MELO3C002120.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002120.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	pre-mRNA-splicing factor SPF27 homolog
Location	chr12: 26109291 .. 26113129 (+)
RNA-Seq Expression	MELO3C002120.jh1
Synteny	MELO3C002120.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAACAAAATTCGACGCGGGCGGCCGCGGAGTCTTCTTCGTCTTCTCGCGCTCTGAGCTTAGTAAATCCGAAACTCAAAACCTCTATTGTTCGTCGTGGTGACAATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGTAATTTCACTTGCAATTTCCTTTTCCGTCGGAGTTTCCTCTAGGTTATGCTCTTTCCGCTTGATTTCATAGGCTACTGTGCCTGAAAGAACTTACTTCTTTTCCGCTGGATATATTTGCTAAACAGTTACTAATTGATGAGTTTTGAAGCTTTTAGAAGCTTCATCTGCTGTTTTTGCTAGACAGTTACTAATTGACAAGAACATAGATATTGGCATATTGCTTATCCGAAAGTCACCGTGTGTCATCCAATAATTATGGGACGCCACTCTACATTAGTTCTTTAACCATTACGTTTGATTGATCGTGAGAATATTTCAAAATGTGATAATACTAGCGACAATCTATTCAACTGAACGATGTTTGAACTCAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGTGAAGTGTTGATACATTTTGATTGTTCTATTATAGGCATTTAAGATTTTTCTTTTGCCCAACTTAATTTTATGGAGATCACAGATCAGTAGAGTTGACTACTTGAACGCATACAGCTCTTCTAATATCTGCAATCCCGAGTCAATATTTTCACGGGTTTTCTTAAGTTGTTAAGTTTGATTTATATTTGGCCCAAAACTCCGTTGAGATAGCCAGCTCCAAGTACTTTATGTTACCTGAACGTGGAAATCACTTTGCTGCACGTAACTCTTTCCCGTTCATCATATTTGTATCCATTTTCTTGGTTGCAGCTGGTTTCTTATATCTAGTTTGTGTACCTTTGGTCATGCTTATGAGAGGTGTGATGTGATTTACACAGTTTTGGTAAGAAAAAGCAAAATACTGAAGATTATGCGTCCAAACCCTGAAAAGAAACATTAGAGAGGTCTTGATGATTCATTAGGAAATAATAAGGAACCTAACCACTGGTGGTCCATCTGTGTCATACTGTAGGCTGGAAAATTTGGATTTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGGTTTGTTATTATATATATACTTTTTATGTTATATTTTAATCGAACTACTAATTATGTTTTTATTTTATCACATATGGTTCCTAATCAATCCTTTGCTTTCTAACTTCCTATAGAGTAAATTGTTCCATTACTTGCAAGAAAAAAGAATTTCAAATGGAGAAATAGTTGTTTTACATCATATGTTTGTGCATCTCTCTTTCTTTAATGTACTGCTAGTTGGTTTTTTTATTTTTAATTTTCATTAATCATTATTATTTGTTTTTATAATTAGTACCCAAACTTCTATCAAGAAAATTGAAAGAACACAAGGACATAAAAGAAAAAGAAGAAACTCACAAATGAAGAGACAATCTAAGAAAGGGCCTCAAATCAAGCAAAACATAACCTAACAAGTAGTTACAAAACGACTTTGCCATCAATGAAGGTATACCGTATATGATTCTCTGTCTGAACTGAATTCACTCATTAATGAAGGTATACAGTATCTTGTCTCCAATACTCAGCAGACATGAACCATCCACGTAAAGTTGGTCCTGCCTATGGCTCTTTCTTTCTGCATTTATGTTTGCAGAGTAGGGTTCAAATTTGAGAAGGGTTAGCACTTCACATCATTTAAGGACGTAAAGCCTGGTGATTTGGTACTTGGAAAAACATATTTTACAATTTGATGCATTGTTGACAATTCTTTGGTGGTTTCTAGTTTTCTTTATAGTCGTGTCAACGAACGTATGTACATACAGATTGGGATAGGTGCTTATCTAGGGCGGTTTCATAGGTTTACTTACAGACTATGAATCAATCCTCTTAAATGTATAAAACGGGATACACAAGAACTTAATGTTTGGGATCTTCATGGTCTAATAACAATACGATTCTGTGTTCGAATATTATCTACTGTAGATTCCGACATTCACTTGCTTATAAGATTCTGTGTTTGAATATTATCCATGGTAGATTCCAACATTCACTTGTATGGGCATGTTATCTGAGGCAAGGACTGTTGCTATGAAAACTGAAAACTATAGCATCACAGGCATTAGTTTTGTGGTACACTTGGCCACATTTTATCTGTCATTTCTGAGTGAAATGAACATGAAAGTACCAAGTACATCTGTTATCTGACCAAAAATGACCATATATAATTGTTACTTATATTGCCATGATGTTGATTGTTATCAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAGCATCCCTGTAATTCATGTCAATTCTTTGAAATCTTTGGTTGATTATTTATGCAATGCCCAGCAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGTAATATTACCTTTTCAATTTGATTTATTTTTATTACTCGTGTGTTTGTCATATTTACAACTGAGCTGAGGGTAACGATTCAGGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAAGGTACGCTTTAGATGTCGTCTCTTGTTCTTAATATCCGACGTTTAACCCAAAGTTCACTTCCATTTCACCTCCGTATATTAGAATTTCTAACTTAACTCTATTTGTACAATATTCTCCTTTCTATTGTTAATTTCCAATATCTCGTATTAAATGAGATATCTGTCATGTGTTACCGTACCCCTCTTCACATTAGTTCAGCAATCTCAGGGCATAAATTAGGACTAATTCTACTCTACCATTAATGTACTCGCATGTTTCCTCTTCCAACATATGAGATAATGCTATAATTCAATCTATATTTATCAAGTTCGTAAAGGAGAAAGCTAAGTTTAGTGATGGTGGAAAATTTATCCTTTTCAGTATTATATCATGTTAATTATACTGGTATATTATAACATGTTTTTTTGTCATTTCAATGGAAAAGGGGAGCGTCTTAACCATGGTTTTTGCTACTCAAAAGTAAAGACTCCCAACGTCTTTTGTTGCCGTTATGATATGCCTACATGGAAGATGAGTTAGATTTCTGCTTATTATAAGAGGTTGGTTGCTTTTCTTGGCCTCCAAAGTTCGTGTCATTTTCAAATTTTATATTGAATTGATTTGTATCTGTACCTTTAGTGAAGTAATTTGAAAACACCTACTTCTGCTAACCGTGTTACTTGGTTACTCTTCGACTTGAATATAGATTATTGTGTAAAAATTATTTAACCCAGACTATCTATCAGATGGTTAATATTTGACTAA

mRNA sequence

TCCCAACAAAATTCGACGCGGGCGGCCGCGGAGTCTTCTTCGTCTTCTCGCGCTCTGAGCTTAGTAAATCCGAAACTCAAAACCTCTATTGTTCGTCGTGGTGACAATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGCTGGAAAATTTGGATTTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAAGGGGAGCGTCTTAACCATGGTTTTTGCTACTCAAAAGTAAAGACTCCCAACGTCTTTTGTTGCCGTTATGATATGCCTACATGGAAGATGAGTTAGATTTCTGCTTATTATAAGAGGTTGGTTGCTTTTCTTGGCCTCCAAAGTTCGTGTCATTTTCAAATTTTATATTGAATTGATTTGTATCTGTACCTTTAGTGAAGTAATTTGAAAACACCTACTTCTGCTAACCGTGTTACTTGGTTACTCTTCGACTTGAATATAGATTATTGTGTAAAAATTATTTAACCCAGACTATCTATCAGATGGTTAATATTTGACTAA

Coding sequence (CDS)

ATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGCTGGAAAATTTGGATTTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAA

Protein sequence

MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVNVENGSVSLPVS

Homology

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BLAST of MELO3C002120.jh1 vs. NCBI nr
Match: XP_008462680.1 (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo])

HSP 1 Score: 503 bits (1295), Expect = 1.87e-179
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of MELO3C002120.jh1 vs. NCBI nr
Match: XP_004137495.1 (pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetical protein Csa_014348 [Cucumis sativus])

HSP 1 Score: 501 bits (1291), Expect = 7.63e-179
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of MELO3C002120.jh1 vs. NCBI nr
Match: XP_038893573.1 (pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida])

HSP 1 Score: 491 bits (1264), Expect = 9.98e-175
Identity = 248/256 (96.88%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQI+ELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of MELO3C002120.jh1 vs. NCBI nr
Match: KAG6584331.1 (Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019921.1 Pre-mRNA-splicing factor SPF27-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484 bits (1247), Expect = 3.89e-172
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

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BLAST of MELO3C002120.jh1 vs. NCBI nr
Match: XP_023518986.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483 bits (1244), Expect = 1.12e-171
Identity = 244/256 (95.31%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVS P+S
Sbjct: 241 NLEVNVENGSVSFPMS 256

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BLAST of MELO3C002120.jh1 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.5e-89
Identity = 162/244 (66.39%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 6   NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPK  F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI   ++EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

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BLAST of MELO3C002120.jh1 vs. ExPASy Swiss-Prot
Match: Q6PBE2 (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-27
Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y    V+     LVEEE RR   RP        P P     +  ++  E
Sbjct: 12  VVDALPYFDQGYDAQGVREAAAALVEEETRR--YRPTKNYLSYLPTPDYSAFETEIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAEKGWNLE 244
            KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 192 SKNYEIERAIVQMENEVYQLKERSGENKENIE 221

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy Swiss-Prot
Match: O75934 (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAE 238
            KN EI+    QLE +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy Swiss-Prot
Match: Q9D287 (Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAE 238
            KN EI+    QLE +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy Swiss-Prot
Match: Q5RAX7 (Pre-mRNA-splicing factor SPF27 OS=Pongo abelii OX=9601 GN=BCAS2 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPP-NKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMS 151
           +ER+ A +P   L + RY+L  PP   KKND TAW++ +  +   L HQ +R+ENL+LMS
Sbjct: 72  FERLAARQPIELLSMKRYELPAPPSGQKKNDITAWQECVNNSMAQLEHQAVRIENLELMS 131

Query: 152 KYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKEL 211
           ++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L
Sbjct: 132 QHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSL 191

Query: 212 CEKNMEIQVACFQLEGQIQELRREAAE 238
             KN EI+    QLE +I +++++  E
Sbjct: 192 VSKNYEIERTIVQLENEIYQIKQQHGE 216

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CHH7 (pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 9.08e-180
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 501 bits (1291), Expect = 3.70e-179
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 1.55e-171
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 3.65e-170
Identity = 243/256 (94.92%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPP PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYG DIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of MELO3C002120.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1)

HSP 1 Score: 476 bits (1224), Expect = 6.04e-169
Identity = 238/256 (92.97%), Postives = 248/256 (96.88%), Query Frame = 0


Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA N+NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRS KRPADFLKDLPP+PK+KFEDHP+LAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSFKRPADFLKDLPPVPKVKFEDHPLLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWK+LC KNMEIQVAC Q+EGQIQELRREAAE GW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGW 240

Query: 241 NLEVNVENGSVSLPVS 256
           NLE N+ENGSVSLPVS
Sbjct: 241 NLEANIENGSVSLPVS 256

[Close]

BLAST of MELO3C002120.jh1 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 )

HSP 1 Score: 328.6 bits (841), Expect = 4.6e-90
Identity = 162/244 (66.39%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 6   NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPK  F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI   ++EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

The following BLAST results are available for this feature:

BLAST of MELO3C002120.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462680.1	1.87e-179	100.00	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]	[more]
XP_004137495.1	7.63e-179	99.61	pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetica...	[more]
XP_038893573.1	9.98e-175	96.88	pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida]	[more]
KAG6584331.1	3.89e-172	95.70	Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023518986.1	1.12e-171	95.31	pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C002120.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949S9	6.5e-89	66.39	Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 P...	[more]
Q6PBE2	9.2e-27	34.43	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1	[more]
O75934	1.6e-26	34.95	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1	[more]
Q9D287	1.6e-26	34.95	Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1	[more]
Q5RAX7	1.6e-26	35.75	Pre-mRNA-splicing factor SPF27 OS=Pongo abelii OX=9601 GN=BCAS2 PE=2 SV=1	[more]

BLAST of MELO3C002120.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHH7	9.08e-180	100.00	pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 P...	[more]
A0A0A0LQG2	3.70e-179	99.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1	[more]
A0A6J1EDE4	1.55e-171	95.31	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KLZ4	3.65e-170	94.92	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114953...	[more]
A0A6J1CB04	6.04e-169	92.97	pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of MELO3C002120.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18165.1	4.6e-90	66.39	modifier of snc1,4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..195
None	No IPR available	COILS	Coil	Coil	coord: 214..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR13296:SF0	PRE-MRNA-SPLICING FACTOR SPF27	coord: 15..239
IPR008409	Pre-mRNA-splicing factor SPF27	PFAM	PF05700	BCAS2	coord: 31..237 e-value: 7.6E-74 score: 247.8
IPR008409	Pre-mRNA-splicing factor SPF27	PANTHER	PTHR13296	BCAS2 PROTEIN	coord: 15..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002120.jh1.t1	MELO3C002120.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing