MELO3C002473.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002473.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RNA pseudouridine synthase 6, chloroplastic-like
Location	chr12: 23651751 .. 23656735 (-)
RNA-Seq Expression	MELO3C002473.jh1
Synteny	MELO3C002473.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCCAAAGACTCCAAAGGATGCTGGCTTCCATGAATATAGCTCTGGTGGCCACCCATGGTTGCCGTGGCCTCGGTAGTACATCACTATCCCTGCTGCGCACACTGGCAAGAACTCGTGCTAGTCCCAATGCTGCCAGTTGCTGCGATTACTTTGCTCCTCGGCGTTCTTTTAGTTCGATTAGCAGCGCATTCCCTTGTAAATCCTCAATAACAGATGTTACAGTCACAAAAACTGCAACTGATTCTGCAGAAAATGGGTGCCGCTAATTTTCTTTTTCTTATTATACCTTCTTGTTTATTAGTTTGATTGCTATTTATTTTTTTAATATAAGACGTTTGATTGCTAGTTTGAGCAGTTACGGTGTTGTTTAGCTGTGTATTAATGGCATAAATGTGACATAACTACTTACATGTTTAAATTGTTTGAATGTTTATTTAGTTGCTTGTGGGAAATTTCATAGTTGGTCAATTCCAAGATTTCTGGTTTATTTAAATCGTTGAATTGGGTTAGTATCTTGTTTTTCTTTGCGTATTGCTTTTCTTGTGGAAAAAGTTGCAGAATAAGAGCTAAAGTGGAAGGAAGAAGAAAAGAGAAAGGTTGTATTATATTTGGACTACAGACTTACAAGCGCTGAAAATTTGCATTAATTGACTTACTTGTTCGTAGGTCCAATTCAGTTTGCCTTCTGCTATCAGATAAAAGGGGAAAAAGGGGTTTCCTAGAACCACCAACCACCACAAACCAAAAGTTTAAGTTGATGAGTTGGAATAAATATTAATTGAAAGGAAACGACATTATAAGTTTAAATACAGAACTGACCTCCTACCTTGATAGTATGTTAAATCAAATCACCTTTCAACTAAGAAACTCAAGTTGAATGGTGATTGGGTTTTTTTCATTCTCCCAACCACTTGTATTGAATTCCCATTTTATGATTCTTTTGGGATTTAGCTTGCTGAGACTGAAATTAATTTCAGGTATCCTCAATATCATCGTTTGCTTCCATGCCCCTCATTTAGTAAACTTCCACGAGTTGAACATATGGTCGTTGTGGAAGCAGGACCTGTTATGGAATACATCTGTAAATCATTGGACCTTCCTCCTCTGTAAGTTATACTACTTTTTGTTGTTCATAATAATTTATTCTGCAACATAAGATCAACTCTAATTTGGATGAAGCAATGAATTCATGATTTCATTGTTTGAAGGTATGTTGCAGACCTTATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCTAAAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTCTTGAAAGGGCGAAAATCCATCAAAGGGAAAACTGTGAGAGAGGCACAGAAGACTTTCCGGATAACTCATGTTGATGAGTTTGTGGAAGTTGGAACGTACTTGCGTGTTCACGTGCATCCCAAACGCTTTCCAAGGTGGAATCAGCTACCTTTTTTTCTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTAATTTTATTTTAAAAAATCGATGTTCATAATGAAATTATGCTTGTTGACATTTACAATTAATCAGGTGCTATGACATTGATTGGAAATCAAGAATTATTGCTGTCACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTCTGTAGTTGAACACTTGAACTGTTCTCTCTGGCTTGAGAAATTATTTTCATTGCCTTCTATTTGTGGCAACTATTGACTTTTGCATTCTATCTTCCTGTGACATTCTGAAAATTTGATCAAGACTGACATGGGCACTAGGCATTTTGGTGGTCTGGATAAATTTACTGATCTTTCAGTAACATGCCACCTCTCAAGTAATAAAATTTGATGATGTAAACAATAAACCCATGCCACCACTCATTTGCATCGTTTTTTTTTTGTTAATAAAACAATTTATTTACATCAGTACCATCTAGCTGAACATTCACTTCTTAGGCTTTAAGTAAGACAAATATTCTGTCAGGTTGGAGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTGGGATTGACTTCTCCTTTGTGGACTACCCATCAGATCGACAACTGCACTGAAGGCTGGTAATGATGCTTCTTATATATGTTTCTATGTCTAATTCTAATTCCTCTATTCAAAAGACTTGTTTTCATTCATTTACACTTTTGCAGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGTAAGTTTCATGGTCTTATTTCTTGAGTTTGACCATTGCGGTTAGCTTACTTTACTAACTGGTAAAATTATTTCCAAGACAATGCTTAAAAGTGACAGCTCTATTCCCATAATGTAAAGTAAAACTATTTTTTTTAGCCATCTTTAAACCTCTGTTTATTTTCTCCTTTTCCATTATTTATTTGTGTTATAATTTGGATATGGTGTAGTAAAATATTCCTGCCAAATCTTCGTTATGCTCACTATACTGGTAAAATGTAAAAATGGTCGTATTATTCTCGCTCTAAATATAGTCTAATCTCTATGATAAAGATGTCTATCAAGGGAACAAGAATGTAAGCTAGTCCTTAGACTTTGCAGTTGAGATTGTCATTTTTAAGCACTTCACAACAAGGGGAAGTGAAAGATAAAGGAAGTAAAAATGAATTTTACTTGGCACGAGCTGATGAGTTATTTTATTTTCAGTGGCGTTGTTAGAATATCCATTAATCATTATACATATTTGGAATTTACTAGTTAAGTTATTTTTCTTGATGTTTTTCATCTCTTAATTTGATAGTAATGCTTTACAATTCTTCTTAATAGGAGAAAAGGGTTATGAAGCATTATCTTGCGCTTTCTGCTGCTCCCGTCCCAATGGGAATAATAACACACTACATGCGGCCAATTAATATAGCTCCCAGACTTGTTTCAAAAGGTAAGTCTCCCGATCAAGCATTCAAATTAATAATAAGTCTCCCGATCAAGCATTCAAATAATAATAAGCTATTGCCTTGAACTATTTGTTGCAATTTGATATGTTGAGGAACATATGCATACCGTTTAATTATTATTTTGCAGCCATAAACTCAAGCACTTAAAATACTAGTCTTAGCTTTTCTGCCAACTAATTATTAATATACAAATGGAAAGGTCATCCCAGTCATATTAGCATTTTAACTCCCACCCAACCTGGTACGTACAATCTCAACCCTAGCCACAAACATATCGTGTATCCATAATAAGTATTAGATAGTATATGATTTCATTCATAACCAATTGAAGTGATAGGAGTCTCATCTATTTTATAAGGAGTGTGAAGGCCTTTGATTTTATCAATGTGAGATTCTTTTGGGTTCACCATTTCTTTTTTATTAGACTGAATACCCGTTTGGGTTTTTGAGGCTCTTATACCATATTAGATAGTGCGGGGTTTCATTTCAAAACCGATTGGATTTAAGAAGTATGAGTTCCTTCGATCTTTCGAATGTGGGATTTCCAATTATAAGTCATGATTGGCAGAAGTTCTTTAGGTCGCTTTAAACTTCTTCTCCTTGCAGATTGTATTGATGGATGGATCCTTTGTCAGCTAGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATGTTGATATTGAAGCAAAATACTGCTTTGAAGATGGTGGATGGCCCTCCAAAAAGAAAGCTTATGAATGTAAAATAAACCTCTTGACTGGTCGGACACATCAGGTTCTTAGTGCAGTCATTCTGTTTTGTAGCTATCTGTATAATTTTGAAACCATCTTCACAAATACTTGCAGCCAGAGATGGGACATTGAAAACAGTTCTTAAAATGAATATGCTGTTTCCTGATGATGCAGATTCGAGCACAGCTGGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTATATGCCTGCTGTGGTTGCAGAGATGGGTAGTCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACCAGTGAAGAAGATAAAGAAACTGCAGTGGCAGAGTGGATTGCTCTTCATGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGAGGGAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAATTGTAGCTCGATGTTGACTCCAAACCATCATTTTGCATTAGCCAACATTCTCCAAATCTATAAGGTTATTTCAACTGCCCACTACACACACGGAAAAGAGTTGAGAAATATGCTCTTTATTTTGTTTTGCTCTAAAATCAAGTCTTTTGTTTACAAAGATACCAAAACCATCTACATCTATAACCAGCTTAGAAAGTTAATAACCGAAGCTAACAGCATTCAACTATTAAATCAGTCGTGTACAAGCAATTACATTGACAATTCTCATATAATATAGGGGCGCTGCTTGCTTAGATCACTTTCTTGGACATTGAACTGACGTTGTTGCTCATCAAAATTTGAGCAATGAAATTTTTGTACCAAAAGGTTGATAGCTTGGGTGTTCTCTTCAGAGTTGTATAGTCTACATGGCAAAGCCCAAACCTTTCAGTATATCCATTCATCCATTCAAAGTTATCCAGCAAAGACCAGGCAAAGTACCCTCTCACATCTGCTCCTTCTCTGAACATGCATCACATCATATACAATCAAGACAAGCTTCAACACAATCACCACTGCATAAAGCGAAACTCTTGCTTTCTATTGGACCATTGGATGTATGTTATTAGATAAATTCAAAATTTTCATTCTGTACGCCCAATGGATGTAATCAAGTTTGATGTTAAAGCATGAATTGGAAAGTATATAGTCTAGTGTTGTTCCTAAAGCATTATTTCTCTATGGAGTGGAACGCTGTAAATTTGGGTTCTTGTTTTCTTCATTTAATAATCTTTTTTTCTGGGGAAGCTAAATCCCCTTTTGCATGTCTCCTTAGAAA

mRNA sequence

AGCTCCAAAGACTCCAAAGGATGCTGGCTTCCATGAATATAGCTCTGGTGGCCACCCATGGTTGCCGTGGCCTCGGTAGTACATCACTATCCCTGCTGCGCACACTGGCAAGAACTCGTGCTAGTCCCAATGCTGCCAGTTGCTGCGATTACTTTGCTCCTCGGCGTTCTTTTAGTTCGATTAGCAGCGCATTCCCTTGTAAATCCTCAATAACAGATGTTACAGTCACAAAAACTGCAACTGATTCTGCAGAAAATGGGTATCCTCAATATCATCGTTTGCTTCCATGCCCCTCATTTAGTAAACTTCCACGAGTTGAACATATGGTCGTTGTGGAAGCAGGACCTGTTATGGAATACATCTGTAAATCATTGGACCTTCCTCCTCTGTATGTTGCAGACCTTATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCTAAAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTCTTGAAAGGGCGAAAATCCATCAAAGGGAAAACTGTGAGAGAGGCACAGAAGACTTTCCGGATAACTCATGTTGATGAGTTTGTGGAAGTTGGAACGTACTTGCGTGTTCACGTGCATCCCAAACGCTTTCCAAGGTGCTATGACATTGATTGGAAATCAAGAATTATTGCTGTCACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTGGGATTGACTTCTCCTTTGTGGACTACCCATCAGATCGACAACTGCACTGAAGGCTGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAGGGTTATGAAGCATTATCTTGCGCTTTCTGCTGCTCCCGTCCCAATGGGAATAATAACACACTACATGCGGCCAATTAATATAGCTCCCAGACTTGTTTCAAAAGATTGTATTGATGGATGGATCCTTTGTCAGCTAGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATGTTGATATTGAAGCAAAATACTGCTTTGAAGATGGTGGATGGCCCTCCAAAAAGAAAGCTTATGAATGTAAAATAAACCTCTTGACTGGTCGGACACATCAGATTCGAGCACAGCTGGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTATATGCCTGCTGTGGTTGCAGAGATGGGTAGTCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACCAGTGAAGAAGATAAAGAAACTGCAGTGGCAGAGTGGATTGCTCTTCATGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGAGGGAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAATTGTAGCTCGATGTTGACTCCAAACCATCATTTTGCATTAGCCAACATTCTCCAAATCTATAAGGTTATTTCAACTGCCCACTACACACACGGAAAAGAGTTGAGAAATATGCTCTTTATTTTGTTTTGCTCTAAAATCAAGTCTTTTGTTTACAAAGATACCAAAACCATCTACATCTATAACCAGCTTAGAAAGTTAATAACCGAAGCTAACAGCATTCAACTATTAAATCAGTCGTGTACAAGCAATTACATTGACAATTCTCATATAATATAGGGGCGCTGCTTGCTTAGATCACTTTCTTGGACATTGAACTGACGTTGTTGCTCATCAAAATTTGAGCAATGAAATTTTTGTACCAAAAGGTTGATAGCTTGGGTGTTCTCTTCAGAGTTGTATAGTCTACATGGCAAAGCCCAAACCTTTCAGTATATCCATTCATCCATTCAAAGTTATCCAGCAAAGACCAGGCAAAGTACCCTCTCACATCTGCTCCTTCTCTGAACATGCATCACATCATATACAATCAAGACAAGCTTCAACACAATCACCACTGCATAAAGCGAAACTCTTGCTTTCTATTGGACCATTGGATGTATGTTATTAGATAAATTCAAAATTTTCATTCTGTACGCCCAATGGATGTAATCAAGTTTGATGTTAAAGCATGAATTGGAAAGTATATAGTCTAGTGTTGTTCCTAAAGCATTATTTCTCTATGGAGTGGAACGCTGTAAATTTGGGTTCTTGTTTTCTTCATTTAATAATCTTTTTTTCTGGGGAAGCTAAATCCCCTTTTGCATGTCTCCTTAGAAA

Coding sequence (CDS)

ATGCTGGCTTCCATGAATATAGCTCTGGTGGCCACCCATGGTTGCCGTGGCCTCGGTAGTACATCACTATCCCTGCTGCGCACACTGGCAAGAACTCGTGCTAGTCCCAATGCTGCCAGTTGCTGCGATTACTTTGCTCCTCGGCGTTCTTTTAGTTCGATTAGCAGCGCATTCCCTTGTAAATCCTCAATAACAGATGTTACAGTCACAAAAACTGCAACTGATTCTGCAGAAAATGGGTATCCTCAATATCATCGTTTGCTTCCATGCCCCTCATTTAGTAAACTTCCACGAGTTGAACATATGGTCGTTGTGGAAGCAGGACCTGTTATGGAATACATCTGTAAATCATTGGACCTTCCTCCTCTGTATGTTGCAGACCTTATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCTAAAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTCTTGAAAGGGCGAAAATCCATCAAAGGGAAAACTGTGAGAGAGGCACAGAAGACTTTCCGGATAACTCATGTTGATGAGTTTGTGGAAGTTGGAACGTACTTGCGTGTTCACGTGCATCCCAAACGCTTTCCAAGGTGCTATGACATTGATTGGAAATCAAGAATTATTGCTGTCACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTGGGATTGACTTCTCCTTTGTGGACTACCCATCAGATCGACAACTGCACTGAAGGCTGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAGGGTTATGAAGCATTATCTTGCGCTTTCTGCTGCTCCCGTCCCAATGGGAATAATAACACACTACATGCGGCCAATTAATATAGCTCCCAGACTTGTTTCAAAAGATTGTATTGATGGATGGATCCTTTGTCAGCTAGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATGTTGATATTGAAGCAAAATACTGCTTTGAAGATGGTGGATGGCCCTCCAAAAAGAAAGCTTATGAATGTAAAATAAACCTCTTGACTGGTCGGACACATCAGATTCGAGCACAGCTGGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTATATGCCTGCTGTGGTTGCAGAGATGGGTAGTCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACCAGTGAAGAAGATAAAGAAACTGCAGTGGCAGAGTGGATTGCTCTTCATGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGAGGGAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAATTGTAG

Protein sequence

MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPCKSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL

Homology

[Close]

BLAST of MELO3C002473.jh1 vs. NCBI nr
Match: XP_008441255.1 (PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucumis melo] >KAA0056872.1 RNA pseudouridine synthase 6 [Cucumis melo var. makuwa] >TYJ99375.1 RNA pseudouridine synthase 6 [Cucumis melo var. makuwa])

HSP 1 Score: 988 bits (2553), Expect = 0.0
Identity = 478/480 (99.58%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASP+AASCCDYFAPRRSFSSISSAFPC
Sbjct: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVV+EAGPVMEYICKSLDL
Sbjct: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC
Sbjct: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
           FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF
Sbjct: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL
Sbjct: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]

BLAST of MELO3C002473.jh1 vs. NCBI nr
Match: XP_004151517.2 (RNA pseudouridine synthase 6, chloroplastic [Cucumis sativus] >XP_011652776.1 RNA pseudouridine synthase 6, chloroplastic [Cucumis sativus] >KGN64541.1 hypothetical protein Csa_013875 [Cucumis sativus])

HSP 1 Score: 914 bits (2362), Expect = 0.0
Identity = 450/480 (93.75%), Postives = 459/480 (95.62%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVATHGCR L STS SLLRTLAR RAS +AAS  DYFAPRRS  S SSAFPC
Sbjct: 1   MLASMNIALVATHGCRTLSSTSPSLLRTLARPRASLSAASSRDYFAPRRSLGSKSSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           KSSITDVTV KTAT+SAENGYPQYHRLLPCPSFSK PRVEHMVV+EAGPVMEYICKSL+L
Sbjct: 61  KSSITDVTV-KTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITHVDEFVEVGTYLRVHVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVI ARTKEYCSIFH KIREK+VMK Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWI+CQLEVLECREVSWPD DIEAKY 
Sbjct: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYR 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            ED GWPSKKKAYEC+INLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF
Sbjct: 361 VEDCGWPSKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEYT+EEDKETAVAEW ALHGKEPAVAIGLQAYEISWDSREH YNAGTPWWRQEQL
Sbjct: 421 GKCKKEYTNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWRQEQL 479

[Close]

BLAST of MELO3C002473.jh1 vs. NCBI nr
Match: XP_038894645.1 (RNA pseudouridine synthase 6, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 906 bits (2342), Expect = 0.0
Identity = 441/480 (91.88%), Postives = 459/480 (95.62%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALV++HGCRGL +TSLSLLRTLA TRASPNAASC +YFAPRRS SS SSAFP 
Sbjct: 1   MLASMNIALVSSHGCRGL-TTSLSLLRTLAATRASPNAASCGNYFAPRRSLSSKSSAFPR 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           +SSITDVTVTKTAT+SAENGYPQYHRLLPCP F++ PRVEHMVV+E GPVMEYICKSLDL
Sbjct: 61  ESSITDVTVTKTATNSAENGYPQYHRLLPCPLFNEPPRVEHMVVLEGGPVMEYICKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPP+TATPEQIRLFKKFTEPSFLKGR+SIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPQTATPEQIRLFKKFTEPSFLKGRRSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITH+DEFVEVGTYLRVHVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHIDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LAL+AAPVPMGIITHYMRPIN+APRLVSKDCIDGW LCQLEVLECREVSWPD DIEAKYC
Sbjct: 301 LALAAAPVPMGIITHYMRPINMAPRLVSKDCIDGWNLCQLEVLECREVSWPDADIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            ED GWP KKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPA VAEM SPGLNPF
Sbjct: 361 IEDCGWPLKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAAVAEMASPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEY SEEDK  AVAEWIALHGKEPAVAIGLQAYEISWDS +HIYNAGTPWW+QEQL
Sbjct: 421 GKCKKEYMSEEDKGIAVAEWIALHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKQEQL 479

[Close]

BLAST of MELO3C002473.jh1 vs. NCBI nr
Match: XP_038894646.1 (RNA pseudouridine synthase 6, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 871 bits (2251), Expect = 0.0
Identity = 427/463 (92.22%), Postives = 443/463 (95.68%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALV++HGCRGL +TSLSLLRTLA TRASPNAASC +YFAPRRS SS SSAFP 
Sbjct: 1   MLASMNIALVSSHGCRGL-TTSLSLLRTLAATRASPNAASCGNYFAPRRSLSSKSSAFPR 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           +SSITDVTVTKTAT+SAENGYPQYHRLLPCP F++ PRVEHMVV+E GPVMEYICKSLDL
Sbjct: 61  ESSITDVTVTKTATNSAENGYPQYHRLLPCPLFNEPPRVEHMVVLEGGPVMEYICKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPP+TATPEQIRLFKKFTEPSFLKGR+SIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPQTATPEQIRLFKKFTEPSFLKGRRSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITH+DEFVEVGTYLRVHVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHIDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LAL+AAPVPMGIITHYMRPIN+APRLVSKDCIDGW LCQLEVLECREVSWPD DIEAKYC
Sbjct: 301 LALAAAPVPMGIITHYMRPINMAPRLVSKDCIDGWNLCQLEVLECREVSWPDADIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            ED GWP KKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPA VAEM SPGLNPF
Sbjct: 361 IEDCGWPLKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAAVAEMASPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDS 463
           GKCKKEY SEEDK  AVAEWIALHGKEPAVAIGLQAYEISWDS
Sbjct: 421 GKCKKEYMSEEDKGIAVAEWIALHGKEPAVAIGLQAYEISWDS 462

[Close]

BLAST of MELO3C002473.jh1 vs. NCBI nr
Match: XP_022954964.1 (RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954965.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954966.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954967.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 865 bits (2236), Expect = 3.21e-315
Identity = 418/480 (87.08%), Postives = 448/480 (93.33%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVA +GCRGLG TSL+L RTLARTRA+ +A +C +YFA RRS SS SSAFPC
Sbjct: 1   MLASMNIALVAANGCRGLG-TSLALQRTLARTRANFSATACGNYFAARRSLSSKSSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           +SS+TDV VT++ T  AENGYPQYHRLLPCPSFS  PRVEH+VV+E GPVMEYI KSLDL
Sbjct: 61  ESSVTDVAVTQSTTTFAENGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYISKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPP TATPEQIRLFKKFT+PSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTQPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRIT +DEFVEVGTYLR+HVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCS+FHRKIREK+V K Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LAL+AAPVP+GIITHYMRPINIAPRLVS+DCIDG+ LCQLEVLECREV+WPD DIEAKYC
Sbjct: 301 LALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVAWPDADIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            E+ GWPSK KAYECKINLLTGRTHQIRAQLA+CGAPLVGDSMYMPA VAEM +PGLNPF
Sbjct: 361 IEECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEY SEEDKE+AV EWI+ HGKEPA+AIGLQAYEISWDS EHIYNAGTPWW+QEQL
Sbjct: 421 GKCKKEYASEEDKESAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy Swiss-Prot
Match: Q9SVS0 (RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g21770 PE=2 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 6.3e-178
Identity = 314/470 (66.81%), Postives = 367/470 (78.09%), Query Frame = 0


Query: 12  THGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPCKSSI-TDVTVT 71
           T G R L +  +SLLRTLA TR +       +  +PR  F S    F C S + TD    
Sbjct: 7   TGGYRNL-TAPVSLLRTLASTRVT-TPLFRSNKHSPR--FISSPKRFTCLSLLKTDSQNQ 66

Query: 72  KTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGP-VMEYICKSLDLPPLYVADLI 131
            T + S+ +GY +Y+RL+PCP+++  PR+EHMVV+E    V E+I K LDLPPLYVADLI
Sbjct: 67  TTLSSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLI 126

Query: 132 HFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDE 191
            FGAV+YALVCP+PP TATPE+I LF++ T PS LK R SIKGKTVREAQKTFR+TH ++
Sbjct: 127 RFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQ 186

Query: 192 FVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCAT 251
           + E GTYLRVHVHPKR PRCY+IDWKSRI+AVT+SYV+LDKPAGT+VGGTTDNIEESCAT
Sbjct: 187 YAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCAT 246

Query: 252 FATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAPVP 311
           FA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K V K Y AL+AAP+P
Sbjct: 247 FASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLP 306

Query: 312 MGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGGWPSK 371
           +GII+HYMRP N+APRLV++D I GW LCQLEVLEC+++ WPD   E K+  ED GW SK
Sbjct: 307 IGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSK 366

Query: 372 KKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTS 431
           + AYEC INLLTG+THQIRAQLA CGAPLVGDSMYMPA +AEMG+P  NP+GK KK YT 
Sbjct: 367 EFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTM 426

Query: 432 EED-KETAVAEWIALHGKEPAVAIGLQAYEISW--DSREHIYNAGTPWWR 477
           EE+ KETAVAEWI  HGKEP V IGLQA +ISW  D  EH Y AGTPWWR
Sbjct: 427 EENQKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy Swiss-Prot
Match: A3BN26 (RNA pseudouridine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0660400 PE=2 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 4.0e-156
Identity = 266/433 (61.43%), Postives = 322/433 (74.36%), Query Frame = 0


Query: 48  RRSFSSISSAFPCKSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEA 107
           RR  +++ S     S+    T   T    A   YP Y RLLPCP     PR+EH+V  E 
Sbjct: 38  RRHRAALHSPAAPLSAAAVSTSAATVEAPATAAYPVYGRLLPCPLQDDPPRIEHLVARED 97

Query: 108 GPVMEYICKSLDLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGR 167
              +++I +SL LPPLYVADLI FGAVYYALV PQPP  A PE +R+F++ TEPS L  R
Sbjct: 98  EVAVDFISRSLTLPPLYVADLIKFGAVYYALVAPQPPPHAAPEHVRIFREVTEPSVLCRR 157

Query: 168 KSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVV 227
           KSIKGKTVREAQKTFR+T  ++ +E GTYLRVHVHPKRFPRCY+IDWKSR+IAVT++YVV
Sbjct: 158 KSIKGKTVREAQKTFRVTDPNQRLEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDNYVV 217

Query: 228 LDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIF 287
           LDKPA TSVGG TDNIEESC  F +RALGL +PL TTHQIDNC+EGCV+L++TKE+CS+F
Sbjct: 218 LDKPAATSVGGATDNIEESCVVFTSRALGLETPLMTTHQIDNCSEGCVVLSKTKEFCSVF 277

Query: 288 HRKIREKRVMKHYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECRE 347
           H  IREK+V K YLAL+ APV  GIITHYMRPIN APRLVS+D I GW +CQ+E+L+C++
Sbjct: 278 HGMIREKQVNKRYLALTTAPVSTGIITHYMRPINRAPRLVSEDHIKGWHVCQMEILDCKK 337

Query: 348 VSWPDVDIEAKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPA 407
           V WP   I   +  ++ GWP ++ AYECKINLLTG+THQIRAQLA  G P+VGDS YM A
Sbjct: 338 VPWPSSLIRKVHKVDNCGWPQQEAAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAYMTA 397

Query: 408 VVAEMGSPGLNPFGKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWD--SRE 467
            +A + +P +NPFG+  + Y SE++K  AV  WI+ HGKEP   IGLQA EISWD     
Sbjct: 398 AMAAIVNPSINPFGRWGQNYDSEDEKAAAVEAWISCHGKEPKSVIGLQASEISWDYEGEH 457

Query: 468 HIYNAGTPWWRQE 479
           H Y AG PWWRQ+
Sbjct: 458 HSYKAGVPWWRQD 470

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy Swiss-Prot
Match: P75485 (Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) OX=272634 GN=MPN_292 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.2e-08
Identity = 65/246 (26.42%), Postives = 105/246 (42.68%), Query Frame = 0


Query: 166 GRKSIKGKTVRE----AQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAV 225
           G  S+ GK + +     Q   R+ HV+   E+   + V V P  FP    +D    I+  
Sbjct: 35  GLVSVNGKKITKNGWLVQPEDRV-HVNWSEELFEKVPVEVQPYDFP----LD----ILYE 94

Query: 226 TESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTK 285
            E  +V++KP G     T+ N  ES    A        P++  H++D  T G ++LA+ +
Sbjct: 95  DEQIMVVNKPNGLISHPTSFNESESLLGAALFHCN-HQPVFLVHRLDRDTSGVIMLAKNQ 154

Query: 286 EYCSIFHRKIREKRVMKHYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLE 345
                  ++++++ + ++YLAL   P+                     D + G I   LE
Sbjct: 155 SSLLHLQKQLQQRVMKRYYLALVHFPL---------------------DSLSGTISAPLE 214

Query: 346 VLECREVSWP--DVDIEAKYCF-EDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPL 405
            +   +V W   +   +AK  F +       +KA   K  LLTGRTHQIR  L     P+
Sbjct: 215 RVGNNKVMWKVGNSSNKAKNAFTKFTVLNQNEKAALIKCELLTGRTHQIRVHLQFIKHPV 249

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy Swiss-Prot
Match: Q8PHN2 (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rluD PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-07
Identity = 57/237 (24.05%), Postives = 90/237 (37.97%), Query Frame = 0


Query: 191 VEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSV---GGTTDNIEESC 250
           V+V    + H  P+  P          ++   E  +V+DKPAG  V    G  D    + 
Sbjct: 73  VQVVLETQTHAAPQDIP--------LSVLYEDEQVLVIDKPAGLVVHPGAGNPDRTLVNA 132

Query: 251 ATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAP 310
             F   AL         H++D  T G +++ART +  +    ++  + V + YLA+    
Sbjct: 133 LLFRDPALASVPRAGVVHRLDKDTSGVMVVARTVQAQTALVEQLSAREVHRQYLAVVVGA 192

Query: 311 VPMG------IITHYMRPINIAPRLVSKDCIDGWILCQL----EVLECREVSWPDVDIEA 370
           +  G      I  H    + +A R   +D +  + L +       LECR           
Sbjct: 193 LVSGGTANAPIDRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECR----------- 252

Query: 371 KYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGS 415
                                L TGRTHQIR  +A   +P+VGD +Y  A+    G+
Sbjct: 253 ---------------------LETGRTHQIRVHMAHLKSPIVGDPLYGGALKLPKGA 269

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy Swiss-Prot
Match: Q8P682 (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rluD PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-06
Identity = 55/237 (23.21%), Postives = 89/237 (37.55%), Query Frame = 0


Query: 191 VEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSV---GGTTDNIEESC 250
           V+V    + H  P+  P          ++   +  +V+DKPAG  V    G  D    + 
Sbjct: 73  VQVVLETQTHAAPQDIP--------LNVLYEDDHVLVIDKPAGLVVHPGAGNPDGTLVNA 132

Query: 251 ATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAP 310
             F    L         H++D  T G +++ART +  +    ++  + V + YLA+    
Sbjct: 133 LLFRDPNLAAVPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSARDVHRQYLAVVVGA 192

Query: 311 VPMG------IITHYMRPINIAPRLVSKDCIDGWILCQL----EVLECREVSWPDVDIEA 370
           +  G      I  H    + +A R   +D +  + L +       LECR           
Sbjct: 193 LVSGGTADAPIDRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECR----------- 252

Query: 371 KYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGS 415
                                L TGRTHQIR  +A   +P+VGD +Y  A+    G+
Sbjct: 253 ---------------------LETGRTHQIRVHMAHLKSPIVGDPLYGGALKLPKGA 269

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BM17 (RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005930 PE=4 SV=1)

HSP 1 Score: 988 bits (2553), Expect = 0.0
Identity = 478/480 (99.58%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASP+AASCCDYFAPRRSFSSISSAFPC
Sbjct: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVV+EAGPVMEYICKSLDL
Sbjct: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC
Sbjct: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
           FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF
Sbjct: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL
Sbjct: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B303 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990285 PE=4 SV=1)

HSP 1 Score: 988 bits (2553), Expect = 0.0
Identity = 478/480 (99.58%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASP+AASCCDYFAPRRSFSSISSAFPC
Sbjct: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVV+EAGPVMEYICKSLDL
Sbjct: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC
Sbjct: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
           FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF
Sbjct: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL
Sbjct: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LX47 (PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064140 PE=4 SV=1)

HSP 1 Score: 914 bits (2362), Expect = 0.0
Identity = 450/480 (93.75%), Postives = 459/480 (95.62%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVATHGCR L STS SLLRTLAR RAS +AAS  DYFAPRRS  S SSAFPC
Sbjct: 1   MLASMNIALVATHGCRTLSSTSPSLLRTLARPRASLSAASSRDYFAPRRSLGSKSSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           KSSITDVTV KTAT+SAENGYPQYHRLLPCPSFSK PRVEHMVV+EAGPVMEYICKSL+L
Sbjct: 61  KSSITDVTV-KTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITHVDEFVEVGTYLRVHVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVI ARTKEYCSIFH KIREK+VMK Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWI+CQLEVLECREVSWPD DIEAKY 
Sbjct: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYR 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            ED GWPSKKKAYEC+INLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF
Sbjct: 361 VEDCGWPSKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEYT+EEDKETAVAEW ALHGKEPAVAIGLQAYEISWDSREH YNAGTPWWRQEQL
Sbjct: 421 GKCKKEYTNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWRQEQL 479

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GUJ2 (RNA pseudouridine synthase 6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457066 PE=4 SV=1)

HSP 1 Score: 865 bits (2236), Expect = 1.55e-315
Identity = 418/480 (87.08%), Postives = 448/480 (93.33%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVA +GCRGLG TSL+L RTLARTRA+ +A +C +YFA RRS SS SSAFPC
Sbjct: 1   MLASMNIALVAANGCRGLG-TSLALQRTLARTRANFSATACGNYFAARRSLSSKSSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           +SS+TDV VT++ T  AENGYPQYHRLLPCPSFS  PRVEH+VV+E GPVMEYI KSLDL
Sbjct: 61  ESSVTDVAVTQSTTTFAENGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYISKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPP TATPEQIRLFKKFT+PSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTQPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRIT +DEFVEVGTYLR+HVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCS+FHRKIREK+V K Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LAL+AAPVP+GIITHYMRPINIAPRLVS+DCIDG+ LCQLEVLECREV+WPD DIEAKYC
Sbjct: 301 LALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVAWPDADIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            E+ GWPSK KAYECKINLLTGRTHQIRAQLA+CGAPLVGDSMYMPA VAEM +PGLNPF
Sbjct: 361 IEECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLNPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEY SEEDKE+AV EWI+ HGKEPA+AIGLQAYEISWDS EHIYNAGTPWW+QEQL
Sbjct: 421 GKCKKEYASEEDKESAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]

BLAST of MELO3C002473.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JVD9 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490064 PE=4 SV=1)

HSP 1 Score: 862 bits (2227), Expect = 2.87e-314
Identity = 419/480 (87.29%), Postives = 446/480 (92.92%), Query Frame = 0


Query: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPC 60
           MLASMNIALVA +GCRGL STSL+L RTLARTRA+ +A  C +YFA RRS SS SSAFPC
Sbjct: 1   MLASMNIALVAANGCRGL-STSLALQRTLARTRANFSATVCGNYFAARRSLSSKSSAFPC 60

Query: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGPVMEYICKSLDL 120
           +SS+TDV VT+TAT  AE+GYPQYHRLLPCPSFS  PRVEH+VV+E GPVMEYI KSLDL
Sbjct: 61  ESSVTDVAVTQTATTFAESGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYIAKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPP TATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRIT +DEFVEVGTYLR+HVHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300
           DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCS+FHRKIREK+V K Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLY 300

