MELO3C002469 (gene) Melon (DHL92) v4

Overview
NameMELO3C002469
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPatatin
Locationchr12: 22439204 .. 22440175 (+)
RNA-Seq ExpressionMELO3C002469
SyntenyMELO3C002469
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTATCATAATATCGTCGGGGACAGGAAAACACTGGGATGCTTCTTCGCAGCATTCACATTCAGAATGAAATATTATATAAAAATCTCAAGCTGATGCTGCTCTCTATCTCTTCCAAAGCACTTTACTTCAACAGACGGCTTTATGAAAAGATCAAAATAAAGGAGTTGGCTTAGACTCAAAGCAAACAAATCACAACCCCTTTAGGAAAAAGGACCCTACAACATCTCCCATCCTTCATCCCAAAACCTTCTTTCCATTTCTTCAATTTTACAACATCAAAACGAATGCAACATAATAAACCCAACAACACATTCTACAAATCCCATTACGGAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCGCTCATAAAGAAGGAAATCGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCTTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTATAATGTCATGGCGAAGGAAGAAGAAGCTAACCAGCAATCGCTTCATTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGCATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACGTGTAGATGGTGATGGATGTTTCATGATTCTCAGAATATGTATCATGGGGTCAGGATCTGCAAGAGAAGCTAACAAGCAGCTTCTCTTAAATGTAAGTTGTTCGATGTTGTTGATGCTTTATATGGTTTGTGTTTCCAAATTCTATAAAGGAAACTTCCTAGGGTTTCCATTCAGATGATGGGCCACAGAGAAAGGGAACCATTTAGCTGTTTCAAGTTTCAATCATCAAGGTACAATCCAGTTTAGGAGAAAATATTCAATTGTATGGAAGTACTGTGGCTCTTCAGATGTTTCTCCTTGCAGGTAC

mRNA sequence

GGTATCATAATATCGTCGGGGACAGGAAAACACTGGGATGCTTCTTCGCAGCATTCACATTCAGAATGAAATATTATATAAAAATCTCAAGCTGATGCTGCTCTCTATCTCTTCCAAAGCACTTTACTTCAACAGACGGCTTTATGAAAAGATCAAAATAAAGGAGTTGGCTTAGACTCAAAGCAAACAAATCACAACCCCTTTAGGAAAAAGGACCCTACAACATCTCCCATCCTTCATCCCAAAACCTTCTTTCCATTTCTTCAATTTTACAACATCAAAACGAATGCAACATAATAAACCCAACAACACATTCTACAAATCCCATTACGGAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCGCTCATAAAGAAGGAAATCGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCTTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTATAATGTCATGGCGAAGGAAGAAGAAGCTAACCAGCAATCGCTTCATTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGCATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACGTGTAGATGGTGATGGATGTTTCATGATTCTCAGAATATGTATCATGGGGTCAGGATCTGCAAGAGAAGCTAACAAGCAGCTTCTCTTAAATGTAAGTTGTTCGATGTTGTTGATGCTTTATATGGTTTGTGTTTCCAAATTCTATAAAGGAAACTTCCTAGGGTTTCCATTCAGATGATGGGCCACAGAGAAAGGGAACCATTTAGCTGTTTCAAGTTTCAATCATCAAGGTACAATCCAGTTTAGGAGAAAATATTCAATTGTATGGAAGTACTGTGGCTCTTCAGATGTTTCTCCTTGCAGGTAC

Coding sequence (CDS)

ATGCAACATAATAAACCCAACAACACATTCTACAAATCCCATTACGGAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCGCTCATAAAGAAGGAAATCGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCTTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTATAATGTCATGGCGAAGGAAGAAGAAGCTAACCAGCAATCGCTTCATTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGCATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACGTGTAG

Protein sequence

MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV
Homology
BLAST of MELO3C002469 vs. NCBI nr
Match: KAA0056869.1 (hypothetical protein E6C27_scaffold96G00380 [Cucumis melo var. makuwa] >TYJ99372.1 hypothetical protein E5676_scaffold248G005900 [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 7.7e-56
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE 60
           MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE
Sbjct: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE 60

Query: 61  MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGL 114
           MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISG+
Sbjct: 61  MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGI 113

BLAST of MELO3C002469 vs. NCBI nr
Match: XP_016898893.1 (PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 17  MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 76
           MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS
Sbjct: 1   MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 60

Query: 77  IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 128
           IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV
Sbjct: 61  IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 111

BLAST of MELO3C002469 vs. NCBI nr
Match: KGN64543.2 (hypothetical protein Csa_013063 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0

Query: 17  MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 76
           MAA APVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS
Sbjct: 1   MAAIAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 60

Query: 77  IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 128
           +MSWRRK KLTSNRF+TKMCSTFDASRSNRMNKISGLSYTILQNDFHSLH+
Sbjct: 61  LMSWRRKTKLTSNRFVTKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHM 111

BLAST of MELO3C002469 vs. NCBI nr
Match: XP_011648422.1 (uncharacterized protein LOC105434455 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0

Query: 17  MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 76
           MAA APVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS
Sbjct: 1   MAAIAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 60

Query: 77  IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 128
           +MSWRRK KLTSNRF+TKMCSTFDASRSNRMNKISGLSYTILQNDFHSLH+
Sbjct: 61  LMSWRRKTKLTSNRFVTKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHM 111

BLAST of MELO3C002469 vs. NCBI nr
Match: KAG7019678.1 (hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-44
Identity = 96/130 (73.85%), Postives = 110/130 (84.62%), Query Frame = 0

Query: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELE--TSISSQRSQG 60
           MQHNKP+ TF KSH  MAATA VAIGTRGTIGSLIKKEIDYFAKIELE  +S SSQR Q 
Sbjct: 1   MQHNKPSTTFCKSHEKMAATASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSSQRPQA 60

