MELO3C002435.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002435.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrovirus-related Pol polyprotein from transposon RE2
Location	chr12: 23904959 .. 23907037 (+)
RNA-Seq Expression	MELO3C002435.jh1
Synteny	MELO3C002435.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTTTCCCTAAATTTCCTTTATCATTATTGCTTTTATTTAATTCATTGTTTTTATCTTTGTCATCATGAACACAAGCATTGGCTTGATCTGAGAAATTACCCTTTTTGTTTCCCATCTTAAATCCCCAAAGTCAAGTTCTCACATCACATCAGACAGAAAGATAAAGGTTGCAAATCGAAATATGGAATCGAGAGGGATTCTTAGTCCGAGGAGATCCAACCCCAATAGGACGCCACCTGCCCATCTTCCTGGCAGCACATCTGCCCCTGAATTAACCATTCAGTCAGCAATTCCCAGTACCACATCCAATCGGCGCACAACTAAGAAAGGCAAAGCAGTTGGGTGTGGCTCTCGTAAGGATGGTTCGGGTTTGAGTCATAAAAAGTTTTCTGATTATTCTCCAAATCATTCTCCCAGCCCTGCCAGAACTCGTGATCTTCAACAACTTTCTATTCACGACGGTGAGCTTTTACATATATTACTTCAAACATTTTTTTTTAAAAAAATTCATAGATCTACGGCAAACACGAAGTTAGAAAGTTTAGTTTAGATCTCATTCATCAAAAACCGGAAAGCCTAGTTGGATGAAAGTTTCGTAACCATTTCAATTTTTTGTTTTTCTTTCTAATTTTTCAATTTTTGTTTATTAGAAAAAAAAACATATATGTTTGATAAGTTAGTTTAGTAGAATATATTCTTTTGAAACTATATTCTTTTCATTTTCAATTTTTCTCAATAAATTTTAAAAACAAGTTTCTTAATTAAAAAATTAAAAAAGAATTAATTAGTTCAATCAAAAACAGAAATATAAAAGTATTACCAAACAAGCTCTTCATTTTTAGTTTTATGTTTTTTATATTTATATTTTTTTGTTATCCTATTCTTTATTTGGGTTATTGTAACGTTTGAATTAAAGTAGAATAACTTAGATCACATCTAAATCATACCAGAGATTACAACTCTATAGAAAGTCTTATCAAAATAATAGCTTCTAGTTATATCAAATAAGATGCATTTTTTTATGACTTAGCACACTAAAGTGTGTTTGACTTTGATTAATCCTATGTGCAGTGATGTTTTTAATTATTATTATTATTACTTAATTATGAGCAAGAAGCTTAATTTCAAACTATCAACATTTAGCATGGTCTGAACTTTTTTAGTTTTTAGAACTTAGTGTGGATTTTTAAAATCATGGCAAAGAAATCATTGTATAAGAAAACAAAGATAACCCTTCAAAAACGAAAAACTAAAAATCAATTGTTTATCAAATGAGGCCTGATTTATTAGTTCAGATCATATCTGATGGCTATTTTGTTTATTTATGGTTTAAATTTTTTAAATTTGTGTTTATTGATTCTCACAAATTCTTATTTTCTTAACTTTTACTCTCAATTTGTTTATCAGATACAAATGAACAAAATAATCCTGAAAGCAATACTCCAATATTATCTAAAATTTACAAAGAGATTGCATTTCATCGTCAAGGAAAGACATCCATTAAAACTTACTACGAAAATCTCAAGGCATTATGGAATGAAGCAGCTTCTTCAACCTGTACTAATTCGCCTCAATCTTCCTCCAATATTGCAATTGTTGATCACATTGAGCTCATGGAAAGAGATAAACTAATGCTATTTCTTCTGGGACTAAAGGATTCGTATTCCTCACTTTGCTCCCAATTCCTTCTTAAGCCATCTCAAACGGTGGACGAAGCTTATTCTACAATAATTAGAGAAAAAAAAGGAAGGAAATGCAGCACTTCCAAAAAAGAGGCAAAGTACTAGTGAAAAAACATTTGGTTTCATTTTTTCAGAAGCAACCTTTCTTCAACAGTTGTGATACTTATGCATTTTTTTTAATAGTTTACATCCTTATATGTTTCATCGTTTCTCCTTTAACATTTGAGTCCAAAAGCGATGCCTTTAAATAAACAAAGAGTACACCCTTTGCGCTCAATTATATTAGAAAGCTTTCCTATAATTAACCTGTCCCTGCTTTTATTGTTTGTTCTCAAGTTTCTCTCTAGCTCCTTTGTACTATCTGATTTCATCAATACAATGCTTTTGGATGATG

mRNA sequence

CTCCTTTCCCTAAATTTCCTTTATCATTATTGCTTTTATTTAATTCATTGTTTTTATCTTTGTCATCATGAACACAAGCATTGGCTTGATCTGAGAAATTACCCTTTTTGTTTCCCATCTTAAATCCCCAAAGTCAAGTTCTCACATCACATCAGACAGAAAGATAAAGGTTGCAAATCGAAATATGGAATCGAGAGGGATTCTTAGTCCGAGGAGATCCAACCCCAATAGGACGCCACCTGCCCATCTTCCTGGCAGCACATCTGCCCCTGAATTAACCATTCAGTCAGCAATTCCCAGTACCACATCCAATCGGCGCACAACTAAGAAAGGCAAAGCAGTTGGGTGTGGCTCTCGTAAGGATGGTTCGGGTTTGAGTCATAAAAAGTTTTCTGATTATTCTCCAAATCATTCTCCCAGCCCTGCCAGAACTCGTGATCTTCAACAACTTTCTATTCACGACGATACAAATGAACAAAATAATCCTGAAAGCAATACTCCAATATTATCTAAAATTTACAAAGAGATTGCATTTCATCGTCAAGGAAAGACATCCATTAAAACTTACTACGAAAATCTCAAGGCATTATGGAATGAAGCAGCTTCTTCAACCTGTACTAATTCGCCTCAATCTTCCTCCAATATTGCAATTGTTGATCACATTGAGCTCATGGAAAGAGATAAACTAATGCTATTTCTTCTGGGACTAAAGGATTCGTATTCCTCACTTTGCTCCCAATTCCTTCTTAAGCCATCTCAAACGGTGGACGAAGCTTATTCTACAATAATTAGAGAAAAAAAAGGAAGGAAATGCAGCACTTCCAAAAAAGAGGCAAAGTACTAGTGAAAAAACATTTGGTTTCATTTTTTCAGAAGCAACCTTTCTTCAACAGTTGTGATACTTATGCATTTTTTTTAATAGTTTACATCCTTATATGTTTCATCGTTTCTCCTTTAACATTTGAGTCCAAAAGCGATGCCTTTAAATAAACAAAGAGTACACCCTTTGCGCTCAATTATATTAGAAAGCTTTCCTATAATTAACCTGTCCCTGCTTTTATTGTTTGTTCTCAAGTTTCTCTCTAGCTCCTTTGTACTATCTGATTTCATCAATACAATGCTTTTGGATGATG

Coding sequence (CDS)

ATGGAATCGAGAGGGATTCTTAGTCCGAGGAGATCCAACCCCAATAGGACGCCACCTGCCCATCTTCCTGGCAGCACATCTGCCCCTGAATTAACCATTCAGTCAGCAATTCCCAGTACCACATCCAATCGGCGCACAACTAAGAAAGGCAAAGCAGTTGGGTGTGGCTCTCGTAAGGATGGTTCGGGTTTGAGTCATAAAAAGTTTTCTGATTATTCTCCAAATCATTCTCCCAGCCCTGCCAGAACTCGTGATCTTCAACAACTTTCTATTCACGACGATACAAATGAACAAAATAATCCTGAAAGCAATACTCCAATATTATCTAAAATTTACAAAGAGATTGCATTTCATCGTCAAGGAAAGACATCCATTAAAACTTACTACGAAAATCTCAAGGCATTATGGAATGAAGCAGCTTCTTCAACCTGTACTAATTCGCCTCAATCTTCCTCCAATATTGCAATTGTTGATCACATTGAGCTCATGGAAAGAGATAAACTAATGCTATTTCTTCTGGGACTAAAGGATTCGTATTCCTCACTTTGCTCCCAATTCCTTCTTAAGCCATCTCAAACGGTGGACGAAGCTTATTCTACAATAATTAGAGAAAAAAAAGGAAGGAAATGCAGCACTTCCAAAAAAGAGGCAAAGTACTAG

Protein sequence

MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY

Homology

[Close]

BLAST of MELO3C002435.jh1 vs. NCBI nr
Match: KAA0056834.1 (uncharacterized protein E6C27_scaffold96G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 422 bits (1084), Expect = 1.60e-148
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60
           MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIP TTSNRRTTKKGKAVGCGSRKD
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKD 60

Query: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120
           GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ
Sbjct: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120

Query: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180
           GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS
Sbjct: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180

Query: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219
           SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY
Sbjct: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219

[Close]

BLAST of MELO3C002435.jh1 vs. NCBI nr
Match: XP_008440818.1 (PREDICTED: uncharacterized protein LOC103485124 [Cucumis melo] >TYJ99335.1 uncharacterized protein E5676_scaffold248G005510 [Cucumis melo var. makuwa])

HSP 1 Score: 422 bits (1084), Expect = 1.60e-148
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60
           MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60

Query: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120
           GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ
Sbjct: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120

Query: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180
           GKTSIKTYYENLK LWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS
Sbjct: 121 GKTSIKTYYENLKQLWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180

Query: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219
           SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY
Sbjct: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219

[Close]

BLAST of MELO3C002435.jh1 vs. NCBI nr
Match: XP_004154160.1 (uncharacterized protein LOC101211799 [Cucumis sativus] >KAE8652656.1 hypothetical protein Csa_013260 [Cucumis sativus])

HSP 1 Score: 254 bits (648), Expect = 1.56e-81
Identity = 163/258 (63.18%), Postives = 181/258 (70.16%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTK----------KG 60
           ME RGI+SPRRS P +TPPAHLPGSTSAPELTIQS IPSTTSNRRTTK          KG
Sbjct: 1   MEPRGIISPRRSKPKKTPPAHLPGSTSAPELTIQSEIPSTTSNRRTTKSASQPSPSTKKG 60

Query: 61  KAVGCGSRKDGSGL--SHKKFSDYSPNHSPSPARTRD------LQQLSIHD--------- 120
           KA G GSRKDGSG   SHKK SDYSPNHSPSPA+TRD      LQQLSIHD         
Sbjct: 61  KAGGSGSRKDGSGSGSSHKKNSDYSPNHSPSPAKTRDHLLQSPLQQLSIHDVNDVANNVH 120

Query: 121 -----------DT--NEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEA 180
                      DT   +Q+N ESN   +L KIY  IA HRQG TSIK+Y++NLKALW+EA
Sbjct: 121 QSRSIHKTVSSDTIIEQQHNSESNAATMLFKIYGVIASHRQGNTSIKSYFKNLKALWDEA 180

Query: 181 ASSTC-TNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLL-KPSQTVDEA 215
           A+S+  TNSPQSSSN   V+   LMER+KLM FLLGL DSYSSLCSQ LL +PS TVD+A
Sbjct: 181 AASSIHTNSPQSSSNNTTVEQSGLMEREKLMQFLLGLNDSYSSLCSQILLERPSPTVDQA 240

[Close]

BLAST of MELO3C002435.jh1 vs. NCBI nr
Match: XP_011652556.2 (uncharacterized protein LOC105435030 [Cucumis sativus] >KAE8652654.1 hypothetical protein Csa_014113 [Cucumis sativus])

HSP 1 Score: 199 bits (506), Expect = 4.00e-60
Identity = 137/256 (53.52%), Postives = 160/256 (62.50%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTK----------KG 60
           M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + 
Sbjct: 1   MTSRGFLSPRRSNPRKTPPDHLSGTISAPESTIHLATP--TSHQHLTKAATQPISLQTRK 60

Query: 61  KAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------ 120
           K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH            
Sbjct: 61  KKAGIATPKDGS--SHHKFSD-SPNHSPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQ 120

Query: 121 ----------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAAS 180
                     D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLKALWNEAA+
Sbjct: 121 SRSIHKSVSSDTIIEQHNSESNSPTMLLKIYELIASHRQGNTSIKSYFRNLKALWNEAAA 180

Query: 181 STCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYS 215
           S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS
Sbjct: 181 SSINLNSPQSSSNNAIEERSEFMEREKLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYS 240

[Close]

BLAST of MELO3C002435.jh1 vs. NCBI nr
Match: XP_038893970.1 (uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida])

HSP 1 Score: 144 bits (362), Expect = 9.39e-39
Identity = 113/259 (43.63%), Postives = 135/259 (52.12%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTP------------------------PAHLPG------------ 60
           M +RG LSPRRS P  T                         P+  P             
Sbjct: 1   MATRGFLSPRRSRPGATEQGGSDERKNQYKMNHRSSTISSLNPSKSPSTENLQQEVAASN 60

Query: 61  ------STSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSP 120
                 S SAPE  + SA P+ T  RRTTKKGK      + DG    HK           
Sbjct: 61  KKGIFSSKSAPESALNSATPAPT--RRTTKKGKV-----KDDGGKSIHK----------- 120

Query: 121 SPARTRDLQQLSIHDDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWN 180
                      S+  DT +Q N +SN P IL KIY+EIA HR G ++IK+Y+ NLKALW+
Sbjct: 121 -----------SVSSDTIDQYNSQSNAPTILCKIYEEIASHRHGNSTIKSYFRNLKALWD 180

Query: 181 EAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLL-KPSQTVDE 215
           EAA+ T   +P SS  I  V+  ELMER+KLM FLLGL DSYSSLCSQ LL +PS TVD+
Sbjct: 181 EAAAPT---NPSSSDQI--VEQTELMEREKLMQFLLGLNDSYSSLCSQILLVRPSPTVDQ 225

[Close]

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UNP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00010 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 7.77e-149
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60
           MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIP TTSNRRTTKKGKAVGCGSRKD
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKD 60

Query: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120
           GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ
Sbjct: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120

Query: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180
           GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS
Sbjct: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180

Query: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219
           SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY
Sbjct: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219

[Close]

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BLX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005510 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 7.77e-149
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60
           MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60

Query: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120
           GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ
Sbjct: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120

Query: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180
           GKTSIKTYYENLK LWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS
Sbjct: 121 GKTSIKTYYENLKQLWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180

Query: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219
           SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY
Sbjct: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219

[Close]

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B205 (uncharacterized protein LOC103485124 OS=Cucumis melo OX=3656 GN=LOC103485124 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 7.77e-149
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60
           MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD
Sbjct: 1   MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPSTTSNRRTTKKGKAVGCGSRKD 60

Query: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120
           GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ
Sbjct: 61  GSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSKIYKEIAFHRQ 120

Query: 121 GKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180
           GKTSIKTYYENLK LWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS
Sbjct: 121 GKTSIKTYYENLKQLWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYS 180

Query: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219
           SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY
Sbjct: 181 SLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY 219

[Close]

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LRX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059720 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 7.02e-46
Identity = 118/230 (51.30%), Postives = 140/230 (60.87%), Query Frame = 0


Query: 27  SAPELTIQSAIPSTTSNRRTTK----------KGKAVGCGSRKDGSGLSHKKFSDYSPNH 86
           SAPE TI  A P  TS++  TK          + K  G  + KDGS  SH KFSD SPNH
Sbjct: 10  SAPESTIHLATP--TSHQHLTKAATQPISLQTRKKKAGIATPKDGS--SHHKFSD-SPNH 69

Query: 87  SPSPARTRD------LQQLSIH----------------------DDTNEQNNPESNTP-I 146
           SPSP +T D      L  LSIH                      D   EQ+N ESN+P +
Sbjct: 70  SPSPVKTADHLLQNQLHHLSIHEVNDVVANNVHQSRSIHKSVSSDTIIEQHNSESNSPTM 129

Query: 147 LSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCT-NSPQSSSNIAIVDHIELMERD 206
           L KIY+ IA HR+G TSIK+Y+ NLKALWNEAA+S+   NSPQSSSN AI +  E MER+
Sbjct: 130 LLKIYELIASHRKGNTSIKSYFRNLKALWNEAAASSINLNSPQSSSNNAIEERSEFMERE 189

Query: 207 KLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYSTIIREKKGRKCSTSKK 215
           KLM FLLGL DSYS LCSQ L ++PS TVD+AYS I+ E+K RK   +KK
Sbjct: 190 KLMQFLLGLNDSYSLLCSQILAVRPSPTVDQAYSLIVGEQKTRKSKMTKK 234

[Close]

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BHR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005340 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.95e-20
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 102 ESNTPI-LSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHI 161
           +SN PI L KIY+EIAFHRQG +SI +Y+  LK LW++ A +    +PQ SS+ AI    
Sbjct: 188 QSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD-AINMLS 247

Query: 162 ELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYSTIIREKKGRK 209
           E MER+K++ FL+GL DSYSS CS+ L ++P  TVD A+S IIR++  RK
Sbjct: 248 EHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRK 296

The following BLAST results are available for this feature:

BLAST of MELO3C002435.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056834.1	1.60e-148	99.54	uncharacterized protein E6C27_scaffold96G00010 [Cucumis melo var. makuwa]	[more]
XP_008440818.1	1.60e-148	99.54	PREDICTED: uncharacterized protein LOC103485124 [Cucumis melo] >TYJ99335.1 uncha...	[more]
XP_004154160.1	1.56e-81	63.18	uncharacterized protein LOC101211799 [Cucumis sativus] >KAE8652656.1 hypothetica...	[more]
XP_011652556.2	4.00e-60	53.52	uncharacterized protein LOC105435030 [Cucumis sativus] >KAE8652654.1 hypothetica...	[more]
XP_038893970.1	9.39e-39	43.63	uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C002435.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNP6	7.77e-149	99.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BLX6	7.77e-149	99.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B205	7.77e-149	99.54	uncharacterized protein LOC103485124 OS=Cucumis melo OX=3656 GN=LOC103485124 PE=...	[more]
A0A0A0LRX9	7.02e-46	51.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059720 PE=4 SV=1	[more]
A0A5D3BHR0	4.95e-20	52.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C002435.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..82
None	No IPR available	PANTHER	PTHR34222:SF6	OS02G0671800 PROTEIN	coord: 99..209
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 99..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002435.jh1.t1	MELO3C002435.jh1.t1	mRNA