MELO3C002161 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTTGATTGGACGACATGAGTTTTCAAAGAATGTAATAGTTTTAAAACAAAATTAAAAAAAAGTGTTATTTCCTAAACAATTTAGCTTTTCTTATATTTCTCAACACTGCGGCAAAGACAAAAGGTTCGTGCTGAATTGCGTCGCATTGAAGCAGCCCACCGCCAACGCCCGTCGGAACGGAGCTGTTTTTTCCTACAAAGCCGGTCAGTACTATGCGTCTATCAACAATATTTACTCTCATAATTTTTCAATGATGTGCCCTTCCCTAGTTCGTTCGATGATGATAAATTTTCTGTAAAAGTAAATTATAGATTCTACAATTGTAACATTGAACCATTCAATTCTCTGAAACTTTGTCTTCTCATGGGTGCAAATTTTGTAATTCGAAAAATAGGGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGGATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTCCTTGGAAATCGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGTAGCGCTGGAGAGACTCATTTCAATGTGAAGATCGTGTCTCCAAAATTTGAAGGGCAAAGCCTTGTGAAGCGCCATAGAATGGTCTATGATGCTTTGGCCGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAGACTCCGCAAGAAACTGGAGCATAATGATGGACCAAAATGATGTTCAGATTCGCCTCACAATGTGAGTTTTCAAATGATTTCTATAGTTTAGAACTGCAATGATTTAGGCATTTATGCTCAAGAGATAAATGCTGAACTGCAATGTGTCTACTTGCAAGGAAGACAATGTATTGTAGGATAAATGCTGCTCAAAGAAAAAAATACATTTCACTTATTAGATGCTGCGGTACTTCTATCAAATAATTTACTATTTTCACTTATTAGATGCAGTGCTTATTTTCACTTATTAGATGCTTGGTGCTTCTATCATATTTGACTAGATTTATTATTTTAGAGTAGTTCTTATTGAACTGAATCGACTTATCTTGGATCTAAAAATACACTCTTTTGTTCTTTGATTAAAGTTTGATACCCATGTCTGCAATAGTGAGGAGTAATAGAAATTTAACTTGATTAGTTCATGAAAGAGACTAATTTACCACTTACAAACAACTTATCCTATTGAGAATCTATTACGCCTAACTTATGATGCAAAATCATCTAAAGATTTAGATAAAATGACCTTACTTGAACATGATCTATTCTATAAATTGTACAATTGTGTTCTTGAGTTCATCTAAATGCGGTTCATGTGATGGTCAAAATTTAATCCACTTGGATAATATGCTTTGTCATATTGAAACATATTATTCCCTCATTGACAGTGCATAAACATCTAGTAAGCATCTAAATAAGGATTCATGTGATTTGTCACCTTTTCACTTCACTGAAACAGTATCATGAAACTCATCTATAAATAAATTTGTCATATTGGAAATTTGTTACTCCACCCATTACATTACGGTGTCTCACAAATGGTAAGGATTCAAATAAGGGTTCGTGTAACGGTCACAATTTAACTCGCATGCAAGGTAATCTTCTAAAGGCCAAATTCCATGGTGCACATGTAGAATAGAATGCCTTCATGCATCATCATTGAAATCTCCCTCGATTACATACCTTATCAAACAGATCTATTTTGTGCTTAAACATCAATTTTCTCCCATTTTAAGTCTCAAACGTTGGATTTTCTTTTTATCTTGCAGAGGGGGCCAAATTGTGGAGCCAAGAAAGGAGTGAACTTTACCCCTCTCAACTCGTGGTAATTTGGAAATGTATGTATATACTTGAAGTTGTTGTCTTTCTAATTTGTTCTCCAAAAAAATGTTAAAGACCAAATACAATGTGGCTCCTTACAACATTTCTAGCTCTGCTGCTCTGCCTTGATTATAAAGATAGACTTCATCTTCATGTCTTGCGGTTGATTCTGAATTTAGGTACTAACCTTGCAACCTTGAAGTTTGGGTTAAAGGAAAAATTG ATGCAGTTGATTGGACGACATGAGTTTTCAAAGAATCTTTTCTTATATTTCTCAACACTGCGGCAAAGACAAAAGGTTCGTGCTGAATTGCGTCGCATTGAAGCAGCCCACCGCCAACGCCCGTCGGAACGGAGCTGTTTTTTCCTACAAAGCCGATTCTACAATTGTAACATTGAACCATTCAATTCTCTCAAATTTTGTAATTCGAAAAATAGGGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGGATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTCCTTGGAAATCGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGTAGCGCTGGAGAGACTCATTTCAATGTGAAGATCGTGTCTCCAAAATTTGAAGGGCAAAGCCTTGTGAAGCGCCATAGAATGGTCTATGATGCTTTGGCCGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAGACTCCGCAAGAAACTGGAGCATAATGATGGACCAAAATGATGTTCAGATTCGCCTCACAATAGGGGGCCAAATTGTGGAGCCAAGAAAGGAGTGAACTTTACCCCTCTCAACTCGTGGTAATTTGGAAATGTATGTATATACTTGAAGTTGTTGTCTTTCTAATTTGTTCTCCAAAAAAATGTTAAAGACCAAATACAATGTGGCTCCTTACAACATTTCTAGCTCTGCTGCTCTGCCTTGATTATAAAGATAGACTTCATCTTCATGTCTTGCGGTTGATTCTGAATTTAGGTACTAACCTTGCAACCTTGAAGTTTGGGTTAAAGGAAAAATTG ATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGGATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTCCTTGGAAATCGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGTAGCGCTGGAGAGACTCATTTCAATGTGAAGATCGTGTCTCCAAAATTTGAAGGGCAAAGCCTTGTGAAGCGCCATAGAATGGTCTATGATGCTTTGGCCGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAGACTCCGCAAGAAACTGGAGCATAA MASRGANVVLSRANRMKTKLQSALSASSLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA Homology
BLAST of MELO3C002161 vs. ExPASy Swiss-Prot