Query: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360
           LAL+AAPVP+GIITHYMRPINIAPRLVS+DCIDG+ LCQLEVLECREVSWP  DIEAKYC
Sbjct: 301 LALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVSWPGADIEAKYC 360

Query: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420
            E+ GWPSK KAYECKINLLTGRTHQIRAQLA+CGAPLVGDSMYMPA VAEM +PGL+PF
Sbjct: 361 IEECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLSPF 420

Query: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480
           GKCKKEY SEEDKE AV EWI+ HGKEPA+AIGLQAYEISWDS EHIYNAGTPWW+QEQL
Sbjct: 421 GKCKKEYASEEDKEIAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]

BLAST of MELO3C002473.jh1 vs. TAIR 10
Match: AT4G21770.1 (Pseudouridine synthase family protein )

HSP 1 Score: 625.2 bits (1611), Expect = 4.5e-179
Identity = 314/470 (66.81%), Postives = 367/470 (78.09%), Query Frame = 0


Query: 12  THGCRGLGSTSLSLLRTLARTRASPNAASCCDYFAPRRSFSSISSAFPCKSSI-TDVTVT 71
           T G R L +  +SLLRTLA TR +       +  +PR  F S    F C S + TD    
Sbjct: 7   TGGYRNL-TAPVSLLRTLASTRVT-TPLFRSNKHSPR--FISSPKRFTCLSLLKTDSQNQ 66

Query: 72  KTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVVEAGP-VMEYICKSLDLPPLYVADLI 131
            T + S+ +GY +Y+RL+PCP+++  PR+EHMVV+E    V E+I K LDLPPLYVADLI
Sbjct: 67  TTLSSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLI 126

Query: 132 HFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDE 191
            FGAV+YALVCP+PP TATPE+I LF++ T PS LK R SIKGKTVREAQKTFR+TH ++
Sbjct: 127 RFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQ 186

Query: 192 FVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCAT 251
           + E GTYLRVHVHPKR PRCY+IDWKSRI+AVT+SYV+LDKPAGT+VGGTTDNIEESCAT
Sbjct: 187 YAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCAT 246

Query: 252 FATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAPVP 311
           FA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K V K Y AL+AAP+P
Sbjct: 247 FASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLP 306

Query: 312 MGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGGWPSK 371
           +GII+HYMRP N+APRLV++D I GW LCQLEVLEC+++ WPD   E K+  ED GW SK
Sbjct: 307 IGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSK 366

Query: 372 KKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTS 431
           + AYEC INLLTG+THQIRAQLA CGAPLVGDSMYMPA +AEMG+P  NP+GK KK YT 
Sbjct: 367 EFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTM 426

Query: 432 EED-KETAVAEWIALHGKEPAVAIGLQAYEISW--DSREHIYNAGTPWWR 477
           EE+ KETAVAEWI  HGKEP V IGLQA +ISW  D  EH Y AGTPWWR
Sbjct: 427 EENQKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

The following BLAST results are available for this feature:

BLAST of MELO3C002473.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441255.1	0.0	99.58	PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucumis ...	[more]
XP_004151517.2	0.0	93.75	RNA pseudouridine synthase 6, chloroplastic [Cucumis sativus] >XP_011652776.1 RN...	[more]
XP_038894645.1	0.0	91.88	RNA pseudouridine synthase 6, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038894646.1	0.0	92.22	RNA pseudouridine synthase 6, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_022954964.1	3.21e-315	87.08	RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954...	[more]

BLAST of MELO3C002473.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVS0	6.3e-178	66.81	RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
A3BN26	4.0e-156	61.43	RNA pseudouridine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]
P75485	6.2e-08	26.42	Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumonia...	[more]
Q8PHN2	2.3e-07	24.05	Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. c...	[more]
Q8P682	3.4e-06	23.21	Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. c...	[more]

BLAST of MELO3C002473.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BM17	0.0	99.58	RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3B303	0.0	99.58	RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucumis melo OX=3...	[more]
A0A0A0LX47	0.0	93.75	PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G06...	[more]
A0A6J1GUJ2	1.55e-315	87.08	RNA pseudouridine synthase 6, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JVD9	2.87e-314	87.29	RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita maxima ...	[more]

BLAST of MELO3C002473.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21770.1	4.5e-179	66.81	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.2350.10	Pseudouridine synthase	coord: 124..378 e-value: 8.9E-27 score: 96.1
None	No IPR available	PANTHER	PTHR21600:SF52	RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTIC	coord: 35..388
None	No IPR available	PANTHER	PTHR21600	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	coord: 35..388
IPR006145	Pseudouridine synthase, RsuA/RluA-like	PFAM	PF00849	PseudoU_synth_2	coord: 138..305 e-value: 2.3E-22 score: 79.8
IPR006145	Pseudouridine synthase, RsuA/RluA-like	CDD	cd02869	PseudoU_synth_RluA_like	coord: 138..330 e-value: 8.1929E-33 score: 119.75
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 123..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002473.jh1.t1	MELO3C002473.jh1.t1	mRNA
MELO3C002473.jh1.t3	MELO3C002473.jh1.t3	mRNA
MELO3C002473.jh1.t2	MELO3C002473.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding