MELO3C002420.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002420.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	serine/arginine repetitive matrix protein 1-like
Location	chr12: 24009125 .. 24010051 (-)
RNA-Seq Expression	MELO3C002420.jh1
Synteny	MELO3C002420.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAAATAAGTGGAATTATGCTTCCCCGAAGATCCCACTGGTCCAGAGGCCGAAAGGGACATGAGACGACAGCAGCGCCACCCGATCCGGAGGAGCAACAACAACGTCTAGAAGAAATGACACCCGAAATAGCATCCAATTTAGAACAAAGAAATAATCTTTGTTACGAAATAATGCCGGAAATAAGAGGAATTATGCCTCCCAGAATATCCCACTGGTCTAGAAGCCGAAAGGGACATGAGACGACAGCACCACCCGATCCGGAGGAGCAACAACGTCAAAGAGGAAACGACACCGAAATAGCAACCAGCTTAAAACAAAGAAATGACCTTAGTTCTTCAGGTTCTTCAGGTATCTGCTTCCCAGAACCCGATTTAAAGATCATCCCAACCTCAGGCCATGAAACAAAACAACCCCCGAATCCAGACACTAAAATTCAAACCCCCACAAAAACAACTTCACCTCCGCCTTCAAGAAGCAATTTAAAAGCTGGGTTGAACTTAACTAAACATGTTGGTTCTCCAAATGGTTCTCCCAAACAAAAATTTGGTTCTTCTCAAAGCAACGCTCCAATAATATTACATAAAATTTACAGGGAAATTGCATTTCATCGTCAAGGTAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGAATTATGGGATCAACTTGCAAAAGCCTACAATGATTTGGCGCCTCAATATTCATCTGATGCAATTAATATGCAGAGTGAGCATATGGAAAGGGAAAAGGTAATCCAATTTCTTGTTGGATTAAATGATTCTTATTCCTCCACCTGTTCTAAAATACTTTTTATGAGGCCATTTCCTACCGTGGATACGGCTTTTTCTGTAATAATTCGTAAAGAGAACCGTAGGAAATTAGTAGCTTTGTCACAGTATAATGATGAGGAAAATGAT

mRNA sequence

ATGACGGAAATAAGTGGAATTATGCTTCCCCGAAGATCCCACTGGTCCAGAGGCCGAAAGGGACATGAGACGACAGCAGCGCCACCCGATCCGGAGGAGCAACAACAACGTCTAGAAGAAATGACACCCGAAATAGCATCCAATTTAGAACAAAGAAATAATCTTTGTTACGAAATAATGCCGGAAATAAGAGGAATTATGCCTCCCAGAATATCCCACTGGTCTAGAAGCCGAAAGGGACATGAGACGACAGCACCACCCGATCCGGAGGAGCAACAACGTCAAAGAGGAAACGACACCGAAATAGCAACCAGCTTAAAACAAAGAAATGACCTTAGTTCTTCAGGTTCTTCAGGTATCTGCTTCCCAGAACCCGATTTAAAGATCATCCCAACCTCAGGCCATGAAACAAAACAACCCCCGAATCCAGACACTAAAATTCAAACCCCCACAAAAACAACTTCACCTCCGCCTTCAAGAAGCAATTTAAAAGCTGGGTTGAACTTAACTAAACATGTTGGTTCTCCAAATGGTTCTCCCAAACAAAAATTTGGTTCTTCTCAAAGCAACGCTCCAATAATATTACATAAAATTTACAGGGAAATTGCATTTCATCGTCAAGGTAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGAATTATGGGATCAACTTGCAAAAGCCTACAATGATTTGGCGCCTCAATATTCATCTGATGCAATTAATATGCAGAGTGAGCATATGGAAAGGGAAAAGGTAATCCAATTTCTTGTTGGATTAAATGATTCTTATTCCTCCACCTGTTCTAAAATACTTTTTATGAGGCCATTTCCTACCGTGGATACGGCTTTTTCTGTAATAATTCGTAAAGAGAACCGTAGGAAATTAGTAGCTTTGTCACAGTATAATGATGAGGAAAATGAT

Coding sequence (CDS)

ATGACGGAAATAAGTGGAATTATGCTTCCCCGAAGATCCCACTGGTCCAGAGGCCGAAAGGGACATGAGACGACAGCAGCGCCACCCGATCCGGAGGAGCAACAACAACGTCTAGAAGAAATGACACCCGAAATAGCATCCAATTTAGAACAAAGAAATAATCTTTGTTACGAAATAATGCCGGAAATAAGAGGAATTATGCCTCCCAGAATATCCCACTGGTCTAGAAGCCGAAAGGGACATGAGACGACAGCACCACCCGATCCGGAGGAGCAACAACGTCAAAGAGGAAACGACACCGAAATAGCAACCAGCTTAAAACAAAGAAATGACCTTAGTTCTTCAGGTTCTTCAGGTATCTGCTTCCCAGAACCCGATTTAAAGATCATCCCAACCTCAGGCCATGAAACAAAACAACCCCCGAATCCAGACACTAAAATTCAAACCCCCACAAAAACAACTTCACCTCCGCCTTCAAGAAGCAATTTAAAAGCTGGGTTGAACTTAACTAAACATGTTGGTTCTCCAAATGGTTCTCCCAAACAAAAATTTGGTTCTTCTCAAAGCAACGCTCCAATAATATTACATAAAATTTACAGGGAAATTGCATTTCATCGTCAAGGTAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGAATTATGGGATCAACTTGCAAAAGCCTACAATGATTTGGCGCCTCAATATTCATCTGATGCAATTAATATGCAGAGTGAGCATATGGAAAGGGAAAAGGTAATCCAATTTCTTGTTGGATTAAATGATTCTTATTCCTCCACCTGTTCTAAAATACTTTTTATGAGGCCATTTCCTACCGTGGATACGGCTTTTTCTGTAATAATTCGTAAAGAGAACCGTAGGAAATTAGTAGCTTTGTCACAGTATAATGATGAGGAAAATGAT

Protein sequence

MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIMPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGICFPEPDLKIIPTSGHETKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSPKQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVALSQYNDEEND

Homology

[Close]

BLAST of MELO3C002420.jh1 vs. NCBI nr
Match: TYJ99320.1 (hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa])

HSP 1 Score: 609 bits (1571), Expect = 9.56e-220
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60
           MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM
Sbjct: 1   MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60

Query: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120
           PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI
Sbjct: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120

Query: 121 CFPEPDLKIIPTSGHETKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180
           CFPEPDLKIIPTSGH+TKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP
Sbjct: 121 CFPEPDLKIIPTSGHQTKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180

Query: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240
           KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD
Sbjct: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240

Query: 241 AINMQSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVAL 300
           AINM SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVAL
Sbjct: 241 AINMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVAL 300

Query: 301 SQYNDEEND 309
           SQYNDEEND
Sbjct: 301 SQYNDEEND 309

[Close]

BLAST of MELO3C002420.jh1 vs. NCBI nr
Match: KAA0055390.1 (uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa])

HSP 1 Score: 504 bits (1297), Expect = 4.85e-178
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60
           MTEI GIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM
Sbjct: 1   MTEIRGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60

Query: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120
           PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI
Sbjct: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120

Query: 121 CFPEPDLKIIPTSGHETKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180
           CFPEPDLKIIPTSGH+TKQPPNPD KIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP
Sbjct: 121 CFPEPDLKIIPTSGHQTKQPPNPDAKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180

Query: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240
           KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD
Sbjct: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240

Query: 241 AINMQSEHMEREKVIQFLVGLNDS 264
           AINM SEHMEREK++  +   NDS
Sbjct: 241 AINMLSEHMEREKIMGVITDNNDS 264

[Close]

BLAST of MELO3C002420.jh1 vs. NCBI nr
Match: XP_038893970.1 (uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida])