Match: Q84W65 (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2) HSP 1 Score: 119.0 bits (297), Expect = 3.1e-26 Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy Swiss-Prot
Match: Q682I1 (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.9e-23 Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy Swiss-Prot
Match: Q5RCE5 (BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-12 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy Swiss-Prot
Match: Q9D8S9 (BolA-like protein 1 OS=Mus musculus OX=10090 GN=Bola1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.3e-12 Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy Swiss-Prot
Match: Q12238 (UV-induced protein uvi31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=uvi31 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.3e-12 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of MELO3C002161 vs. NCBI nr
Match: TYJ99061.1 (protein BOLA1 [Cucumis melo var. makuwa]) HSP 1 Score: 191.4 bits (485), Expect = 3.7e-45 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of MELO3C002161 vs. NCBI nr
Match: KGN64204.1 (hypothetical protein Csa_014195 [Cucumis sativus]) HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44 Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of MELO3C002161 vs. NCBI nr
Match: XP_022994950.1 (protein BOLA1, chloroplastic [Cucurbita maxima]) HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42 Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of MELO3C002161 vs. NCBI nr
Match: XP_028756592.1 (protein BOLA1, chloroplastic-like [Prosopis alba]) HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36 Identity = 84/102 (82.35%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of MELO3C002161 vs. NCBI nr
Match: XP_028779098.1 (protein BOLA1, chloroplastic-like [Prosopis alba]) HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36 Identity = 84/102 (82.35%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy TrEMBL
Match: A0A5D3BK08 (Protein BOLA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002650 PE=3 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy TrEMBL
Match: A0A0A0LT67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 8.9e-45 Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy TrEMBL
Match: A0A6J1K2R4 (protein BOLA1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490536 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42 Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy TrEMBL
Match: A0A6A1VMJ9 (SufE-like protein, chloroplastic OS=Morella rubra OX=262757 GN=CJ030_MR5G021735 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.8e-36 Identity = 84/102 (82.35%), Postives = 95/102 (93.14%), Query Frame = 0
BLAST of MELO3C002161 vs. ExPASy TrEMBL
Match: A0A1U8Q145 (protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.6e-36 Identity = 82/100 (82.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of MELO3C002161 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E ) HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27 Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0
BLAST of MELO3C002161 vs. TAIR 10
Match: AT1G55805.1 (BolA-like family protein ) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24 Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of MELO3C002161 vs. TAIR 10
Match: AT5G17560.1 (BolA-like family protein ) HSP 1 Score: 52.4 bits (124), Expect = 2.5e-07 Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of MELO3C002161 vs. TAIR 10
Match: AT5G09830.1 (BolA-like family protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06 Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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