MELO3C002599 (gene) Melon (DHL92) v4

Overview


Name	MELO3C002599
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DNA ligase 1
Location	chr12: 21487343 .. 21489802 (-)
RNA-Seq Expression	MELO3C002599
Synteny	MELO3C002599

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTACAAGTCTTGGTAATTCAAAATTTCCAAACGCTTCGAAACAGAACGGTTCTCCATCTTCATTTCCAAAGTTTTTCCTTCAACCTCCATCTAGATGGTGAACATCAAAATTCCTACCGCTAAAACAAGATCCAGGAAGCGTGTCTCCGACACCGATCTCACGAGCTCCGAACAAAGGACGCGAACCAACGATGATATCGACCTTGATCTCGACCTTTCCGAGTACGTACTGTTTTTTTTCCATTTCTGTTCCACTTTAATTCTGGTGATGTTTTGGAGTAGCTTAAAAATGATGTTTACGGTTTGCAGCGATCTCAAAGGAATAGTGTCGGCGTTGAATCAGATCAAAGAGAGAGCTCATAAGGACGACCTGAAGAAGAATGAAGAGACGATCTCAAGGTAATTTGAGTGGTTTTGTTCGATCGGTACTTTTATTGACTGGAGCTGCTGAAATTTTGTATTCTTGTAAATTTATTTCCGATTCTCGAATTTCTGTACACGGCTACTCATTTGTACCTTCGTTTTTCTTCTTCTGGTAGAATTGACCTGGCCTCACTCGTAGTTTGATTTTATGATTTGTTTGATGTGATTCAATTTTAAACTTGAAATGACAGCCTGTTCAAACTTAGTTTACTGGATCAGACTTGCTTCGTCTCACCGTTTCTGTCAAACATTTTACCGTTTTCCAACTTCAATCCATGCCGGTTTTTATTGACTGAGGAGTTCATTTATTTTCTGAGCCGATACTCTTCTTCTTGTCTTGCACTAGAAAAATGTTTTAAATGTTAATTTCATGTTATTGACAGTGTAGCGACTGAGATGAGAACAATGATTGAGGAGGTGAAATCTAAACTTGAGAAGGACAGGTAGATTTTAGAACTATACAGAGAGTTCAGATGTTGCTTGCTTCAAATTTTGGTTGAATTAGTTATAAACGAACGAATGCAATTTAATTCCTCCAACCAATTTCAGGCAAAATTTTGCAAAAGCTCTATCGAAAAGCTCAAAAGAGGTTGGTGGATAACCACGACTTGAAATAGAGGCCATCCAAGCTCAAATTTGAAGTCATTATATTTCGTTTCTAGTTACGTTCCATTAATGCATTTTCCATATGTTGTGTTAAAATCAATACGGCTTCTTTATAGTGTGAAAACTGTTTGAAGGACGAAACTGCTAAATTCCAAGCACTTTACGAGAAATTCACAAAAGAGAAAGCTACACATCTTCAGGCCATAAAAGGTAACATCCACTTCGAGTATTATAGCCAGAAGTATGCATTATTTAATATTTACTACTGTTTTGACTAATTTTCATTTTATTTATAAATATCAACTGGAGCAAGACCTTTATCATGAGTAAATCCTTACCACGTTACAATTTTCCAAGATCGCATTCATGAGGTTAGGTTTCATTCCATAGCATAGAAGAATCCTCAATCTCTGAGAGACTGATCATAGTGGTGAGTGGCAATTGAAGGCTTTGACCATGGAATTAGGTCCTCAACTACAATATGTGTGTTCCATCGATACTAGTTGCTTTGCCTTTTGGAATCCTTACTAAATGTGTATGATATATTGGTATTGAAGAACCTTTCACTATTTGGTTGAAATTTCAAGTCAATTTCATTTATCTACTGCCAATCTATCAGATATTCTGGTATATTCACTATGAGCCTATGATCTCAAACCCTTGGAAGCTCTAAGAAAAGCCACCTCTTTCTTCTTCAAGGCGGTTCTTTAAATATATTTTCGTAATTCATGATACCGTTTGACTTTGGCAGATACCATTTCAAAATTTGAAGAGGAGAAAGAAAGGCTGTTCGCGAAATATGAACAACTGAGTAAGCAAGAAGTCATTGATCAATCAGCTCAAAACGTTTTATGATTATGATTATGATTATGATTATGATTATTATCCAATTCCCTTCGCGTATGTAACAGGAAAGAGAGAAAGGAGCTTGATATCTGAACAAGAGAAAGCTTGTGCTGAAAAGATTGCTCAATTGGAAGAGTCTTTGAAAAGAAAAAAGCAGGTATAGTACGACTTGTAATTCATAAATCAGAACTCAACTAACGCCTTCCACCTTTATGCTAACGGAAATTTTACTTAAACACTTGTGGATCTGGAACATAGGATGATAAGACTTTCAGCCTTTTGAGGAAGACTCTTGGTTCATTTCTTGATACTGGCTCAGATGAGGACTTCCCAGCTGATGATTGAAAGGTGTTAATGAATTGAGAAATATTATTACTCTGCATCACTCTTTTTAGTACTCAAAAATAGATCCGCTCTTCTCTTTTGCAAACTATTTGATGCAATTATCTAGTATACATACTAGTAGACATATTTCTCTGATCCTCTCTTTGAGGATTAGTTTTCTTTATAGTTTGGATTGTAAATTGAAATACAAATTTGAGTCGTAAGGGTCGTGGTTGGCCTATGGCTATAGCAGCTCTGC

mRNA sequence

ATTTACAAGTCTTGGTAATTCAAAATTTCCAAACGCTTCGAAACAGAACGGTTCTCCATCTTCATTTCCAAAGTTTTTCCTTCAACCTCCATCTAGATGGTGAACATCAAAATTCCTACCGCTAAAACAAGATCCAGGAAGCGTGTCTCCGACACCGATCTCACGAGCTCCGAACAAAGGACGCGAACCAACGATGATATCGACCTTGATCTCGACCTTTCCGACGATCTCAAAGGAATAGTGTCGGCGTTGAATCAGATCAAAGAGAGAGCTCATAAGGACGACCTGAAGAAGAATGAAGAGACGATCTCAAGTGTAGCGACTGAGATGAGAACAATGATTGAGGAGGTGAAATCTAAACTTGAGAAGGACAGGCAAAATTTTGCAAAAGCTCTATCGAAAAGCTCAAAAGAGTGTGAAAACTGTTTGAAGGACGAAACTGCTAAATTCCAAGCACTTTACGAGAAATTCACAAAAGAGAAAGCTACACATCTTCAGGCCATAAAAGATACCATTTCAAAATTTGAAGAGGAGAAAGAAAGGCTGTTCGCGAAATATGAACAACTGAGAAAGAGAGAAAGGAGCTTGATATCTGAACAAGAGAAAGCTTGTGCTGAAAAGATTGCTCAATTGGAAGAGTCTTTGAAAAGAAAAAAGCAGGATGATAAGACTTTCAGCCTTTTGAGGAAGACTCTTGGTTCATTTCTTGATACTGGCTCAGATGAGGACTTCCCAGCTGATGATTGAAAGGTGTTAATGAATTGAGAAATATTATTACTCTGCATCACTCTTTTTAGTACTCAAAAATAGATCCGCTCTTCTCTTTTGCAAACTATTTGATGCAATTATCTAGTATACATACTAGTAGACATATTTCTCTGATCCTCTCTTTGAGGATTAGTTTTCTTTATAGTTTGGATTGTAAATTGAAATACAAATTTGAGTCGTAAGGGTCGTGGTTGGCCTATGGCTATAGCAGCTCTGC

Coding sequence (CDS)

ATGGTGAACATCAAAATTCCTACCGCTAAAACAAGATCCAGGAAGCGTGTCTCCGACACCGATCTCACGAGCTCCGAACAAAGGACGCGAACCAACGATGATATCGACCTTGATCTCGACCTTTCCGACGATCTCAAAGGAATAGTGTCGGCGTTGAATCAGATCAAAGAGAGAGCTCATAAGGACGACCTGAAGAAGAATGAAGAGACGATCTCAAGTGTAGCGACTGAGATGAGAACAATGATTGAGGAGGTGAAATCTAAACTTGAGAAGGACAGGCAAAATTTTGCAAAAGCTCTATCGAAAAGCTCAAAAGAGTGTGAAAACTGTTTGAAGGACGAAACTGCTAAATTCCAAGCACTTTACGAGAAATTCACAAAAGAGAAAGCTACACATCTTCAGGCCATAAAAGATACCATTTCAAAATTTGAAGAGGAGAAAGAAAGGCTGTTCGCGAAATATGAACAACTGAGAAAGAGAGAAAGGAGCTTGATATCTGAACAAGAGAAAGCTTGTGCTGAAAAGATTGCTCAATTGGAAGAGTCTTTGAAAAGAAAAAAGCAGGATGATAAGACTTTCAGCCTTTTGAGGAAGACTCTTGGTTCATTTCTTGATACTGGCTCAGATGAGGACTTCCCAGCTGATGATTGA

Protein sequence

MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD

Homology

[Close]

BLAST of MELO3C002599 vs. NCBI nr
Match: XP_008442500.1 (PREDICTED: DNA ligase 1 isoform X1 [Cucumis melo] >KAA0056986.1 DNA ligase 1 isoform X1 [Cucumis melo var. makuwa] >TYK26414.1 DNA ligase 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]

BLAST of MELO3C002599 vs. NCBI nr
Match: XP_004146600.1 (DNA ligase 1 isoform X1 [Cucumis sativus] >XP_031744624.1 DNA ligase 1 isoform X1 [Cucumis sativus] >KGN64675.1 hypothetical protein Csa_013771 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 6.4e-103
Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           M NIKIPTAKTRSRKRVSDTDL+SS+QR +TNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MGNIKIPTAKTRSRKRVSDTDLSSSDQRKQTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]

BLAST of MELO3C002599 vs. NCBI nr
Match: XP_008442507.1 (PREDICTED: DNA ligase 1 isoform X2 [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 210/216 (97.22%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKE      DETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKE------DETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 210

[Close]

BLAST of MELO3C002599 vs. NCBI nr
Match: XP_038895277.1 (DNA ligase 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 202/216 (93.52%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           M N+K PT K R RKRVSDTDLTSS+QR RTNDD+DLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MGNMKTPTTKARVRKRVSDTDLTSSDQRKRTNDDLDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDD KKNEETISSVATEMRTMIE+VKSKLEKDRQNFAKALSKSSKECENCLKDETAKF+A
Sbjct: 61  KDDQKKNEETISSVATEMRTMIEQVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFRA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLF KYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFVKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFL+TGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLETGSDEDFPADD 216

[Close]

BLAST of MELO3C002599 vs. NCBI nr
Match: XP_011653172.1 (DNA ligase 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 205/216 (94.91%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           M NIKIPTAKTRSRKRVSDTDL+SS+QR +TNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MGNIKIPTAKTRSRKRVSDTDLSSSDQRKQTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKE      DETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKE------DETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 210

[Close]

BLAST of MELO3C002599 vs. ExPASy TrEMBL
Match: A0A5D3DS94 (DNA ligase 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00780 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.1e-106
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]

BLAST of MELO3C002599 vs. ExPASy TrEMBL
Match: A0A1S3B5C2 (DNA ligase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486349 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.1e-106
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]

BLAST of MELO3C002599 vs. ExPASy TrEMBL
Match: A0A0A0LRW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073820 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           M NIKIPTAKTRSRKRVSDTDL+SS+QR +TNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MGNIKIPTAKTRSRKRVSDTDLSSSDQRKQTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 216

[Close]

BLAST of MELO3C002599 vs. ExPASy TrEMBL
Match: A0A1S3B5U7 (DNA ligase 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486349 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.3e-100
Identity = 210/216 (97.22%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH
Sbjct: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKE      DETAKFQA
Sbjct: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKE------DETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD
Sbjct: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 210

[Close]

BLAST of MELO3C002599 vs. ExPASy TrEMBL
Match: A0A6J1KJH3 (DNA ligase 1 OS=Cucurbita maxima OX=3661 GN=LOC111495793 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.8e-96
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MVNIKIPTAKTRSRKRVSDTDLTSSEQRTRTNDDIDLDLDLSDDLKGIVSALNQIKERAH 60
           M N+KIP AKTR+RKRVSD DLTSS++R RTN+DIDLDLDLSDDLKGIVSALNQIKERA 
Sbjct: 1   MGNMKIPIAKTRTRKRVSDPDLTSSDKRKRTNEDIDLDLDLSDDLKGIVSALNQIKERAQ 60

Query: 61  KDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQNFAKALSKSSKECENCLKDETAKFQA 120
           KDD KKNEETISSV+TE+RTMIEEVKSK EKDRQ+FAKALSKSSKECENCLKDETAKFQA
Sbjct: 61  KDDQKKNEETISSVSTEIRTMIEEVKSKFEKDRQSFAKALSKSSKECENCLKDETAKFQA 120

Query: 121 LYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180
           LYEKFTKEKATHLQA+KDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE
Sbjct: 121 LYEKFTKEKATHLQAMKDTISKFEEEKERLFAKYEQLRKRERSLISEQEKACAEKIAQLE 180

Query: 181 ESLKRKKQDDKTFSLLRKTLGSFLDTGSDEDFPADD 217
           ESLKRKKQDD+TFSLLRKTLGSFL+TGSDEDFP DD
Sbjct: 181 ESLKRKKQDDRTFSLLRKTLGSFLETGSDEDFPTDD 216

[Close]

BLAST of MELO3C002599 vs. TAIR 10
Match: AT2G33793.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 124/182 (68.13%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 36  DLDLDLSDDLKGIVSALNQIKERAHKDDLKKNEETISSVATEMRTMIEEVKSKLEKDRQN 95
           +LD+D+S D KGI+SAL Q +E+AH+D  KK EE+ISSV+TE+++ I+E+KSKLEK+RQN
Sbjct: 31  ELDVDVSSDFKGIMSALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELKSKLEKERQN 90

Query: 96  FAKALSKSSKECENCLKDETAKFQALYEKFTKEKATHLQAIKDTISKFEEEKERLFAKYE 155
           F+KALSKSSKECEN LKDE AKF+ L++KF K+KA HLQ +KDTISKFEE+KERL+ +YE
Sbjct: 91  FSKALSKSSKECENILKDEAAKFEELHKKFVKDKADHLQGLKDTISKFEEDKERLYMRYE 150

Query: 156 QLRKRERSLISEQEKACAEKIAQLEESLKRKKQDDKTFSLLRKTLGSFLDT-GSDEDFPA 215
           QLRK+E+++I+EQEK C EK+AQLEESLK+KK+ DKTFS+LRKTLGSFL+   SDE+FP 
Sbjct: 151 QLRKKEKTMITEQEKFCTEKLAQLEESLKKKKRGDKTFSILRKTLGSFLENEASDEEFPP 210

Query: 216 DD 217
           D+
Sbjct: 211 DE 212

The following BLAST results are available for this feature:

BLAST of MELO3C002599 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C002599 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442500.1	1.1e-105	100.00	PREDICTED: DNA ligase 1 isoform X1 [Cucumis melo] >KAA0056986.1 DNA ligase 1 iso...	[more]
XP_004146600.1	6.4e-103	97.69	DNA ligase 1 isoform X1 [Cucumis sativus] >XP_031744624.1 DNA ligase 1 isoform X...	[more]
XP_008442507.1	1.9e-99	97.22	PREDICTED: DNA ligase 1 isoform X2 [Cucumis melo]	[more]
XP_038895277.1	1.6e-98	93.52	DNA ligase 1 isoform X1 [Benincasa hispida]	[more]
XP_011653172.1	1.2e-96	94.91	DNA ligase 1 isoform X2 [Cucumis sativus]	[more]

BLAST of MELO3C002599 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DS94	5.1e-106	100.00	DNA ligase 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B5C2	5.1e-106	100.00	DNA ligase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486349 PE=4 SV=1	[more]
A0A0A0LRW7	3.1e-103	97.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073820 PE=4 SV=1	[more]
A0A1S3B5U7	9.3e-100	97.22	DNA ligase 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486349 PE=4 SV=1	[more]
A0A6J1KJH3	4.8e-96	91.20	DNA ligase 1 OS=Cucurbita maxima OX=3661 GN=LOC111495793 PE=4 SV=1	[more]

BLAST of MELO3C002599 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33793.1	1.2e-62	68.13	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..102
None	No IPR available	COILS	Coil	Coil	coord: 169..189
None	No IPR available	COILS	Coil	Coil	coord: 133..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..33
None	No IPR available	PANTHER	PTHR35295:SF1	DNA LIGASE-LIKE PROTEIN	coord: 9..216
None	No IPR available	PANTHER	PTHR35295	DNA LIGASE-LIKE PROTEIN	coord: 9..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002599.1	MELO3C002599.1	mRNA