MELO3C002087.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C002087.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	cleavage stimulating factor 64
Location	chr12: 26304662 .. 26308575 (-)
RNA-Seq Expression	MELO3C002087.jh1
Synteny	MELO3C002087.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTGCAATTTTGGAAACGTGTGCTTTGTTGAAAATCTTACCATTTCTAAACTGCTCCCATTGGCATTAGCAACATACGAACCAAATCTCGCGGCGTTGTTGTTGTTGGCGACAAATTGAGAGGGAACCAAATCCTCACACCCAATTGACGTAGGAACGTGAAACATGGCCGGAAAGCAAGTTTCCGGCGCCGGTCTGCCGGAGAGCATTGCAGGAATGTCGAAGAACCAACTATATGATATCATGTCTCAAATGAAGGTACTTCCTTTTTCTTTTTTCCTTCTTGCTGTCAGAATCAATGTTGGTCCGCCCCCTTTTTTCCGCTTTCTGAATTCGGTTTTCGTCTTCGAGCAATGTCTGAATGTCGGTGGAATGATTAGTGTTGTGTTTATTATTATGCAGACACTGATCGAACAGAATCAGCAGCAGGCGAAACAAATCCTCATCCAAAACCCCCTACTAACCAAAGCTCTTTTCCAGGTTTCAATTTTTAGGTTTTTCGTGTATTGAGAATTGTTCTCTTTCATCTACCATTCAAAGCTTGCATAGTGAATCTTGTCTTGGCAGAGTATAAATAGGGTTGTATGTGAAAACGGATTTTGAATCATTGCTGGTATCTCGAGGAAATTGAATGTGCTTTAGTCATGTATGATTATCGTGTGCACATTTGTACAATTTTTTACTAGGTTTAATTTTGATCTTTATGAACGTAAAGTGTTGGATCATTTTCTTGAGTGAGTGGATTTGTCTGTACCGGGTGAAATCAAGTTAATTTCAAAGCACCTTTTTATCTTCCTCAATTGCATTCAAGAATGTGTAGTATTCATGAAGACGAGAAAAGTAGTCCGTAGCCTGAGTTTTCTTCTTGTTACTTCCTCGAAGACTTCATTGACTGTCAAATGTTTGTACGGCCGACTGCAAGGCCTAAGTTTGAACACTAGATTCTATTAGGCATTTGATTGTTCTGTTCAGAATAATTTGTAGCAACTAGGTGTTATCGCAAGTGTTATTCATAACAAGATTTTATGGTCTGGGATACAGAGTTATGTGGTTAATAGTAAGGAGCCTTTTTACTAGTTTATATGCACATTTAGAAAATATTATTGATTCTGCTGTTTTATCTACCAGGCACAAATAATGCTTGGGATGGTACGGCCGCCTCAGGTAGATGTCATTGTTATTCTGCTTTCCTTTTCTTCTTCTTCTTTTTTTTTTTTTTCCTTCTTTTTTCTTTTTCTGCATTTTCTAGTAGACATCTAAGTTATTCTTCTGTTTAGGTTCCAAGCATTCAGCCTTCAGCCTCCCAGCATTCTCAGCCATCAACACAGGCAACTCAACAATCAAATCTTCAGCCTACTCAAACATCCGCTCCTCAAATAAGTTTGCAAGAACAGACAAGTGCACCACCTTTGGCCCCCCCTAGAAAACAGTATCAGAACCAACCATCAATGCCTATCTCATCGACTACTCTTCCTACTGCAAACATTCAGCCTCGGCCAACACCTCTGATTCCCCTACAGACACCGCAGCATCCCAAGGGATTTGATGTCCCCCAAGCAAATCCCATTTCTGTCCCACAACCCTCTCAAATTCCAAGTGTATCTCCAATTCTTCCATCTGCTGCTCAGCCACCTTTACTTCATCAACCTCAGATTTCAACGGCCTCCATGCAGCTGCAGCAGCCATTACAAACAGCCGAAGTTCACCACCTGCCTCCACAGGCACCATTACCCCCACATTCCAGGCCACCTACGGGTCCAAATTTCCACCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCACAACCCATGTTTCATGTAAGTTGGGGTTTTAGTTTTCATGCCACAGTTTTCCTTCTTCTTGGGATTTACAGTACACAAATCTTCAAGTGAAAATGATCTCTCAACCTCTATAGTCTATTTTTGAATGTTTTAGTCAGGTACCAAACTCCCTCCTGGCCTAGGAAATTCATTTCCCCAAGGACAGTCTGGACTACCTAGTCAGCCACCACCCCCTCAATCAATGTATCAGGTATTTCTCTTTCCCTTTTCTTTTTACTTGACTACGAAGTGTTTGTCCTGCACATACTAGATCGACTGAGTTCCTAGAAAGCTGATGAGTCCTGACTTGAGCATGGGCTAATGTCTTCTGTTTGAAGAAAAAAATATATTTTGTTTGATTGGATTACTATGTTTGGCAATCTTTTTTTTTCAATTATTATTTGACAATAGTAGCAGTTTAGACACTATGAACTTGTACATCTTTATAATCTCATTTTGCAACAGTATTATTCTTAGGATGTGCTCATTGCTATTGACTTATAGTAAATATATGTGTCTGTGGAATATTTATCATTTTAAATATTTATGATATTATTCATTTAACGTAAGGCATATATTGAAAATGCCTGAATATCCTTATGGTAAGGCAGTATAATCTTAGATTATACTTTTCTTCTGCTGTATTGGTGTAAATATTTATTGTAATCACCTCTAGGTGCTTGGGGGTTCCCCCTATTTTATTTTTTCAATGAAATGTTTCTTTAAAAAAAGTCCTAATGGTAAGGCATTATTAGCTGGTGTAGATATTGTAAATTGTAATCACACCATAGAAGCGGAATAGCATTGTTGGTTCTAGAGGATTCAAGTTGAATATCATAATGGTTCGTGTTTGATTTGCCTTGCATAGTCGCAGATATTCCTATTGGCCCTGCCTCTCTCTAAGGAGAAACGGGTTTGATATCCCTTTAATCTTGCATGGTTCTCTATTGAGTTTTTGTTTGTGTTCTTGGTGTTTTAGGTGTATGGAGGACTAAATTTTATCTTCTCAAATGTTTAATATGAGTGGCTTTTATTGTTTAATTATTTTCTGTTATTGATATCGTACATGCAAGCCAACTATATATAGTTCTTAGTTATCATAAAAAATAGGGTTTGTATATGCAAGCAGGTATTGAATGAACATGCCATCTACATGTAGACCAAATTCTTAATGCCGTTAAAAATAATTTAACAAATAACCACAATATTAGCTGTTTCAATCTCGTTTGGTGCATTTCTCTCTCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAACTTCAAAGCCTGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAAAACCCTACACTTCCACAGCAACTATCCGGACCACCACCTATACCATCGGTTCCTGGTGGTCAGATGGGCCCTAACAATCAACCTCGTCCAGCACCGCCGGTACTTACCTAATGACCTTATTTTTTTTTCTGTTTGGAATGACAAGTTCTCATCTTTTTTCCATCTTTTGTGATTGATTTTGTGTTCCCCTCTTCTTCTCCCGGTGCGTGGTTCAGTTGAGTCAGGAGATGGAAAAGATGTTACTTCAACAAGTCATGAGTCTCACACCCGAACAAATTAATCTCCTTCCTCCCGAGCAAAGGAATCAAGTGCTTCAACTACAGAAGATATTGCGCCAATGAATAATGTTTTAAGAGGCAGGATTCTCTTCGTTTTCTTCCCCCCAACCCATTGTCAACTCTTACATCATTGATCATGATCTAAATGGTTTTAGGCTACTAGGGGAAGCCATTTTACTGCCGTCTTTAAAACTTTTAAGTATTGCCATGCAGACTGATATGTTACAGTTTTGCTATGTTACAGTTTTTTTTTTTTTTTTGCATTCTTACATGTTTGTGTGAACGACTACTTTCATAAAGCCAGCTTTGCAGATGAAAGTAGAATTAGTCAAACTAAGATGTGGAAACTGTTATGTAAGAAGATTTTTCAATGCTTAGAACAATATTGTTAAATTGTCAAAATACAAAGAGCCACATCGTGGGGCACCATTTTCTTTTCA

mRNA sequence

GGCTTGCAATTTTGGAAACGTGTGCTTTGTTGAAAATCTTACCATTTCTAAACTGCTCCCATTGGCATTAGCAACATACGAACCAAATCTCGCGGCGTTGTTGTTGTTGGCGACAAATTGAGAGGGAACCAAATCCTCACACCCAATTGACGTAGGAACGTGAAACATGGCCGGAAAGCAAGTTTCCGGCGCCGGTCTGCCGGAGAGCATTGCAGGAATGTCGAAGAACCAACTATATGATATCATGTCTCAAATGAAGACACTGATCGAACAGAATCAGCAGCAGGCGAAACAAATCCTCATCCAAAACCCCCTACTAACCAAAGCTCTTTTCCAGGCACAAATAATGCTTGGGATGGTACGGCCGCCTCAGGTTCCAAGCATTCAGCCTTCAGCCTCCCAGCATTCTCAGCCATCAACACAGGCAACTCAACAATCAAATCTTCAGCCTACTCAAACATCCGCTCCTCAAATAAGTTTGCAAGAACAGACAAGTGCACCACCTTTGGCCCCCCCTAGAAAACAGTATCAGAACCAACCATCAATGCCTATCTCATCGACTACTCTTCCTACTGCAAACATTCAGCCTCGGCCAACACCTCTGATTCCCCTACAGACACCGCAGCATCCCAAGGGATTTGATGTCCCCCAAGCAAATCCCATTTCTGTCCCACAACCCTCTCAAATTCCAAGTGTATCTCCAATTCTTCCATCTGCTGCTCAGCCACCTTTACTTCATCAACCTCAGATTTCAACGGCCTCCATGCAGCTGCAGCAGCCATTACAAACAGCCGAAGTTCACCACCTGCCTCCACAGGCACCATTACCCCCACATTCCAGGCCACCTACGGGTCCAAATTTCCACCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCACAACCCATGTTTCATTCAGGTACCAAACTCCCTCCTGGCCTAGGAAATTCATTTCCCCAAGGACAGTCTGGACTACCTAGTCAGCCACCACCCCCTCAATCAATGTATCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAACTTCAAAGCCTGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAAAACCCTACACTTCCACAGCAACTATCCGGACCACCACCTATACCATCGGTTCCTGGTGGTCAGATGGGCCCTAACAATCAACCTCGTCCAGCACCGCCGTTGAGTCAGGAGATGGAAAAGATGTTACTTCAACAAGTCATGAGTCTCACACCCGAACAAATTAATCTCCTTCCTCCCGAGCAAAGGAATCAAGTGCTTCAACTACAGAAGATATTGCGCCAATGAATAATGTTTTAAGAGGCAGGATTCTCTTCGTTTTCTTCCCCCCAACCCATTGTCAACTCTTACATCATTGATCATGATCTAAATGGTTTTAGGCTACTAGGGGAAGCCATTTTACTGCCGTCTTTAAAACTTTTAAGTATTGCCATGCAGACTGATATGTTACAGTTTTGCTATGTTACAGTTTTTTTTTTTTTTTTGCATTCTTACATGTTTGTGTGAACGACTACTTTCATAAAGCCAGCTTTGCAGATGAAAGTAGAATTAGTCAAACTAAGATGTGGAAACTGTTATGTAAGAAGATTTTTCAATGCTTAGAACAATATTGTTAAATTGTCAAAATACAAAGAGCCACATCGTGGGGCACCATTTTCTTTTCA

Coding sequence (CDS)

ATGGCCGGAAAGCAAGTTTCCGGCGCCGGTCTGCCGGAGAGCATTGCAGGAATGTCGAAGAACCAACTATATGATATCATGTCTCAAATGAAGACACTGATCGAACAGAATCAGCAGCAGGCGAAACAAATCCTCATCCAAAACCCCCTACTAACCAAAGCTCTTTTCCAGGCACAAATAATGCTTGGGATGGTACGGCCGCCTCAGGTTCCAAGCATTCAGCCTTCAGCCTCCCAGCATTCTCAGCCATCAACACAGGCAACTCAACAATCAAATCTTCAGCCTACTCAAACATCCGCTCCTCAAATAAGTTTGCAAGAACAGACAAGTGCACCACCTTTGGCCCCCCCTAGAAAACAGTATCAGAACCAACCATCAATGCCTATCTCATCGACTACTCTTCCTACTGCAAACATTCAGCCTCGGCCAACACCTCTGATTCCCCTACAGACACCGCAGCATCCCAAGGGATTTGATGTCCCCCAAGCAAATCCCATTTCTGTCCCACAACCCTCTCAAATTCCAAGTGTATCTCCAATTCTTCCATCTGCTGCTCAGCCACCTTTACTTCATCAACCTCAGATTTCAACGGCCTCCATGCAGCTGCAGCAGCCATTACAAACAGCCGAAGTTCACCACCTGCCTCCACAGGCACCATTACCCCCACATTCCAGGCCACCTACGGGTCCAAATTTCCACCAGCACTACCCCCCTCAAATGGGCCACAATATGAATTACCAACCTCCTGGCATCCCACAGCATGTTTCACAACCCATGTTTCATTCAGGTACCAAACTCCCTCCTGGCCTAGGAAATTCATTTCCCCAAGGACAGTCTGGACTACCTAGTCAGCCACCACCCCCTCAATCAATGTATCAGGCTGGAGGTTCTAAATTAGGTACAGAATTCATGAATCAAGTTGGAACTTCAAAGCCTGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAAAACCCTACACTTCCACAGCAACTATCCGGACCACCACCTATACCATCGGTTCCTGGTGGTCAGATGGGCCCTAACAATCAACCTCGTCCAGCACCGCCGTTGAGTCAGGAGATGGAAAAGATGTTACTTCAACAAGTCATGAGTCTCACACCCGAACAAATTAATCTCCTTCCTCCCGAGCAAAGGAATCAAGTGCTTCAACTACAGAAGATATTGCGCCAATGA

Protein sequence

MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQYQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPILPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQMGHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

Homology

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BLAST of MELO3C002087.jh1 vs. NCBI nr
Match: XP_008458086.1 (PREDICTED: extensin [Cucumis melo])

HSP 1 Score: 756 bits (1953), Expect = 5.81e-275
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

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BLAST of MELO3C002087.jh1 vs. NCBI nr
Match: XP_011650532.1 (leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN64120.1 hypothetical protein Csa_013340 [Cucumis sativus])

HSP 1 Score: 749 bits (1935), Expect = 3.22e-272
Identity = 394/398 (98.99%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAP RKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPSRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFD+PQANPISVPQPSQIPSVSPI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDIPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASMQLQQPLQTAE+HHLPPQA LPPHSRPPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEIHHLPPQAQLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of MELO3C002087.jh1 vs. NCBI nr
Match: XP_038894222.1 (cleavage stimulating factor 64 [Benincasa hispida])

HSP 1 Score: 716 bits (1849), Expect = 3.80e-259
Identity = 380/398 (95.48%), Postives = 389/398 (97.74%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQ+PSIQPSASQHSQPSTQATQQSN+QPTQTSAPQISLQEQTSAP LAP RKQ
Sbjct: 61  MLGMVRPPQIPSIQPSASQHSQPSTQATQQSNIQPTQTSAPQISLQEQTSAPSLAPSRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMPISSTTLPT NIQPR TPLIPLQTPQHPKGFD+PQ+NPISVPQPSQIPSVSP+
Sbjct: 121 YQNQPSMPISSTTLPTVNIQPRSTPLIPLQTPQHPKGFDIPQSNPISVPQPSQIPSVSPM 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPS+AQPPLLHQPQ+STASMQLQQPLQTAE+HHLPPQAPLPPHSR PTGPNFHQHYPPQM
Sbjct: 181 LPSSAQPPLLHQPQVSTASMQLQQPLQTAEIHHLPPQAPLPPHSRAPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSF QGQSGLPSQPPP QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFLQGQSGLPSQPPP-QSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPP+PSVPG  MGPNNQPRPAPPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPVPSVPG-PMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MELO3C002087.jh1 vs. NCBI nr
Match: XP_023519984.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673 bits (1736), Expect = 6.23e-242
Identity = 358/398 (89.95%), Postives = 373/398 (93.72%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQPST  TQQSN+QPTQTSA QI+LQEQTS PPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMP+SSTTLPT NIQPR  PLIPLQTPQHPKGFD+PQANP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLPP APLP HSR PTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSFP GQS LPSQPPP QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPPP-QSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPPPIPSV  GQM P NQPR APPLSQ
Sbjct: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSV-LGQMAPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MELO3C002087.jh1 vs. NCBI nr
Match: XP_022924107.1 (proline-rich protein 36-like [Cucurbita moschata])

HSP 1 Score: 673 bits (1736), Expect = 6.23e-242
Identity = 359/398 (90.20%), Postives = 372/398 (93.47%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQP T  TQQSN+QPTQTSA QISLQEQTS PPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMP+SSTTLPT NIQPR  PLIPLQTPQHPKGFD+PQANP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLPP APLP HSR PTGPNFHQHYPPQ+
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQI 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSFP GQS LPSQP P QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPAP-QSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQLSGPPPIPSV  GQMGP NQPR APPLSQ
Sbjct: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSV-LGQMGPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MELO3C002087.jh1 vs. ExPASy Swiss-Prot
Match: Q9M9G6 (Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-07
Identity = 106/393 (26.97%), Postives = 155/393 (39.44%), Query Frame = 0


Query: 15  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP--QVPS 74
           +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P   Q P+
Sbjct: 171 LAKMSRSQLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPN 230

Query: 75  IQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQYQNQPSMPISST 134
           I  + S  +  S Q  Q               L  Q   PPLA   +Q    P       
Sbjct: 231 IVQAPSHMTGSSIQDAQ---------------LSGQNLLPPLAQRSQQLSRAPHSQ---- 290

Query: 135 TLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPILPSAAQPPLLHQ 194
                          P+Q         +PQ     V QP          PS+  PP   Q
Sbjct: 291 --------------YPVQQSSKQPFSQIPQL----VAQPG---------PSSVNPPPRSQ 350

Query: 195 PQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQMGHNMNYQPP-GI 254
            ++  A  Q QQ +  +                                 N+ Y     +
Sbjct: 351 VKVENAPFQRQQVVPAST--------------------------------NIGYSSQNSV 410

Query: 255 PQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLGTEFMNQVGTSK 314
           P +  QP                    S +P Q   P S+ Q GG  +   F       K
Sbjct: 411 PNNAIQP--------------------SQVPHQ-ALPNSVMQQGGQTVSLNF------GK 454

Query: 315 PADRGPWMPGPPENPTLPQQLSGPPP--IPSVPGG----QMGPNNQPRPAPPLSQEMEKM 374
             + GP    P ++   P ++         S+PGG     M PN    P   +S +++  
Sbjct: 471 RINEGP----PHQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQST 454

Query: 375 LLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 399
           LLQQVM+LTPEQ+ LL PEQ+ +VL+LQ+ L+Q
Sbjct: 531 LLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQ 454

[Close]

BLAST of MELO3C002087.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C700 (extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1)

HSP 1 Score: 756 bits (1953), Expect = 2.81e-275
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of MELO3C002087.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LQD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042320 PE=4 SV=1)

HSP 1 Score: 749 bits (1935), Expect = 1.56e-272
Identity = 394/398 (98.99%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAP RKQ
Sbjct: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPSRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFD+PQANPISVPQPSQIPSVSPI
Sbjct: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDIPQANPISVPQPSQIPSVSPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTASMQLQQPLQTAE+HHLPPQA LPPHSRPPTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEIHHLPPQAQLPPHSRPPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ
Sbjct: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of MELO3C002087.jh1 vs. ExPASy TrEMBL
Match: A0A6J1E818 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 SV=1)

HSP 1 Score: 673 bits (1736), Expect = 3.01e-242
Identity = 359/398 (90.20%), Postives = 372/398 (93.47%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQP T  TQQSN+QPTQTSA QISLQEQTS PPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMP+SSTTLPT NIQPR  PLIPLQTPQHPKGFD+PQANP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLPP APLP HSR PTGPNFHQHYPPQ+
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQI 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSFP GQS LPSQP P QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPPGQSALPSQPAP-QSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQVG+SKPADRGPWMPGPPENPT PQQLSGPPPIPSV  GQMGP NQPR APPLSQ
Sbjct: 301 TEFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSV-LGQMGPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MELO3C002087.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KF43 (cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111495242 PE=4 SV=1)

HSP 1 Score: 670 bits (1728), Expect = 4.99e-241
Identity = 357/398 (89.70%), Postives = 371/398 (93.22%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQ+PS+ PSASQHSQPST  TQQSN+QPTQTSA QISLQEQTS PPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMP+SS+TLPT NIQPR  PLIPLQTPQHPKGFD+PQ NP S PQPSQIP+V PI
Sbjct: 121 YQNQPSMPVSSSTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQTNPSSAPQPSQIPNVPPI 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLPP APLP HSR PTGPNFHQHYPPQM
Sbjct: 181 LPSAAQPPLLHQPQISTASIQLQQPLQTAEISHLPPPAPLPSHSRAPTGPNFHQHYPPQM 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLG 300
           GHNMNYQPPGIPQHVSQP+FHSGTKLPPG+GNSF  GQS LPSQPPP QSMYQAGGSKLG
Sbjct: 241 GHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFAPGQSALPSQPPP-QSMYQAGGSKLG 300

Query: 301 TEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLSQ 360
           TEFMNQV +SKPADRGPWMPGPPENPT PQQLSGPPPIPSV  GQMGP NQPR APPLSQ
Sbjct: 301 TEFMNQVASSKPADRGPWMPGPPENPTHPQQLSGPPPIPSV-LGQMGPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MELO3C002087.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C742 (RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603 PE=4 SV=1)

HSP 1 Score: 661 bits (1706), Expect = 1.08e-237
Identity = 357/399 (89.47%), Postives = 372/399 (93.23%), Query Frame = 0


Query: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVPSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQ 120
           MLGMVRPPQ+PSIQPS S HSQPST  T QSN+QPTQT A QISLQEQT+APPLAPPRKQ
Sbjct: 61  MLGMVRPPQIPSIQPSTSHHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRKQ 120

Query: 121 YQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPI 180
           YQNQPSMPISSTTLPT N+QP+  PLIPLQTPQHPKGF++ QANPISVPQPSQ+PSV P+
Sbjct: 121 YQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPV 180

Query: 181 LPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQM 240
           LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLP QAPLPP SR PTGPNFHQHYP Q+
Sbjct: 181 LPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQV 240

Query: 241 GHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSFP-QGQSGLPSQPPPPQSMYQAGGSKL 300
           GHNMNYQP GIPQHVSQPMFHSGTKLPPG+GNSFP QGQS +PSQPPP QSMYQAGGSKL
Sbjct: 241 GHNMNYQPAGIPQHVSQPMFHSGTKLPPGIGNSFPPQGQSAVPSQPPP-QSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPLS 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPP  SVPG QMGP NQPRPAPPLS
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPP--SVPG-QMGPGNQPRPAPPLS 360

Query: 361 QEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398
           QEMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 361 QEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of MELO3C002087.jh1 vs. TAIR 10
Match: AT1G73840.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-62
Identity = 200/413 (48.43%), Postives = 242/413 (58.60%), Query Frame = 0


Query: 1   MAGKQVSG-AGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQ 60
           MAGKQ+ G  GLP ++AGM+K+QLYDIMSQMKTLI+QN QQA++ILI+NPLLTKALFQAQ
Sbjct: 1   MAGKQIGGDGGLPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQ 60

Query: 61  IMLGMVRPPQV-PSIQPSASQHSQPSTQA-TQQSNLQPTQTS-APQISLQEQTSA-PPLA 120
           IMLGMV+PPQV P ++P A Q  Q S Q+   + N+Q   +S     S+ E  +   P A
Sbjct: 61  IMLGMVQPPQVTPKVEPQAVQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQA 120

Query: 121 PPRKQYQNQP---SMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPS 180
           P RK    QP     P  S +  +A  QPR         PQ  +G   P    +S PQ S
Sbjct: 121 PIRKHPTPQPMPMPPPPPSVSANSAQSQPR------FSHPQR-QGHLNPAVTSMSHPQSS 180

Query: 181 QIPSVSPIL---PSAAQPPLLHQPQISTASMQL-QQPLQTAEVHHLPPQAPLPPHSRPPT 240
           Q+ +  P     P++ QPP  H   I  +S QL QQP+ +    H+  Q   P H     
Sbjct: 181 QVQNAPPPASHHPTSQQPP-FHHLDIPASSTQLQQQPMHSGGGPHVAQQQSRPYH----- 240

Query: 241 GPNFHQHYPPQMGHNMNYQPPGIP-QHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPP 300
               HQ+   Q G N  +Q  G P QH+SQPM+HSG + P   G  FPQGQ  LPSQP  
Sbjct: 241 ----HQYGQAQTGPNTGFQHHGAPTQHLSQPMYHSGNRPPASGGPQFPQGQPHLPSQP-- 300

Query: 301 PQSMYQAGGSKLGTEFMNQVGTSKPADRGP-WMPGPPENPTLPQQLSGPPPIPSVPGGQM 360
               YQ GG   G    NQ+      DRGP WM G  E+  +   L G  P+P  P  Q+
Sbjct: 301 ---TYQGGGQYRGDYNNNQLAGLMAQDRGPSWMAGQSESSNI-THLPGLGPVP--PPSQV 360

Query: 361 GPNNQPRPAP-PLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 399
           GP   P P P P+S EMEK LLQQVMSLTPEQINLLPPEQRNQVLQLQ+ILRQ
Sbjct: 361 GPGGGPPPRPAPISAEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQILRQ 388

[Close]

BLAST of MELO3C002087.jh1 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 58.2 bits (139), Expect = 1.8e-08
Identity = 106/393 (26.97%), Postives = 155/393 (39.44%), Query Frame = 0


Query: 15  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPP--QVPS 74
           +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P   Q P+
Sbjct: 171 LAKMSRSQLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPN 230

Query: 75  IQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRKQYQNQPSMPISST 134
           I  + S  +  S Q  Q               L  Q   PPLA   +Q    P       
Sbjct: 231 IVQAPSHMTGSSIQDAQ---------------LSGQNLLPPLAQRSQQLSRAPHSQ---- 290

Query: 135 TLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSPILPSAAQPPLLHQ 194
                          P+Q         +PQ     V QP          PS+  PP   Q
Sbjct: 291 --------------YPVQQSSKQPFSQIPQL----VAQPG---------PSSVNPPPRSQ 350

Query: 195 PQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQMGHNMNYQPP-GI 254
            ++  A  Q QQ +  +                                 N+ Y     +
Sbjct: 351 VKVENAPFQRQQVVPAST--------------------------------NIGYSSQNSV 410

Query: 255 PQHVSQPMFHSGTKLPPGLGNSFPQGQSGLPSQPPPPQSMYQAGGSKLGTEFMNQVGTSK 314
           P +  QP                    S +P Q   P S+ Q GG  +   F       K
Sbjct: 411 PNNAIQP--------------------SQVPHQ-ALPNSVMQQGGQTVSLNF------GK 454

Query: 315 PADRGPWMPGPPENPTLPQQLSGPPP--IPSVPGG----QMGPNNQPRPAPPLSQEMEKM 374
             + GP    P ++   P ++         S+PGG     M PN    P   +S +++  
Sbjct: 471 RINEGP----PHQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQST 454

Query: 375 LLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 399
           LLQQVM+LTPEQ+ LL PEQ+ +VL+LQ+ L+Q
Sbjct: 531 LLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQ 454

The following BLAST results are available for this feature:

BLAST of MELO3C002087.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458086.1	5.81e-275	100.00	PREDICTED: extensin [Cucumis melo]	[more]
XP_011650532.1	3.22e-272	98.99	leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN64120.1 hypoth...	[more]
XP_038894222.1	3.80e-259	95.48	cleavage stimulating factor 64 [Benincasa hispida]	[more]
XP_023519984.1	6.23e-242	89.95	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]
XP_022924107.1	6.23e-242	90.20	proline-rich protein 36-like [Cucurbita moschata]	[more]

BLAST of MELO3C002087.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G6	2.5e-07	26.97	Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV...	[more]

BLAST of MELO3C002087.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C700	2.81e-275	100.00	extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1	[more]
A0A0A0LQD8	1.56e-272	98.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042320 PE=4 SV=1	[more]
A0A6J1E818	3.01e-242	90.20	proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 ...	[more]
A0A6J1KF43	4.99e-241	89.70	cleavage stimulating factor 64 OS=Cucurbita maxima OX=3661 GN=LOC111495242 PE=4 ...	[more]
A0A6J1C742	1.08e-237	89.47	RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603...	[more]

BLAST of MELO3C002087.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73840.1	1.7e-62	48.43	hydroxyproline-rich glycoprotein family protein	[more]
AT1G71800.1	1.8e-08	26.97	cleavage stimulating factor 64	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	GENE3D	1.10.20.70		coord: 358..398 e-value: 2.2E-12 score: 48.1
None	No IPR available	GENE3D	1.25.40.630		coord: 6..73 e-value: 6.7E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..355
None	No IPR available	PANTHER	PTHR47866	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 1..398
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 15..73 e-value: 1.3E-15 score: 57.5
IPR026896	Transcription termination and cleavage factor, C-terminal domain	PFAM	PF14304	CSTF_C	coord: 366..395 e-value: 4.9E-9 score: 35.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002087.jh1.t1	MELO3C002087.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing