MELO3C002241.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002241.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	ENDO3c domain-containing protein
Location	chr12: 25276222 .. 25278540 (-)
RNA-Seq Expression	MELO3C002241.jh1
Synteny	MELO3C002241.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATCGACTTCGAAAATTGACGGAACGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATAGACCTCGAGCTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTACTGAGCCGTATCCAGCTCATTCTTCGCCCACTTCGGACGAATGTCTGTCCGTGAGGGACGATCTGTTGAATCTTCATGGTTTCCCGCGAGAGTTTCTTAAGTATCGGAAGGAGAGAGAGAGGCTGAGTGAGTGCTGCTCTTTCGTGGACGGCGTCCGCGTTGAGCACGGGGATAATGTGGAGTCGGAGCTCGTCGTTGAGAAGGAGAGCGTTTTGGATGGATTGGTGAAGACTGTTCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGTTTCTCTCAAGTCCGCCTTTTCTACTTGGGAGGATGTGAGTCTTCTGCTTTCTTTGATTAGATTACGACTGTTCTTTTTTTTTATGTTGGATGACATGTTCTTAGGGGACAGATTTCTGTCAATTTCTTTTTGCAATGGAACGTCAATGAACAGCATTTAGATAATTGAAACTGAATCCTCTTAGTTCTTGTTTTTTCAATGTAATCTTCTATCCGATATCATTAGTTTAGTATCTTTTCTCTTGTTGTTCTTGCATAAACCATAACCATGAGTCAATTCCGAACTTGAACATCTCTATTTTCTAATCATACGAAAGTCATCTTTCATAATAAATCTTATATTTAGTTTAAGGGCAAGCAAAATTGCTATCTGAAATTCAAATTTGGACAATGTGATGGGAGAGTTGGAGTACGTAGGACAGACCTTCAATGGTTTTTCCCAGCAATCTTGATGAAGTAAGTGTGCCTTTAAAGAAAGGGGTTTTGATTTTTCATTTATGTACTCATATTTGAATGTAGGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACCTACAAAAGCCTCGTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCGTCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTATTGTTTCTGAAAAGAATAACTGCCTTCGTAATCTAATTTATTTTCTAACATTTTAGATCTTGTCAGTTCATGGAACTATATCACCCAATGTTTGTATCCTACAAAGCACCGACACTCCTGTTGATTTTTCAAAGAAAACCCACTGGCCACTTTTCTTCCATCTTTGAAAGTCCAAACCCCCTCTCCACCCAATATTCTATTGCCTTTTTCATGAAATGATGAACGTTCTTTTAATCTTCAAAGGAAATATTCACAATTTGTCCAAATATGCACCCGTATATTTATTGTTATAAGAAAAACAAAGTGTGTCCCTAACATGTTGTGTCCTACATTTTAGAAATTAACGTGTCAATATTGCGTCGTGGGTAAATGTTTATGCTTGCGTCTTAGCCTTTATCTATAGGGATCCTAGTTTGAAGGCTTCTACTGTTTTTTTTCCTTTTCTGTGTGTTCTCATGGTTATCTATGGCTCGCATTGTTCACAAAATTCCTCAATGTTAAGGCATCATAGATTCTTCACAAGATTACGTTGGGGACATCTTGGTTGCTTAGTGTTATGGCATCAATAATCAATCATACAATTTAAAAATGTCAGGTGGCCTGTGTGCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTAGACACTCATGTGAGTAATTAAATTATTCTTTCGGATGACTTTATGATCCTTGTTCTCTAAAGACCATTGAAAGGTTTTGATTTTCCAACATGTTTGCAGGTATTTCAGATTGCAAAGTTCGTTGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAGTTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACAAAGAAAACAGGCGCCCGACAACGAATGGGATCTGAAGAACAGTCTTGTCCTTTGTTCAAGTACTCCAATAATCCTTAAATCTGTGAATATAGATGTATATACCAAGAGTTTATTTATGAAAGCTTCTTTACTTGTCTCTTTTCTTTTGTTCCTAAGTTGTATAAAAATGCCATGCTAATATCTACAATTAGGAATGCGTTATCTGTAAGAAAGTGTTTCATTTAAGGCCATTATTATTATTATTATTTAATTGAAGAAACCTTGGACTTTGCCA

mRNA sequence

GAATCGACTTCGAAAATTGACGGAACGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATAGACCTCGAGCTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTACTGAGCCGTATCCAGCTCATTCTTCGCCCACTTCGGACGAATGTCTGTCCGTGAGGGACGATCTGTTGAATCTTCATGGTTTCCCGCGAGAGTTTCTTAAGTATCGGAAGGAGAGAGAGAGGCTGAGTGAGTGCTGCTCTTTCGTGGACGGCGTCCGCGTTGAGCACGGGGATAATGTGGAGTCGGAGCTCGTCGTTGAGAAGGAGAGCGTTTTGGATGGATTGGTGAAGACTGTTCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGTTTCTCTCAAGTCCGCCTTTTCTACTTGGGAGGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACCTACAAAAGCCTCGTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCGTCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGATCTTGTCAGTTCATGGAACTATATCACCCAATGTGGCCTGTGTGCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTAGACACTCATGTATTTCAGATTGCAAAGTTCGTTGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAGTTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACAAAGAAAACAGGCGCCCGACAACGAATGGGATCTGAAGAACAGTCTTGTCCTTTGTTCAAGTACTCCAATAATCCTTAAATCTGTGAATATAGATGTATATACCAAGAGTTTATTTATGAAAGCTTCTTTACTTGTCTCTTTTCTTTTGTTCCTAAGTTGTATAAAAATGCCATGCTAATATCTACAATTAGGAATGCGTTATCTGTAAGAAAGTGTTTCATTTAAGGCCATTATTATTATTATTATTTAATTGAAGAAACCTTGGACTTTGCCA

Coding sequence (CDS)

ATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATAGACCTCGAGCTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTACTGAGCCGTATCCAGCTCATTCTTCGCCCACTTCGGACGAATGTCTGTCCGTGAGGGACGATCTGTTGAATCTTCATGGTTTCCCGCGAGAGTTTCTTAAGTATCGGAAGGAGAGAGAGAGGCTGAGTGAGTGCTGCTCTTTCGTGGACGGCGTCCGCGTTGAGCACGGGGATAATGTGGAGTCGGAGCTCGTCGTTGAGAAGGAGAGCGTTTTGGATGGATTGGTGAAGACTGTTCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGTTTCTCTCAAGTCCGCCTTTTCTACTTGGGAGGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACCTACAAAAGCCTCGTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCGTCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGATCTTGTCAGTTCATGGAACTATATCACCCAATGTGGCCTGTGTGCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTAGACACTCATGTATTTCAGATTGCAAAGTTCGTTGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAGTTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACAAAGAAAACAGGCGCCCGACAACGAATGGGATCTGAAGAACAGTCTTGTCCTTTGTTCAAGTACTCCAATAATCCTTAA

Protein sequence

MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRDDLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPLFKYSNNP

Homology

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BLAST of MELO3C002241.jh1 vs. NCBI nr
Match: XP_008438070.1 (PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo] >TYJ99137.1 putative DNA glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 616 bits (1589), Expect = 2.30e-222
Identity = 306/318 (96.23%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSFVDGVR EHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           RMGSEEQSCPLFKYSNNP
Sbjct: 301 RMGSEEQSCPLFKYSNNP 307

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BLAST of MELO3C002241.jh1 vs. NCBI nr
Match: KAA0055207.1 (putative DNA glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 612 bits (1577), Expect = 1.55e-220
Identity = 303/318 (95.28%), Postives = 305/318 (95.91%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYP+HSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPSHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECC FVDGVR EHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCFFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNRRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           RMGSEEQSCPLFKYSNNP
Sbjct: 301 RMGSEEQSCPLFKYSNNP 307

[Close]

BLAST of MELO3C002241.jh1 vs. NCBI nr
Match: XP_011651429.1 (putative DNA glycosylase At3g47830 [Cucumis sativus] >KGN64289.1 hypothetical protein Csa_013980 [Cucumis sativus])

HSP 1 Score: 581 bits (1498), Expect = 1.71e-208
Identity = 289/318 (90.88%), Postives = 293/318 (92.14%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVR EH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           R GSEEQSCPLFKYS NP
Sbjct: 301 RRGSEEQSCPLFKYSYNP 307

[Close]

BLAST of MELO3C002241.jh1 vs. NCBI nr
Match: XP_038894941.1 (putative DNA glycosylase At3g47830 [Benincasa hispida])

HSP 1 Score: 545 bits (1405), Expect = 2.54e-194
Identity = 274/317 (86.44%), Postives = 286/317 (90.22%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS  + P AKSIRTVNGFN ST++PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPSPDSCFNGPPAKSIRTVNGFNFSTSDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDG R EH DNVESE V EKESVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSIVDGGRGEHRDNVESEPVDEKESVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+TWEDVLSAESK IEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFSSLKSAFATWEDVLSAESKSIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLE+L  LSVDEIK EL+TFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEYLHGLSVDEIKTELTTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVF+IAKF+GWVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTK+TGARQ
Sbjct: 241 THVFEIAKFIGWVPDDADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTKRTGARQ 300

Query: 301 RMGSEEQSCPLFKYSNN 317
           R GSEEQSCPLFKYS +
Sbjct: 301 RKGSEEQSCPLFKYSKD 306

[Close]

BLAST of MELO3C002241.jh1 vs. NCBI nr
Match: XP_022994647.1 (putative DNA glycosylase At3g47830 [Cucurbita maxima])

HSP 1 Score: 519 bits (1336), Expect = 6.86e-184
Identity = 261/318 (82.08%), Postives = 280/318 (88.05%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP  DSHS+ PRAKSIRTVNGF+CST EPYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREF+ YRKERERLSECCS VDG   E  +NV+SE      SVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKSE------SVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSE+AF SLKSAF+TWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLE+L +LS+DE+KAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGA-R 300
           THVF+IAKF+GWVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+TG  R
Sbjct: 241 THVFEIAKFIGWVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGR 300

Query: 301 QRMGSEEQSCPLFKYSNN 317
           QR  SE QSCPL KYS N
Sbjct: 301 QRKVSENQSCPLLKYSKN 301

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy Swiss-Prot
Match: F4JCQ3 (Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 7.5e-87
Identity = 175/305 (57.38%), Postives = 210/305 (68.85%), Query Frame = 0


Query: 7   KKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRDDLLNLH 66
           K++RL K     D  S  P  KS  TV+G N     PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNK----YDGESKTPANKS--TVDGGN-----PYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVLSQNTTE 126
           GFP EF  YR++R R     S VD    +     E+    E+ESVLDGLVK +LSQNTTE
Sbjct: 66  GFPPEFANYRRQRLR---SFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTE 125

Query: 127 ANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLC 186
           +NS+RAF SLK+ F  W+DVL+AESK IE+AIRCGGLAP KA CIKNIL+ L   RG+LC
Sbjct: 126 SNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLC 185

Query: 187 LEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQI 246
           LE+LR LSV+E+K ELS FKG+GPKT           V+CVLMFNLQ +DFPVDTHVF+I
Sbjct: 186 LEYLRGLSVEEVKTELSHFKGVGPKT-----------VSCVLMFNLQHNDFPVDTHVFEI 245

Query: 247 AKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEE 306
           AK +GWVP  ADRNKTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     +   +  
Sbjct: 246 AKALGWVPKTADRNKTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASP 285

Query: 307 QSCPL 312
             CPL
Sbjct: 306 DDCPL 285

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BLAST of MELO3C002241.jh1 vs. ExPASy Swiss-Prot
Match: C7IW64 (Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 5.2e-11
Identity = 68/237 (28.69%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 35   GFNCSTTEPYPAHSSPTSDECLSVRDDLLNLHGFPREFLKYRKERERLSECCSFVDGVRV 94
            GF  +TT      +  +S+ C + + +   LHG     ++  K+ ++ S     VDG + 
Sbjct: 1335 GFQTATTS-----NLYSSNLCQNQKANSEVLHGVSSNLIENSKDDKKTSPKVP-VDGSKA 1394

Query: 95   EHGDNVESELVVEKESVLDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCI 154
            +       +   +K    D L K VL  +  +  S+ A  S+      WE +  AE K I
Sbjct: 1395 KRPRVGAGK---KKTYDWDMLRKEVLYSHGNKERSQNAKDSI-----DWETIRQAEVKEI 1454

Query: 155  EDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTIL 214
             D IR  G+    A  IK+ L+ L +  G + LE+LR +  D+ K  L + +G+G K   
Sbjct: 1455 SDTIRERGMNNMLAERIKDFLNRLVRDHGSIDLEWLRYVDSDKAKDYLLSIRGLGLK--- 1514

Query: 215  SVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 272
                    +V CV +  L    FPVDT+V +I   +GWVP         LHL +  P
Sbjct: 1515 --------SVECVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLPESLQLHLLEMYP 1546

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy Swiss-Prot
Match: Q9SJQ6 (DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 5.7e-10
Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+LRD+  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 203  STFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKT 262
             +F G+G K           +V CV +  L    FPVDT+V +IA  +GWVP        
Sbjct: 945  LSFNGLGLK-----------SVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESL 1002

Query: 263  YLHLNKRIP 272
             LHL +  P
Sbjct: 1005 QLHLLEMYP 1002

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy Swiss-Prot
Match: B8YIE8 (Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-09
Identity = 44/129 (34.11%), Postives = 61/129 (47.29%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            WE V  A+ + I  AIR  G+    A  I+  L+ L    G + LE+LRD+  D  K  L
Sbjct: 1339 WEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDHGSIDLEWLRDVPPDSAKDYL 1398

Query: 203  STFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKT 262
             + +G+G K           +V CV +  L    FPVDT+V +I   +GWVP        
Sbjct: 1399 LSIRGLGLK-----------SVECVRLLTLHHLAFPVDTNVGRICVRLGWVPIQPLPESL 1456

Query: 263  YLHLNKRIP 272
             LHL +  P
Sbjct: 1459 QLHLLELYP 1456

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy Swiss-Prot
Match: Q9SR66 (DEMETER-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DML2 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 8.2e-09
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 0


Query: 101 ESELVVEKESV-LDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIR 160
           ES    +K+SV  D L K   S       +ER   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTV-----DWDALRCTDVHKIANIII 838

Query: 161 CGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGT 220
             G+    A  IK  L+ L K+ G + LE+LRD+  D+ K  L +  G+G K        
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLK-------- 898

Query: 221 ISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 272
              +V CV + +L +  FPVDT+V +IA  +GWVP     ++  +HL +  P
Sbjct: 899 ---SVECVRLLSLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BJ43 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003430 PE=4 SV=1)

HSP 1 Score: 616 bits (1589), Expect = 1.12e-222
Identity = 306/318 (96.23%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSFVDGVR EHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           RMGSEEQSCPLFKYSNNP
Sbjct: 301 RMGSEEQSCPLFKYSNNP 307

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AW45 (putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 SV=1)

HSP 1 Score: 616 bits (1589), Expect = 1.12e-222
Identity = 306/318 (96.23%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSFVDGVR EHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           RMGSEEQSCPLFKYSNNP
Sbjct: 301 RMGSEEQSCPLFKYSNNP 307

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UKV1 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00480 PE=4 SV=1)

HSP 1 Score: 612 bits (1577), Expect = 7.53e-221
Identity = 303/318 (95.28%), Postives = 305/318 (95.91%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYP+HSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPSHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECC FVDGVR EHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCFFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNRRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           RMGSEEQSCPLFKYSNNP
Sbjct: 301 RMGSEEQSCPLFKYSNNP 307

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LTF1 (ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4 SV=1)

HSP 1 Score: 581 bits (1498), Expect = 8.28e-209
Identity = 289/318 (90.88%), Postives = 293/318 (92.14%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVR EH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQ 300
           THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQ
Sbjct: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQ 300

Query: 301 RMGSEEQSCPLFKYSNNP 318
           R GSEEQSCPLFKYS NP
Sbjct: 301 RRGSEEQSCPLFKYSYNP 307

[Close]

BLAST of MELO3C002241.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JWG0 (putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 PE=4 SV=1)

HSP 1 Score: 519 bits (1336), Expect = 3.32e-184
Identity = 261/318 (82.08%), Postives = 280/318 (88.05%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP  DSHS+ PRAKSIRTVNGF+CST EPYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREF+ YRKERERLSECCS VDG   E  +NV+SE      SVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKSE------SVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSE+AF SLKSAF+TWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVD 240
           RRGKLCLE+L +LS+DE+KAELSTFKGIGPKT           VACVLMFNLQKDDFPVD
Sbjct: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKT-----------VACVLMFNLQKDDFPVD 240

Query: 241 THVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGA-R 300
           THVF+IAKF+GWVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+TG  R
Sbjct: 241 THVFEIAKFIGWVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGR 300

Query: 301 QRMGSEEQSCPLFKYSNN 317
           QR  SE QSCPL KYS N
Sbjct: 301 QRKVSENQSCPLLKYSKN 301

[Close]

BLAST of MELO3C002241.jh1 vs. TAIR 10
Match: AT3G47830.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 322.0 bits (824), Expect = 5.3e-88
Identity = 175/305 (57.38%), Postives = 210/305 (68.85%), Query Frame = 0


Query: 7   KKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRDDLLNLH 66
           K++RL K     D  S  P  KS  TV+G N     PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNK----YDGESKTPANKS--TVDGGN-----PYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFLKYRKERERLSECCSFVDGVRVEHGDNVESELVVEKESVLDGLVKTVLSQNTTE 126
           GFP EF  YR++R R     S VD    +     E+    E+ESVLDGLVK +LSQNTTE
Sbjct: 66  GFPPEFANYRRQRLR---SFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTE 125

Query: 127 ANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLC 186
           +NS+RAF SLK+ F  W+DVL+AESK IE+AIRCGGLAP KA CIKNIL+ L   RG+LC
Sbjct: 126 SNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLC 185

Query: 187 LEFLRDLSVDEIKAELSTFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQI 246
           LE+LR LSV+E+K ELS FKG+GPKT           V+CVLMFNLQ +DFPVDTHVF+I
Sbjct: 186 LEYLRGLSVEEVKTELSHFKGVGPKT-----------VSCVLMFNLQHNDFPVDTHVFEI 245

Query: 247 AKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEE 306
           AK +GWVP  ADRNKTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     +   +  
Sbjct: 246 AKALGWVPKTADRNKTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASP 285

Query: 307 QSCPL 312
             CPL
Sbjct: 306 DDCPL 285

[Close]

BLAST of MELO3C002241.jh1 vs. TAIR 10
Match: AT2G36490.1 (demeter-like 1 )

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-11
Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+LRD+  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 203  STFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKT 262
             +F G+G K           +V CV +  L    FPVDT+V +IA  +GWVP        
Sbjct: 945  LSFNGLGLK-----------SVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESL 1002

Query: 263  YLHLNKRIP 272
             LHL +  P
Sbjct: 1005 QLHLLEMYP 1002

[Close]

BLAST of MELO3C002241.jh1 vs. TAIR 10
Match: AT3G10010.1 (demeter-like 2 )

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-10
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 0


Query: 101 ESELVVEKESV-LDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIR 160
           ES    +K+SV  D L K   S       +ER   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTV-----DWDALRCTDVHKIANIII 838

Query: 161 CGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTILSVHGT 220
             G+    A  IK  L+ L K+ G + LE+LRD+  D+ K  L +  G+G K        
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLK-------- 898

Query: 221 ISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 272
              +V CV + +L +  FPVDT+V +IA  +GWVP     ++  +HL +  P
Sbjct: 899 ---SVECVRLLSLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

[Close]

BLAST of MELO3C002241.jh1 vs. TAIR 10
Match: AT5G04560.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.5e-09
Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            +E +  A    I +AI+  G+    A  IK+ L  + K  G + LE+LR+   D+ K  L
Sbjct: 1218 YEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYL 1277

Query: 203  STFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKT 262
             + +G+G K           +V CV +  L    FPVDT+V +IA  +GWVP        
Sbjct: 1278 LSIRGLGLK-----------SVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESL 1335

Query: 263  YLHLNKRIP 272
             LHL +  P
Sbjct: 1338 QLHLLELYP 1335

[Close]

BLAST of MELO3C002241.jh1 vs. TAIR 10
Match: AT5G04560.2 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.5e-09
Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            +E +  A    I +AI+  G+    A  IK+ L  + K  G + LE+LR+   D+ K  L
Sbjct: 1476 YEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYL 1535

Query: 203  STFKGIGPKTILSVHGTISPNVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKT 262
             + +G+G K           +V CV +  L    FPVDT+V +IA  +GWVP        
Sbjct: 1536 LSIRGLGLK-----------SVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESL 1593

Query: 263  YLHLNKRIP 272
             LHL +  P
Sbjct: 1596 QLHLLELYP 1593

The following BLAST results are available for this feature:

BLAST of MELO3C002241.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438070.1	2.30e-222	96.23	PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo] >TYJ99137.1 putativ...	[more]
KAA0055207.1	1.55e-220	95.28	putative DNA glycosylase [Cucumis melo var. makuwa]	[more]
XP_011651429.1	1.71e-208	90.88	putative DNA glycosylase At3g47830 [Cucumis sativus] >KGN64289.1 hypothetical pr...	[more]
XP_038894941.1	2.54e-194	86.44	putative DNA glycosylase At3g47830 [Benincasa hispida]	[more]
XP_022994647.1	6.86e-184	82.08	putative DNA glycosylase At3g47830 [Cucurbita maxima]	[more]

BLAST of MELO3C002241.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JCQ3	7.5e-87	57.38	Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 ...	[more]
C7IW64	5.2e-11	28.69	Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2	[more]
Q9SJQ6	5.7e-10	32.56	DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2	[more]
B8YIE8	2.8e-09	34.11	Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2	[more]
Q9SR66	8.2e-09	30.23	DEMETER-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DML2 PE=3 SV=2	[more]

BLAST of MELO3C002241.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ43	1.12e-222	96.23	Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AW45	1.12e-222	96.23	putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 ...	[more]
A0A5A7UKV1	7.53e-221	95.28	Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LTF1	8.28e-209	90.88	ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4...	[more]
A0A6J1JWG0	3.32e-184	82.08	putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 P...	[more]

BLAST of MELO3C002241.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47830.1	5.3e-88	57.38	DNA glycosylase superfamily protein	[more]
AT2G36490.1	4.0e-11	32.56	demeter-like 1	[more]
AT3G10010.1	5.8e-10	30.23	demeter-like 2	[more]
AT5G04560.1	6.5e-09	32.56	HhH-GPD base excision DNA repair family protein	[more]
AT5G04560.2	6.5e-09	32.56	HhH-GPD base excision DNA repair family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003265	HhH-GPD domain	SMART	SM00478	endo3end	coord: 120..288 e-value: 7.9E-9 score: 45.3
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 116..271 e-value: 7.9E-10 score: 39.1
IPR003265	HhH-GPD domain	CDD	cd00056	ENDO3c	coord: 115..286 e-value: 4.81396E-24 score: 93.8454
IPR023170	Helix-hairpin-helix, base-excision DNA repair, C-terminal	GENE3D	1.10.1670.10		coord: 215..317 e-value: 4.6E-19 score: 70.2
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 105..214 e-value: 3.0E-18 score: 68.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR47203	FAMILY NOT NAMED	coord: 7..316
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 103..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002241.jh1.t1	MELO3C002241.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003824	catalytic activity