HSP 1 Score: 131 bits (329), Expect = 1.03e-32
Identity = 69/111 (62.16%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 186 SSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQ 245
           +SQSNAP IL KIY EIA HR GNS+I SYF  LK LWD+ A   N      SSD I  Q
Sbjct: 113 NSQSNAPTILCKIYEEIASHRHGNSTIKSYFRNLKALWDEAAAPTNPS----SSDQIVEQ 172

Query: 246 SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRK 296
           +E MEREK++QFL+GLNDSYSS CS+IL +RP PTVD A+S+I+R+E  RK
Sbjct: 173 TELMEREKLMQFLLGLNDSYSSLCSQILLVRPSPTVDQAYSLIVREEKTRK 219

[Close]

BLAST of MELO3C002420.jh1 vs. NCBI nr
Match: XP_022137506.1 (uncharacterized protein LOC111008934 isoform X2 [Momordica charantia])

HSP 1 Score: 130 bits (328), Expect = 1.34e-31
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 186 SSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQ 245
           SSQSN P I  +IY++IA HRQGNSSITSYFT+LK LWD+L + YNDL+   SS      
Sbjct: 220 SSQSNVPRIF-EIYKDIASHRQGNSSITSYFTRLKTLWDEL-ETYNDLSQCCSS------ 279

Query: 246 SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENR 294
            EH+EREKV+QFLVGLND YS+ C +IL +RPFPTV+ A+S++IR+E R
Sbjct: 280 GEHVEREKVMQFLVGLNDPYSTICHQILLIRPFPTVEKAYSIVIREEKR 320

[Close]

BLAST of MELO3C002420.jh1 vs. NCBI nr
Match: XP_022137505.1 (uncharacterized protein LOC111008934 isoform X1 [Momordica charantia])

HSP 1 Score: 130 bits (328), Expect = 1.61e-31
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 186 SSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQ 245
           SSQSN P I  +IY++IA HRQGNSSITSYFT+LK LWD+L + YNDL+   SS      
Sbjct: 229 SSQSNVPRIF-EIYKDIASHRQGNSSITSYFTRLKTLWDEL-ETYNDLSQCCSS------ 288

Query: 246 SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENR 294
            EH+EREKV+QFLVGLND YS+ C +IL +RPFPTV+ A+S++IR+E R
Sbjct: 289 GEHVEREKVMQFLVGLNDPYSTICHQILLIRPFPTVEKAYSIVIREEKR 329

[Close]

BLAST of MELO3C002420.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BHR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005340 PE=4 SV=1)

HSP 1 Score: 609 bits (1571), Expect = 4.63e-220
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60
           MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM
Sbjct: 1   MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60

Query: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120
           PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI
Sbjct: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120

Query: 121 CFPEPDLKIIPTSGHETKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180
           CFPEPDLKIIPTSGH+TKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP
Sbjct: 121 CFPEPDLKIIPTSGHQTKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180

Query: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240
           KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD
Sbjct: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240

Query: 241 AINMQSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVAL 300
           AINM SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVAL
Sbjct: 241 AINMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLVAL 300

Query: 301 SQYNDEEND 309
           SQYNDEEND
Sbjct: 301 SQYNDEEND 309

[Close]

BLAST of MELO3C002420.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UJM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002350 PE=4 SV=1)

HSP 1 Score: 504 bits (1297), Expect = 2.35e-178
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MTEISGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60
           MTEI GIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM
Sbjct: 1   MTEIRGIMLPRRSHWSRGRKGHETTAAPPDPEEQQQRLEEMTPEIASNLEQRNNLCYEIM 60

Query: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120
           PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI
Sbjct: 61  PEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSGI 120

Query: 121 CFPEPDLKIIPTSGHETKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180
           CFPEPDLKIIPTSGH+TKQPPNPD KIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP
Sbjct: 121 CFPEPDLKIIPTSGHQTKQPPNPDAKIQTPTKTTSPPPSRSNLKAGLNLTKHVGSPNGSP 180

Query: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240
           KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD
Sbjct: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240

Query: 241 AINMQSEHMEREKVIQFLVGLNDS 264
           AINM SEHMEREK++  +   NDS
Sbjct: 241 AINMLSEHMEREKIMGVITDNNDS 264

[Close]

BLAST of MELO3C002420.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C6T8 (uncharacterized protein LOC111008934 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008934 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 6.48e-32
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 186 SSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQ 245
           SSQSN P I  +IY++IA HRQGNSSITSYFT+LK LWD+L + YNDL+   SS      
Sbjct: 220 SSQSNVPRIF-EIYKDIASHRQGNSSITSYFTRLKTLWDEL-ETYNDLSQCCSS------ 279

Query: 246 SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENR 294
            EH+EREKV+QFLVGLND YS+ C +IL +RPFPTV+ A+S++IR+E R
Sbjct: 280 GEHVEREKVMQFLVGLNDPYSTICHQILLIRPFPTVEKAYSIVIREEKR 320

[Close]

BLAST of MELO3C002420.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C6U3 (uncharacterized protein LOC111008934 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008934 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 7.81e-32
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 186 SSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQ 245
           SSQSN P I  +IY++IA HRQGNSSITSYFT+LK LWD+L + YNDL+   SS      
Sbjct: 229 SSQSNVPRIF-EIYKDIASHRQGNSSITSYFTRLKTLWDEL-ETYNDLSQCCSS------ 288

Query: 246 SEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENR 294
            EH+EREKV+QFLVGLND YS+ C +IL +RPFPTV+ A+S++IR+E R
Sbjct: 289 GEHVEREKVMQFLVGLNDPYSTICHQILLIRPFPTVEKAYSIVIREEKR 329

[Close]

BLAST of MELO3C002420.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 7.59e-31
Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 181 KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSD 240
           K++  SSQ N    + +IY+EIA H QGNSSITSY TKLK LWD+L +AY D  P+ S  
Sbjct: 224 KEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDEL-EAYID-TPKCSCG 283

Query: 241 AINMQSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRKLV 298
           +   QSE +EREKV+QFL+GLNDSYS+ C++IL M+PFPTV+ A   I+R+E RR+LV
Sbjct: 284 STEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREEKRRELV 339

[Close]

BLAST of MELO3C002420.jh1 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-07
Identity = 32/109 (29.36%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 195 LHKIYREIAFHRQGNSSITSYFTKLKELWDQLAKAYNDLAPQYSSDAINMQ-----SEHM 254
           ++++ R +A  RQG  S+  YF KL ++W +L++ Y  + P+      N +      E  
Sbjct: 127 IYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSE-YAPI-PECKCGGCNCECTKRAEEAR 186

Query: 255 EREKVIQFLVG--LNDSYSSTCSKILFMRPFPTVDTAFSVIIRKENRRK 297
           E+E+  +FL+G  LN  + +  +KI+F +P P++  AF+++   E+  K
Sbjct: 187 EKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAESMMK 233

The following BLAST results are available for this feature:

BLAST of MELO3C002420.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99320.1	9.56e-220	99.35	hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa]	[more]
KAA0055390.1	4.85e-178	95.45	uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa]	[more]
XP_038893970.1	1.03e-32	62.16	uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida]	[more]
XP_022137506.1	1.34e-31	62.39	uncharacterized protein LOC111008934 isoform X2 [Momordica charantia]	[more]
XP_022137505.1	1.61e-31	62.39	uncharacterized protein LOC111008934 isoform X1 [Momordica charantia]	[more]

BLAST of MELO3C002420.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C002420.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHR0	4.63e-220	99.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UJM8	2.35e-178	95.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1C6T8	6.48e-32	62.39	uncharacterized protein LOC111008934 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C6U3	7.81e-32	62.39	uncharacterized protein LOC111008934 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GTG4	7.59e-31	57.63	serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of MELO3C002420.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21280.1	5.9e-07	29.36	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..39
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 187..296
None	No IPR available	PANTHER	PTHR34222:SF6	OS02G0671800 PROTEIN	coord: 187..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002420.jh1.t1	MELO3C002420.jh1.t1	mRNA