Query: 61  PEMASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCST-FDASRSNRMNKISGLSYTI 120
           P+MA+SGC S PPTFW S+MSWRRKKK + +RF+ K+CS+ FD S SN+MNKISG +YTI
Sbjct: 61  PDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGFNYTI 120

Query: 121 LQNDFHSLHV 128
           LQN+FHSLH+
Sbjct: 121 LQNNFHSLHM 130

BLAST of MELO3C002469 vs. ExPASy TrEMBL
Match: A0A0A0LX43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.5e-62
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0

Query: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE 60
           MQHNKP NTFYKSHYGMAA APVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQGPE
Sbjct: 1   MQHNKPTNTFYKSHYGMAAIAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGPE 60

Query: 61  MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQN 120
           MASSGCRSSPPTFWQS+MSWRRK KLTSNRF+TKMCSTFDASRSNRMNKISGLSYTILQN
Sbjct: 61  MASSGCRSSPPTFWQSLMSWRRKTKLTSNRFVTKMCSTFDASRSNRMNKISGLSYTILQN 120

Query: 121 DFHSLHV 128
           DFHSLH+
Sbjct: 121 DFHSLHM 127

BLAST of MELO3C002469 vs. ExPASy TrEMBL
Match: A0A5A7UTL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005900 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE 60
           MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE
Sbjct: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE 60

Query: 61  MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGL 114
           MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISG+
Sbjct: 61  MASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGI 113

BLAST of MELO3C002469 vs. ExPASy TrEMBL
Match: A0A1S4DSE9 (uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 17  MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 76
           MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS
Sbjct: 1   MAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQS 60

Query: 77  IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 128
           IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV
Sbjct: 61  IMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 111

BLAST of MELO3C002469 vs. ExPASy TrEMBL
Match: A0A6J1CHB1 (uncharacterized protein LOC111010862 OS=Momordica charantia OX=3673 GN=LOC111010862 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.4e-39
Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 0

Query: 1   MQHNKPNNTFYKSHYGMAATAPVAIGTRGTIGSLIKKEIDYFAKIELETSISSQRSQGPE 60
           MQH+KP+ TF K    MAATAPVAIGTRGT+GSL+KKEIDYFAKIE E      R  G +
Sbjct: 1   MQHSKPSTTFCKFLEEMAATAPVAIGTRGTVGSLVKKEIDYFAKIEFE------RCSGND 60

Query: 61  MASSGCR-SSPPTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQ 120
           MASS  R SSPPTFW ++MSWRRKKK   NRFITK+CS FD S SNR+NKISG +YTILQ
Sbjct: 61  MASSSRRSSSPPTFWHTVMSWRRKKKRIGNRFITKICSAFDVSGSNRLNKISGFNYTILQ 120

Query: 121 NDFHSLHV 128
           NDF+SLH+
Sbjct: 121 NDFNSLHM 122

BLAST of MELO3C002469 vs. ExPASy TrEMBL
Match: A0A314Z3X1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_12060 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21
Identity = 58/117 (49.57%), Postives = 86/117 (73.50%), Query Frame = 0

Query: 17  MAATAPVAIGTRGTIGSLIKKEIDYFAKIELET---SISSQRSQGP--EMASSGC-RSSP 76
           MAA AP+AIGTRGT+GSL++KEI+YF+K+EL+    S SS++ QG   +M SS C  SS 
Sbjct: 19  MAAPAPIAIGTRGTVGSLVRKEIEYFSKLELDRLRGSSSSRKPQGQIVDMTSSSCTHSSK 78

Query: 77  PTFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 128
           P+FW  IM+W+RKK+ +S RF++ +CS    + +NR+N I G +Y IL++D ++L +
Sbjct: 79  PSFWFLIMTWKRKKRRSSRRFLSSICSATKVAETNRLNCIPGFNYRILKDDMNNLSI 135

BLAST of MELO3C002469 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 42/109 (38.53%), Postives = 56/109 (51.38%), Query Frame = 0

Query: 21  APVAIGTRGTIGSLIKKEIDYFAKIE-LETSISSQRSQGPEMASS----GCRSSPPTFWQ 80
           AP+AIGTRGTIGSL++KEIDYF            +R    E  ++       SS    W 
Sbjct: 3   APIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGSWF 62

Query: 81  SIMSWRRKKKLT---SNRFITKMCSTFDASRSNRMNKISGLSYTILQND 122
           S   WR+KK+ T     +F   MCS  + S  NR   + G +Y IL++D
Sbjct: 63  SKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENR---VPGFNYRILKSD 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0056869.17.7e-5699.12hypothetical protein E6C27_scaffold96G00380 [Cucumis melo var. makuwa] >TYJ99372... [more]
XP_016898893.11.2e-53100.00PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo][more]
KGN64543.22.0e-5194.59hypothetical protein Csa_013063 [Cucumis sativus][more]
XP_011648422.12.0e-5194.59uncharacterized protein LOC105434455 [Cucumis sativus][more]
KAG7019678.16.7e-4473.85hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A0A0LX434.5e-6294.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1[more]
A0A5A7UTL13.7e-5699.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DSE95.9e-54100.00uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=... [more]
A0A6J1CHB15.4e-3969.53uncharacterized protein LOC111010862 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A314Z3X11.0e-2149.57Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_120... [more]
Match NameE-valueIdentityDescription
AT4G21780.11.8e-1038.53unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35131:SF1EXPRESSED PROTEINcoord: 3..126
NoneNo IPR availablePANTHERPTHR35131EXPRESSED PROTEINcoord: 3..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002469.1MELO3C002469.1mRNA