MELO3C002341 (gene) Melon (DHL92) v4

Overview
NameMELO3C002341
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 23352324 .. 23352918 (+)
RNA-Seq ExpressionMELO3C002341
SyntenyMELO3C002341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAGAAAAAGAAGAAAAAATGGTGTCTAAAGTGGAAGAAACACTGAGGAGGAAGTACCAGCAAGTTCAGCCTCCGCAGACGGCGGTGTCAGCGGTGGCAGCGGCGACGACGACGGCGACGACGAAGCAAATCCAATGCAATAAAACCAAATATCCGAAATTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCCTGATTTTAGAGACGGAGCCGCCATCCGCGATATGGAGGAGGGATTAGCTGTTGTTCTCTCGACGCCGGTCGTCGAAGGCCACTTCCGGTAGCTAATTATGAGTACAGAATATTAATGGTCGCCTTAGTTTTTCTCTGATTTAGGAGTGATTTATTAGATTGCTAAGATATATATTCTTTGTTTTTATTTTGCCCCTAATTAGTTTTTCTTTTTCGCGTTATTAATTATGTACCTTTTTGAAAATTATTTCTCAATATAAATATATTTTCTTTTCTGTTTAATATTTATTTTGTTGCATTTTTTATATATCAGAGATTAATATATGAAAATTTATTGAGGATGGCTTTTA

mRNA sequence

AAAAAAAAAGAAAAAGAAGAAAAAATGGTGTCTAAAGTGGAAGAAACACTGAGGAGGAAGTACCAGCAAGTTCAGCCTCCGCAGACGGCGGTGTCAGCGGTGGCAGCGGCGACGACGACGGCGACGACGAAGCAAATCCAATGCAATAAAACCAAATATCCGAAATTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCCTGATTTTAGAGACGGAGCCGCCATCCGCGATATGGAGGAGGGATTAGCTGTTGTTCTCTCGACGCCGGTCGTCGAAGGCCACTTCCGGTAGCTAATTATGAGTACAGAATATTAATGGTCGCCTTAGTTTTTCTCTGATTTAGGAGTGATTTATTAGATTGCTAAGATATATATTCTTTGTTTTTATTTTGCCCCTAATTAGTTTTTCTTTTTCGCGTTATTAATTATGTACCTTTTTGAAAATTATTTCTCAATATAAATATATTTTCTTTTCTGTTTAATATTTATTTTGTTGCATTTTTTATATATCAGAGATTAATATATGAAAATTTATTGAGGATGGCTTTTA

Coding sequence (CDS)

ATGGTGTCTAAAGTGGAAGAAACACTGAGGAGGAAGTACCAGCAAGTTCAGCCTCCGCAGACGGCGGTGTCAGCGGTGGCAGCGGCGACGACGACGGCGACGACGAAGCAAATCCAATGCAATAAAACCAAATATCCGAAATTCAAGAGAAGTAGCTCCAATGTTGAAGAAGATGGCGCCTCTTCCGCCATGCTTTTGCTTGCTTGCATTGCTTTTGCCTCCTGA

Protein sequence

MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGASSAMLLLACIAFAS
Homology
BLAST of MELO3C002341 vs. NCBI nr
Match: KGN64384.1 (hypothetical protein Csa_013100 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEETLRRKYQQV PPQTAV+AVAAA   AT KQIQCNK KYPKFKRSSSNVEEDGA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAA---ATAKQIQCNKAKYPKFKRSSSNVEEDGA 60

Query: 61 SSAMLLLACIAFAS 75
          SSAMLLLACIAFAS
Sbjct: 61 SSAMLLLACIAFAS 71

BLAST of MELO3C002341 vs. NCBI nr
Match: KAG6584135.1 (hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019725.1 hypothetical protein SDJN02_18688, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 58/73 (79.45%), Postives = 59/73 (80.82%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEETLR K+QQVQPPQ       AA   AT KQIQCNK KYPKFKRS SNVEEDGA
Sbjct: 1  MVSKVEETLRMKHQQVQPPQ-------AAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGA 60

Query: 61 SSAMLLLACIAFA 74
          SSAMLLLACIAFA
Sbjct: 61 SSAMLLLACIAFA 66

BLAST of MELO3C002341 vs. NCBI nr
Match: KAG7012298.1 (hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.7 bits (208), Expect = 3.6e-13
Identity = 50/73 (68.49%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE LRRK QQVQ P  A  A A        KQIQ NK KYPKFKRSSS+V +DGA
Sbjct: 1  MVSKVEEALRRKQQQVQTPHAAAGAAA--------KQIQFNKAKYPKFKRSSSDVGDDGA 60

Query: 61 SSAMLLLACIAFA 74
          SSA+LLLACIAF+
Sbjct: 61 SSAILLLACIAFS 65

BLAST of MELO3C002341 vs. NCBI nr
Match: GFZ03822.1 (hypothetical protein Acr_16g0004460 [Actinidia rufa])

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE ++++ QQ Q  Q               KQ+QCNK K  KFKRSSSN+EEDGA
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQ--------------QKQMQCNKGKASKFKRSSSNLEEDGA 59

Query: 61 SSAMLLLACIAFA 74
          SSA+LLLACIAFA
Sbjct: 61 SSAILLLACIAFA 59

BLAST of MELO3C002341 vs. NCBI nr
Match: QCD80969.1 (hypothetical protein DEO72_LG2g1293 [Vigna unguiculata])

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08
Identity = 44/73 (60.27%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE ++RK Q  Q  Q     V         KQIQCNK K  KFKRSSSN+EEDGA
Sbjct: 1  MVSKVEEAMKRKKQMQQEGQNQQQQV--------QKQIQCNKGKAGKFKRSSSNLEEDGA 60

Query: 61 SSAMLLLACIAFA 74
          SSA+L LACIA A
Sbjct: 61 SSAILFLACIACA 65

BLAST of MELO3C002341 vs. ExPASy TrEMBL
Match: A0A0A0LTS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-24
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEETLRRKYQQV PPQTAV+AVAAA   AT KQIQCNK KYPKFKRSSSNVEEDGA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAA---ATAKQIQCNKAKYPKFKRSSSNVEEDGA 60

Query: 61 SSAMLLLACIAFAS 75
          SSAMLLLACIAFAS
Sbjct: 61 SSAMLLLACIAFAS 71

BLAST of MELO3C002341 vs. ExPASy TrEMBL
Match: A0A7J0FYN8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE ++++ QQ Q  Q               KQ+QCNK K  KFKRSSSN+EEDGA
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQ--------------QKQMQCNKGKASKFKRSSSNLEEDGA 59

Query: 61 SSAMLLLACIAFA 74
          SSA+LLLACIAFA
Sbjct: 61 SSAILLLACIAFA 59

BLAST of MELO3C002341 vs. ExPASy TrEMBL
Match: A0A4D6KYW9 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1293 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.5e-09
Identity = 44/73 (60.27%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE ++RK Q  Q  Q     V         KQIQCNK K  KFKRSSSN+EEDGA
Sbjct: 1  MVSKVEEAMKRKKQMQQEGQNQQQQV--------QKQIQCNKGKAGKFKRSSSNLEEDGA 60

Query: 61 SSAMLLLACIAFA 74
          SSA+L LACIA A
Sbjct: 61 SSAILFLACIACA 65

BLAST of MELO3C002341 vs. ExPASy TrEMBL
Match: A0A061FZA4 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014581 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-08
Identity = 43/71 (60.56%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE ++R   Q Q  Q +             KQIQCNK K PKFKRSSSN+EEDGA
Sbjct: 1  MVSKVEEAMKR---QQQSQQHSHKGRDHCHQQQLQKQIQCNKGKTPKFKRSSSNLEEDGA 60

Query: 61 SSAMLLLACIA 72
          SSA+LLLACIA
Sbjct: 61 SSAILLLACIA 68

BLAST of MELO3C002341 vs. ExPASy TrEMBL
Match: I1K083 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.9e-08
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  MVSKVEETLRRKYQQVQPPQTAVSAVAAATTTATTKQIQCNKTKYPKFKRSSSNVEEDGA 60
          MVSKVEE ++R  +Q+QP        A        KQIQCNK K  KFKRSSSN+EEDGA
Sbjct: 1  MVSKVEEAMKRN-KQMQPQ-------AQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGA 60

Query: 61 SSAMLLLACIAFA 74
          SSA+L LACIA+A
Sbjct: 61 SSAILFLACIAYA 65

BLAST of MELO3C002341 vs. TAIR 10
Match: AT5G50335.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 7.7e-06
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0

Query: 40 CNKTKYPKFKRSSSNVEEDGASSAMLLLACIAFAS 75
          CNK K  +FKRS+SN++ DGASSA+ LLACIA +S
Sbjct: 35 CNKEKSCRFKRSTSNLDNDGASSAIFLLACIACSS 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN64384.11.0e-2390.54hypothetical protein Csa_013100 [Cucumis sativus][more]
KAG6584135.11.7e-1879.45hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7012298.13.6e-1368.49hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyro... [more]
GFZ03822.13.1e-0958.90hypothetical protein Acr_16g0004460 [Actinidia rufa][more]
QCD80969.11.6e-0860.27hypothetical protein DEO72_LG2g1293 [Vigna unguiculata][more]
Match NameE-valueIdentityDescription
A0A0A0LTS04.9e-2490.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1[more]
A0A7J0FYN81.5e-0958.90Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1[more]
A0A4D6KYW97.5e-0960.27Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1293 PE=4 SV=1[more]
A0A061FZA43.7e-0860.56Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014581 PE=4 SV=1[more]
I1K0834.9e-0858.90Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G50335.17.7e-0665.71unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38398EXPRESSED PROTEINcoord: 1..74
NoneNo IPR availablePANTHERPTHR38398:SF1EXPRESSED PROTEINcoord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002341.1MELO3C002341.1mRNA