh1 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 41/150 (27.33%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 19  ERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLKEKKEELM 78
           ER+RRK++ +LFS+L S LP  + +    ++P+ +  +  YI ELQ+ +++L +KKEE++
Sbjct: 80  ERDRRKKINTLFSSLRSCLP-ASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEIL 139

Query: 79  GKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSDSH-FILQQVLR 138
            +   + D E   ++    + +     L  V A ++G +  +   + S  H F +  VL 
Sbjct: 140 VRVSGQRDFELYDKQ----QPKAVASYLSTVSATRLGDNEVMVQVSSSKIHNFSISNVLG 199

Query: 139 LLQDNGAEILNVNQSMFT-DRVFHKITAQV 167
            ++++G  +++V+ S    +R+F+ +  QV
Sbjct: 200 GIEEDGFVLVDVSSSRSQGERLFYTLHLQV 224

[Close]

BLAST of MELO3C002608.jh1 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 3.8e-06
Identity = 42/157 (26.75%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 12  QSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIKELQKNIQKLK 71
           +  R   E++RR  MK LFS L+S    H S      VP  ++ AT+Y+ +L++N+  LK
Sbjct: 16  REQRNLREKDRRMRMKHLFSILSS----HVSPTRKLPVPHLIDQATSYMIQLKENVNYLK 75

Query: 72  EKKEELMGKNKMEEDEEAEGRRRRRFEHETKPKLLLQVKAHQIGSSVEVFLTTGSD-SHF 131
           EKK  L+           +G     +E      LL ++      S++E+ L    +    
Sbjct: 76  EKKRTLL-----------QGELGNLYEGSF---LLPKLSIRSRDSTIEMNLIMDLNMKRV 135

Query: 132 ILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVL 168
           +L +++ + ++ GA++++ N     DR  + I AQ +
Sbjct: 136 MLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAI 154

The following BLAST results are available for this feature:

BLAST of MELO3C002608.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442634.2	2.28e-107	99.40	PREDICTED: transcription factor bHLH118-like [Cucumis melo]	[more]
XP_031737224.1	1.30e-92	89.29	transcription factor bHLH162 isoform X3 [Cucumis sativus]	[more]
XP_004146605.1	4.03e-92	89.82	transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetic...	[more]
XP_031737221.1	1.53e-91	89.76	transcription factor bHLH162 isoform X2 [Cucumis sativus]	[more]
XP_038876951.1	1.80e-58	64.94	transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcript...	[more]

BLAST of MELO3C002608.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	1.0e-19	38.96	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
Q9FLI1	2.8e-06	32.45	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9STJ7	1.8e-05	29.68	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9M1K1	3.1e-05	27.33	Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1	[more]
F4I4E1	5.4e-05	26.75	Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=...	[more]

BLAST of MELO3C002608.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B660	1.10e-107	99.40	transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 S...	[more]
A0A0A0LUL3	1.95e-92	89.82	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 S...	[more]
A0A6J1K2Y3	5.55e-49	53.94	transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE...	[more]
A0A6J1K483	2.27e-45	48.78	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE...	[more]
A0A6J1GT92	4.42e-44	52.73	uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]

BLAST of MELO3C002608.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	7.1e-21	38.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	2.0e-07	32.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	1.3e-06	29.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56970.1	2.2e-06	27.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10585.1	3.8e-06	26.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..141
None	No IPR available	PANTHER	PTHR13935:SF90	TRANSCRIPTION FACTOR BHLH162	coord: 51..230
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 56..120 e-value: 1.47025E-22 score: 86.2031
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 58..111 e-value: 1.1E-5 score: 34.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 60..106 e-value: 3.4E-8 score: 33.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 52..105 score: 11.248639
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 54..132 e-value: 6.7E-12 score: 47.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 58..123
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 51..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002608.jh1.t2	MELO3C002608.jh1.t2	mRNA
MELO3C002608.jh1.t1	MELO3C002608.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity