MELO3C002045 (gene) Melon (DHL92) v4

Overview
NameMELO3C002045
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCleavage stimulation factor 50 kDa subunit
Locationchr12: 25272751 .. 25277409 (+)
RNA-Seq ExpressionMELO3C002045
SyntenyMELO3C002045
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGATGAAAAATCCCCCAAATACCTTCCAATTTTCAATTTTTTTAGTAACCATTTTCTCTTTTTTTCCATCTTCTATTTCCTAAAACCTCCACACATCCCGTATTTATGATGGGGCTCTGAACCGTGAAGAATCCGAGAGTGGAGTTGGAGTTGGAGTGGAGCAGGGAGCTAGCAGTCGGGGTGCTAAACTGAAATAACTGAGGTATTGTTTCGAAGGAGGAGATGGAAGGCAGCTTCGAACAGACCCTTCAAGATGGAAAGCTTTATAGACAAGTCAATTCTCTCATTGTCGCTCATCTTCGTGATCACAACCTCACCCAGGCAAGCTTTTCTCTTCGAGTTTTTAATTATTAAGCATCTGGGTCACCTCATTTCAGATTTTGTATATCGAGTTTGGTTTCTGTTTCGATTTGCTTAGTAAAAGTTTTGTGCTTTTTGTTCTCCTTTGAAGTCCTCGTGGTTCCTAGAAATTGAAGATTTCAAATTGAAGTAATTTTGAGTTAGTACATGAGAGGGAACATTATGATATAAGTATATAACTATGATATGTATGTAGGCTGCAAGTGCTGCTGCTTCAGCTACAATGACACCGCTGAATGTTGATATCCCACCTAAAAAGCTTATGGAGCTCGTTGCAAAGGTCTGAATTTGTTGACTAGAATCTTTTTGTCCAAGCCTTTTTGAGTTTGGGGTTGCTAAGTGCAAGTTTCTGTATTAAGGTGATACCAGGGTCTTGCGGTGGAGAAGGATGAGACGTTAAGAGGGAGTCCTGCTTCTGCATTGTATGAATTTGGTTCATCAGTGCCCACTACATTTGGATCTGCACAGCCCTCTCGTGCTTCTGCCATCAACTTCAGGTTGTAAAGCTTTTCCATGATACAGTGTTGATCGTCTTGGGATTCAATGTGTCATGTATTGCAGTTTCTTGTGTACGATTTGTGAAAGCAGAAGTAATCCAACAACCTTCTTTTGATTCTTCTTCTTTTTGTTTCCTTGGGACAGCACTACACAGGATACAAAAGTTTCTTCGAAGAATTTTCCAAAGCACGAGACTCGACATCTTTCCGAGCATAAGGTGATAAACTAAACTCAACACTTTTTCTGTATGATGTTTAGACTCGTGTTGAGAGGAAATGAGTTGTTGGCCTGAAATTTTGTTACTCTTTGCAGGCTTGGTAAGGCTTAGATTTTGAGTGAGAGAGAGCCCTTTATTTAGCTTGCGTCCTTTGTACTTGTATTATATTTGTTTTCAAGAACATTGTCTTGTATTGGTGGATAGATCCTACACCGACATACATATTGGTTATATATAGGCTGGAGGAATAGATTTTATTACTGTCAAATTTAATGCATATGTTTATGTTTGTTGGAGTTCGATTATTGTATATTCTTTCTGGGCTGATAGCTTAAACTTTTCTAGAATGTTGCCAGATGTGCAAGATTCAGTGCTGATGGGAGATTTGTTGCAACTGGAAGCGCGGATATGTCAATAAAGCTGTTTGAGGTATTGGTGCTTTTTCTTTAAGTTGTTTGATGGTTTACTTCAATCAACATGAGATCTGACTAACAATCCATTTTTCTTAAGGTGGCAAAGATCAAGCAGATGATGCTGCCAGATGCAAAAGATGGTCCTGTCCGACCGGTTATAAGGACATTTTATGATCACATTCAAGTTAGTCTTTTACATCACATTCATGAAACCCATATGTGCTATGCTGATAGTTTTTTCACCCCCCACATCGTGTATAAGTAAAGAAGCAATTTTTCTCAAAAAAATAAAAATAAAAAAAATAAAAAAAAAAAAGATTTATGTTTTCTCCCTGCCTTCACAACTGCTAAGAGCATTTATGTTTTAAATTTTTTGGTTGTTCAGTGTTGCTATCTAAACTTTTTGCATCAAGGGAAGGGAACATGATTTTTTTTTCTTTTTGACCAGGAAAAGGATTTTAGTTCTTTACATCACTCTTTCTTCATTGTTCTAATCTGTGTATGTTTCTGTATTATCAGTTAAAGTTTTTTCTCCGTCGATGATTAATTCTTCTCCTAATTAATTGCAGCCAATAAATGATTTAGATTTTCATCCTCAGAATACTGTTCTTGTATCTGGTGCAAAAGACCACACAATAAAGTATGGTTCTTTCTTGATGCATTTTACCTGAGGTCGTTTGTGCGAGAGAGTAGCTCCTTACCTTATTATTATCAGTATTCAGTAGTAATATCTTATTTACGACTATCAAAGTTCCAAATTTAATCTAGAGGTCATGATTGTCTTTGGCATCTTTAAACTTACAATTTCAATTCTGAAGATACTATTCTATTGGTAAATGAAGTATAACTGATCCTAGAAATTTGTACAATGCTTTCTTTTCCAGGTTCTTTGACTTCTCCAAATTGACTGCAAAAAAAGCATTTAGAGTTATCCAGGTTTTGCTTGTACCTTATTGTACAATTTGGCTGCAGCTTTTAAATCCTTCAGCAAATTTCGCTTCTTTTACTTCAGAAGGCATTCTCTTAAATTCTTCCTTCTGTTTGTCATTAAGGATACTCATAACGTGCGATCTATATCTCTTCATCCTTCAGGAGATCATCTCTTAGCAGGTACCATCTTCTTCCTTTTCATCAATTGATAGCTGAACTGTTCTTTGCATTTTGATATTTGAAAGCATGCAAGTACTGTTCTTTGTTAATTGAAATTAAATTAGATTGTATAATAAACTTGAATTCTATAACCAAGCTTTCCTCTCATTTCATAATTTTTTTTTCCTTTGCTAATTAAGTGAATATATACGTGTATCCCTCTATGACTTTTTTCCCCTCTTCTATTAAGAGAAGTAAAAAGGAACAAAACATTGCGATAGAGGGCTAGTTAAGCTAGCTGCCATCCACCTTCCAAAACTGACAGCTCGGTTTAGGCTTTGCTTTTATAATTGACTGGAGAGAGAAAGGTTCTATTAAACTGTCATTTTCTCTATCCTTTTCGTGTTCCTCTTTGATACATTTTTTGAATTAGTTCTTGTATCTTTAGGTGCTTTGGGGTTTTCTCCTGGTTGCATTTATGAATGAAATGTTTCTTTATCCAAAAAAAATATATATATTAATTAGTAATTTGACGAAGTTCTCATTTTGAAAAGTAATTACTATAACAACTAACAAACTGATCCTAAATTCAATACAACAAAAAATGGTTACAACGGAATTAGCTCCAATAGCTCAGTCCTACTCTTACTAGTTCGGTCCAAGTTCCACCACTACTAGCTGATCTTTAGACCTAAAATTTAATGAAACCAAATGAGAAGAGGTTGGTGCCTCATTATTCTGACATGGATGAAAACTTCAGGAACGGATCATCAGATTGCGCACTTGTATGATGTCAATACTTTTCAGTGTTTTCTATCTGCAAATGTTCCTGAAATAGGAAATAATGGAGCCATAAATCAGGTGCCGTGAACTTCATTTTTTCAAAATTTTCCACAATCCAAATCCTCTTAGATGTAAATGGAACTATCACAGTTCATGCTTAATGATTATACAGATCAGGTATTCGGCAACTGGTAGTATGTATGTCACTGCTTCGAAAGACGGCGCAGTTCGTTTATGGGACGGCATTAGTGCAAAATGTATCCGGTCCATTGTTAGTGCACATGGCACAGCAGAGGCAACCAGTGCAAAATTTACAAAGGATGAAAGGTAATCTTGCAACAATCATAATGGGTTATTCCAATGTATGCGATTTTGTTACTTGCCTCCACAGTTCTGAGAGAATGTTTTTGATATTTCTATTGGTTTCTTGAGTTTTGTTCAATGATTTAATCATGAATATCTCAGGTATGTTCTTTCTTGTGGAAAGGACTCGAGTGTAAAGCTATGGGACGTGGGGACCGGGAGACTAGTCAAACAATATGTTGGTGCTACTCATATGCAATTGAGGTGTCAGGTCTGGTTTCATTTCAAAAAGCTTCTTTTTTTTTGGGAGATTTTCCATAACTGGAACAATGGAACTCATTCATGTGTTTGCAAACGTTTCCAAATCATGGGAGTCACCCTCTAAAGATTTAATATCTTATGAGTTTCTTTGGTAACCAAATATAGTAGGGTTTTGAAAGTCTAACTCTAAGCTCAAATTTGTAATCACAAAATTCTGATGAGCTGTTTACATTTCCATCTGACATTTAATAATTTTTTTATGTTAGGCTGTATTCAATGATACTGAGGAGTTTGTGCTATCAATAGACGAACCAAGCAATGAGGTTGATCCTGCTTTTCTTCTCTTCTGAGAACTGTGACATTGATGTCCTTTGATAGCCTATGTTTTGAATCAGAATTGACAAGATTTAAATGTTTGCAGATCGTTATCTGGGATGCTTTGACAGCAGAGAGAGTAGCAAGGTGGCCTTCTAACCATGTCGGTGCACCTCGATGGCTCGAGCACTCACCAACAGAGTCGGCCTTCATTTCCTGCGGGACTGATAAATCAATACGTTTTTGGAAGGAAACTCTCTAGTGTAGAGTAGAAGATGATTATTTCATCCTCCAATCTAAATGGACTGATTAAGGGCTAAAGTCCATATTGCATAAGTATCCTAATTTGCTATTTACATGAATGGAAAACGGGTCTCATAATTTCATTAATGTTAAGGCTCAAATACTATTATGCCCTT

mRNA sequence

ACGATGAAAAATCCCCCAAATACCTTCCAATTTTCAATTTTTTTAGTAACCATTTTCTCTTTTTTTCCATCTTCTATTTCCTAAAACCTCCACACATCCCGTATTTATGATGGGGCTCTGAACCGTGAAGAATCCGAGAGTGGAGTTGGAGTTGGAGTGGAGCAGGGAGCTAGCAGTCGGGGTGCTAAACTGAAATAACTGAGGTATTGTTTCGAAGGAGGAGATGGAAGGCAGCTTCGAACAGACCCTTCAAGATGGAAAGCTTTATAGACAAGTCAATTCTCTCATTGTCGCTCATCTTCGTGATCACAACCTCACCCAGGCTGCAAGTGCTGCTGCTTCAGCTACAATGACACCGCTGAATGTTGATATCCCACCTAAAAAGCTTATGGAGCTCGTTGCAAAGGGTCTTGCGGTGGAGAAGGATGAGACGTTAAGAGGGAGTCCTGCTTCTGCATTGTATGAATTTGGTTCATCAGTGCCCACTACATTTGGATCTGCACAGCCCTCTCGTGCTTCTGCCATCAACTTCAGCACTACACAGGATACAAAAGTTTCTTCGAAGAATTTTCCAAAGCACGAGACTCGACATCTTTCCGAGCATAAGAATGTTGCCAGATGTGCAAGATTCAGTGCTGATGGGAGATTTGTTGCAACTGGAAGCGCGGATATGTCAATAAAGCTGTTTGAGGTGGCAAAGATCAAGCAGATGATGCTGCCAGATGCAAAAGATGGTCCTGTCCGACCGGTTATAAGGACATTTTATGATCACATTCAACCAATAAATGATTTAGATTTTCATCCTCAGAATACTGTTCTTGTATCTGGTGCAAAAGACCACACAATAAAGTTCTTTGACTTCTCCAAATTGACTGCAAAAAAAGCATTTAGAGTTATCCAGGATACTCATAACGTGCGATCTATATCTCTTCATCCTTCAGGAGATCATCTCTTAGCAGGAACGGATCATCAGATTGCGCACTTGTATGATGTCAATACTTTTCAGTGTTTTCTATCTGCAAATGTTCCTGAAATAGGAAATAATGGAGCCATAAATCAGATCAGGTATTCGGCAACTGGTAGTATGTATGTCACTGCTTCGAAAGACGGCGCAGTTCGTTTATGGGACGGCATTAGTGCAAAATGTATCCGGTCCATTGTTAGTGCACATGGCACAGCAGAGGCAACCAGTGCAAAATTTACAAAGGATGAAAGGTATGTTCTTTCTTGTGGAAAGGACTCGAGTGTAAAGCTATGGGACGTGGGGACCGGGAGACTAGTCAAACAATATGTTGGTGCTACTCATATGCAATTGAGGTGTCAGGCTGTATTCAATGATACTGAGGAGTTTGTGCTATCAATAGACGAACCAAGCAATGAGATCGTTATCTGGGATGCTTTGACAGCAGAGAGAGTAGCAAGGTGGCCTTCTAACCATGTCGGTGCACCTCGATGGCTCGAGCACTCACCAACAGAGTCGGCCTTCATTTCCTGCGGGACTGATAAATCAATACGTTTTTGGAAGGAAACTCTCTAGTGTAGAGTAGAAGATGATTATTTCATCCTCCAATCTAAATGGACTGATTAAGGGCTAAAGTCCATATTGCATAAGTATCCTAATTTGCTATTTACATGAATGGAAAACGGGTCTCATAATTTCATTAATGTTAAGGCTCAAATACTATTATGCCCTT

Coding sequence (CDS)

ATGGAAGGCAGCTTCGAACAGACCCTTCAAGATGGAAAGCTTTATAGACAAGTCAATTCTCTCATTGTCGCTCATCTTCGTGATCACAACCTCACCCAGGCTGCAAGTGCTGCTGCTTCAGCTACAATGACACCGCTGAATGTTGATATCCCACCTAAAAAGCTTATGGAGCTCGTTGCAAAGGGTCTTGCGGTGGAGAAGGATGAGACGTTAAGAGGGAGTCCTGCTTCTGCATTGTATGAATTTGGTTCATCAGTGCCCACTACATTTGGATCTGCACAGCCCTCTCGTGCTTCTGCCATCAACTTCAGCACTACACAGGATACAAAAGTTTCTTCGAAGAATTTTCCAAAGCACGAGACTCGACATCTTTCCGAGCATAAGAATGTTGCCAGATGTGCAAGATTCAGTGCTGATGGGAGATTTGTTGCAACTGGAAGCGCGGATATGTCAATAAAGCTGTTTGAGGTGGCAAAGATCAAGCAGATGATGCTGCCAGATGCAAAAGATGGTCCTGTCCGACCGGTTATAAGGACATTTTATGATCACATTCAACCAATAAATGATTTAGATTTTCATCCTCAGAATACTGTTCTTGTATCTGGTGCAAAAGACCACACAATAAAGTTCTTTGACTTCTCCAAATTGACTGCAAAAAAAGCATTTAGAGTTATCCAGGATACTCATAACGTGCGATCTATATCTCTTCATCCTTCAGGAGATCATCTCTTAGCAGGAACGGATCATCAGATTGCGCACTTGTATGATGTCAATACTTTTCAGTGTTTTCTATCTGCAAATGTTCCTGAAATAGGAAATAATGGAGCCATAAATCAGATCAGGTATTCGGCAACTGGTAGTATGTATGTCACTGCTTCGAAAGACGGCGCAGTTCGTTTATGGGACGGCATTAGTGCAAAATGTATCCGGTCCATTGTTAGTGCACATGGCACAGCAGAGGCAACCAGTGCAAAATTTACAAAGGATGAAAGGTATGTTCTTTCTTGTGGAAAGGACTCGAGTGTAAAGCTATGGGACGTGGGGACCGGGAGACTAGTCAAACAATATGTTGGTGCTACTCATATGCAATTGAGGTGTCAGGCTGTATTCAATGATACTGAGGAGTTTGTGCTATCAATAGACGAACCAAGCAATGAGATCGTTATCTGGGATGCTTTGACAGCAGAGAGAGTAGCAAGGTGGCCTTCTAACCATGTCGGTGCACCTCGATGGCTCGAGCACTCACCAACAGAGTCGGCCTTCATTTCCTGCGGGACTGATAAATCAATACGTTTTTGGAAGGAAACTCTCTAG

Protein sequence

MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKETL
Homology
[Close]
BLAST of MELO3C002045 vs. ExPASy Swiss-Prot
Match: Q8L4J2 (Cleavage stimulation factor subunit 50 OS=Arabidopsis thaliana OX=3702 GN=CSTF50 PE=1 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 3.0e-171
Identity = 287/435 (65.98%), Postives = 359/435 (82.53%), Query Frame = 0 

Query: 3   GSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKG 62
           G  EQ LQDG ++RQ+N+LIVAHLR HNL+Q ASA ASATMTPLN+++PP +L+ELVAKG
Sbjct: 5   GDLEQALQDGNIFRQLNALIVAHLRHHNLSQVASAVASATMTPLNIEVPPNRLLELVAKG 64

Query: 63  LAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETR 122
           LA E + TLRG  +S L      +P+++GS    R ++I+FS     K SSK  PKHE++
Sbjct: 65  LAAENNGTLRGVSSSVL------LPSSYGSITTPRTASIDFSVNH-AKGSSKTIPKHESK 124

Query: 123 HLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYD 182
            LSEHK+V RCARFS DG F ATG AD SIKLFEV K+KQM+  D +    RP+IRTFYD
Sbjct: 125 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQ---ARPLIRTFYD 184

Query: 183 HIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDH 242
           H +PINDLDFHP++T+L+S AKD+ IKFFDFSK TAK+AF+V QDTHNVRSIS HPSG+ 
Sbjct: 185 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 244

Query: 243 LLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWD 302
           LLAGTDH I HLYDVNT+QCFL +N P+ G +GAINQ+RYS+TGS+Y+TASKDGA+RL+D
Sbjct: 245 LLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFD 304

Query: 303 GISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHM 362
           G+SAKC+RSI +AHG +E TSA FTKD+R+VLS GKDS+VKLW++G+GR+VK+Y+GA  +
Sbjct: 305 GVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRV 364

Query: 363 QLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFI 422
           +LR QA+FNDTEEFV+SIDE SNE+V WDA TA++VA+WPSNH GAPRW+EHSP ES F+
Sbjct: 365 KLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFV 424

Query: 423 SCGTDKSIRFWKETL 438
           +CG D+SIRFWKE++
Sbjct: 425 TCGIDRSIRFWKESV 429

[Close]
BLAST of MELO3C002045 vs. ExPASy Swiss-Prot
Match: Q05048 (Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.7e-79
Identity = 168/430 (39.07%), Postives = 243/430 (56.51%), Query Frame = 0 

Query: 16  RQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSP 75
           +Q+  LI++ L        A+   +  + P +V  P ++L+ L+  G+  E D+T     
Sbjct: 12  QQLYKLIISQLLYDGYISIANGLIN-EIKPQSVCAPSEQLLHLIKLGM--ENDDT----- 71

Query: 76  ASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCAR 135
            +  Y  G S     G       + I+     D +  S    ++ET +++ HK   R A 
Sbjct: 72  -AVQYAIGRSDTVAPG-------TGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVAT 131

Query: 136 FSADGRFVATGSADMSIKLFEVAK--------IKQMMLPDAKDG-PVRPVIRTFYDHIQP 195
           +S DG+ +ATGSAD SIK+ +  +        I+ MM   A+      PVIRT YDH+  
Sbjct: 132 YSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDE 191

Query: 196 INDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDHLLAG 255
           +  L FHP   +L SG++D+T+K FD+SK +AK+AF+ IQ+   +RSIS HPSGD +L G
Sbjct: 192 VTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVG 251

Query: 256 TDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGISA 315
           T H    LYD+NTFQCF+S N P+  +  AI  + Y+++ +MYVT SKDG ++LWDG+S 
Sbjct: 252 TQHPTLRLYDINTFQCFVSCN-PQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSN 311

Query: 316 KCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGA---THMQ 375
           +CI +   AH  AE  SA F+K+ +Y+LS GKDS  KLW++ TGR + +Y GA       
Sbjct: 312 RCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQV 371

Query: 376 LRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFIS 434
            R QAVFN TE++VL  DE +  +  WD+ TAER       H    R + HSPT   F++
Sbjct: 372 HRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMT 424

[Close]
BLAST of MELO3C002045 vs. ExPASy Swiss-Prot
Match: Q99LC2 (Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-78
Identity = 167/430 (38.84%), Postives = 242/430 (56.28%), Query Frame = 0 

Query: 16  RQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSP 75
           +Q+  LI++ L        A+   +  + P +V  P ++L+ L+  G+  E D+T     
Sbjct: 12  QQLYKLIISQLLYDGYISIANGLIN-EIKPQSVCAPSEQLLHLIKLGM--ENDDT----- 71

Query: 76  ASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCAR 135
            +  Y  G S     G       + I+     D +  S    ++ET +++ HK   R A 
Sbjct: 72  -AVQYAIGRSDTVAPG-------TGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVAT 131

Query: 136 FSADGRFVATGSADMSIKLFEVAK--------IKQMMLPDAKDG-PVRPVIRTFYDHIQP 195
           +S DG+ +ATGSAD SIK+ +  +        I+ MM   A+      PVIRT YDH+  
Sbjct: 132 YSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDE 191

Query: 196 INDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDHLLAG 255
           +  L FHP   +L SG++D+T+K FD+SK +AK+AF+ IQ+   +RSIS HPSGD +L G
Sbjct: 192 VTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVG 251

Query: 256 TDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGISA 315
           T H    LYD+NTFQCF+S N P+  +  AI  + Y+ + +MYVT SKDG ++LWDG+S 
Sbjct: 252 TQHPTLRLYDINTFQCFVSCN-PQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSN 311

Query: 316 KCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGA---THMQ 375
           +CI +   AH  AE  SA F+K+ +Y+LS GKDS  KLW++ TGR + +Y GA       
Sbjct: 312 RCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQV 371

Query: 376 LRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFIS 434
            R QAVFN TE+++L  DE +  +  WD+ TAER       H    R + HSPT   F++
Sbjct: 372 HRTQAVFNHTEDYILLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMT 424

[Close]
BLAST of MELO3C002045 vs. ExPASy Swiss-Prot
Match: Q5BJQ6 (Cleavage stimulation factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Cstf1 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-78
Identity = 167/430 (38.84%), Postives = 242/430 (56.28%), Query Frame = 0 

Query: 16  RQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSP 75
           +Q+  LI++ L        A+   +  + P +V  P ++L+ L+  G+  E D+T     
Sbjct: 12  QQLYKLIISQLLYDGYISIANGLIN-EIKPQSVCAPSEQLLHLIKLGM--ENDDT----- 71

Query: 76  ASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCAR 135
            +  Y  G S     G       + I+     D +  S    ++ET +++ HK   R A 
Sbjct: 72  -AVQYAIGRSDTVAPG-------TGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVAT 131

Query: 136 FSADGRFVATGSADMSIKLFEVAK--------IKQMMLPDAKDG-PVRPVIRTFYDHIQP 195
           +S DG+ +ATGSAD SIK+ +  +        I+ MM   A+      PVIRT YDH+  
Sbjct: 132 YSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDE 191

Query: 196 INDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDHLLAG 255
           +  L FHP   +L SG++D+T+K FD+SK +AK+AF+ IQ+   +RSIS HPSGD +L G
Sbjct: 192 VTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVG 251

Query: 256 TDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGISA 315
           T H    LYD+NTFQCF+S N P+  +  AI  + Y+ + +MYVT SKDG ++LWDG+S 
Sbjct: 252 TQHPTLRLYDINTFQCFVSCN-PQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSN 311

Query: 316 KCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGA---THMQ 375
           +CI +   AH  AE  SA F+K+ +Y+LS GKDS  KLW++ TGR + +Y GA       
Sbjct: 312 RCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQV 371

Query: 376 LRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFIS 434
            R QAVFN TE+++L  DE +  +  WD+ TAER       H    R + HSPT   F++
Sbjct: 372 HRTQAVFNHTEDYILLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMT 424

[Close]
BLAST of MELO3C002045 vs. ExPASy Swiss-Prot
Match: Q5R8K2 (Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.9e-78
Identity = 167/430 (38.84%), Postives = 242/430 (56.28%), Query Frame = 0 

Query: 16  RQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSP 75
           +Q+  LI++ L        A+   +  + P +V  P ++L+ L+  G+  E D+T     
Sbjct: 12  QQLYKLIISQLLYDGYISIANGLIN-EIKPQSVCAPSEQLLHLIKLGM--ENDDT----- 71

Query: 76  ASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCAR 135
            +  Y  G S     G       + I+     D +  S    ++ET +++ HK   R A 
Sbjct: 72  -AVQYAIGRSDTVAPG-------TGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVAT 131

Query: 136 FSADGRFVATGSADMSIKLFEVAK--------IKQMMLPDAKDG-PVRPVIRTFYDHIQP 195
           +S DG+ +ATGSAD SIK+ +  +        I+ MM   A+      PVIRT YDH+  
Sbjct: 132 YSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDE 191

Query: 196 INDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDHLLAG 255
           +  L FHP   +L SG++D+T+K FD+SK +AK+AF+ IQ+   +RSIS HPSGD +L G
Sbjct: 192 VTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVG 251

Query: 256 TDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDGISA 315
           T H    LYD+NTFQCF+S N P+  +  AI  + Y+++ +MYVT SKDG ++LWDG+S 
Sbjct: 252 TQHPTLRLYDINTFQCFVSCN-PQDQHADAICSVNYNSSANMYVTGSKDGCIKLWDGVSN 311

Query: 316 KCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGA---THMQ 375
           +CI +   AH  AE  SA F+K+ +Y+LS GKDS  KLW++ TGR + +Y GA       
Sbjct: 312 RCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQV 371

Query: 376 LRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFIS 434
            R QAVFN TE++VL  DE +  +  WD+  AER       H    R + HSPT   F++
Sbjct: 372 HRTQAVFNHTEDYVLLPDERTISLCCWDSRIAERRNLLSLGHNNIVRCIVHSPTNPGFMT 424

[Close]
BLAST of MELO3C002045 vs. NCBI nr
Match: XP_008452744.1 (PREDICTED: cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo])

HSP 1 Score: 877.9 bits (2267), Expect = 3.7e-251
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE
Sbjct: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL
Sbjct: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT
Sbjct: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA
Sbjct: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKETL
Sbjct: 421 FISCGTDKSIRFWKETL 437

[Close]
BLAST of MELO3C002045 vs. NCBI nr
Match: TYJ98952.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 871.3 bits (2250), Expect = 3.5e-249
Identity = 437/443 (98.65%), Postives = 437/443 (98.65%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQ------AASAAASATMTPLNVDIPPKK 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQ      AASAAASATMTPLNVDIPPKK
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQASFSLRAASAAASATMTPLNVDIPPKK 60

Query: 61  LMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSK 120
           LMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSK
Sbjct: 61  LMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSK 120

Query: 121 NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR 180
           NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR
Sbjct: 121 NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR 180

Query: 181 PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI 240
           PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI
Sbjct: 181 PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI 240

Query: 241 SLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK 300
           SLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK
Sbjct: 241 SLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK 300

Query: 301 DGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK 360
           DGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK
Sbjct: 301 DGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK 360

Query: 361 QYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEH 420
           QYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEH
Sbjct: 361 QYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEH 420

Query: 421 SPTESAFISCGTDKSIRFWKETL 438
           SPTESAFISCGTDKSIRFWKETL
Sbjct: 421 SPTESAFISCGTDKSIRFWKETL 443

[Close]
BLAST of MELO3C002045 vs. NCBI nr
Match: XP_011650275.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucumis sativus] >KGN64071.1 hypothetical protein Csa_013657 [Cucumis sativus])

HSP 1 Score: 859.4 bits (2219), Expect = 1.4e-245
Identity = 426/437 (97.48%), Postives = 433/437 (99.08%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDG+LYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVD+PPKKLMELVA
Sbjct: 1   MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEKDETLRGSPASALYEFGSS+PTTFGSAQPSR SAI+FSTTQDTK SSKNFPKHE
Sbjct: 61  KGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           D+LLAGTDHQI HLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL
Sbjct: 241 DYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDGI AKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT
Sbjct: 301 WDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           H+QLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA
Sbjct: 361 HIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKE+L
Sbjct: 421 FISCGTDKSIRFWKESL 437

[Close]
BLAST of MELO3C002045 vs. NCBI nr
Match: XP_022923614.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucurbita moschata])

HSP 1 Score: 839.0 bits (2166), Expect = 1.9e-239
Identity = 412/437 (94.28%), Postives = 427/437 (97.71%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASA+ TPLNVD+PP KLMELVA
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASASRTPLNVDVPPNKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEK+E LRGSPASALYEFGSSVP+TFGS QPSRASAI+FST QDTK SSKNFPKHE
Sbjct: 61  KGLAVEKEEMLRGSPASALYEFGSSVPSTFGSTQPSRASAIDFSTVQDTKGSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPD+KDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDSKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVL+SGAKD TIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLISGAKDQTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           D+LLAGTDH IAHLYDVNTFQCFLSANVPEIGN+GAINQ+RYSATGSMYVTASKDGAVRL
Sbjct: 241 DYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNSGAINQVRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDG+SAKC+RSIVSAHGTAEATSAKFTKDERYVLSCGKDS+VKLWDVGTG+LVKQYVGAT
Sbjct: 301 WDGVSAKCLRSIVSAHGTAEATSAKFTKDERYVLSCGKDSTVKLWDVGTGKLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           HMQLRCQAVFND EEFVLSIDEPSNEIVIWDALTAERVARWPSNH+G PRWLEHSPTESA
Sbjct: 361 HMQLRCQAVFNDNEEFVLSIDEPSNEIVIWDALTAERVARWPSNHIGPPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKETL
Sbjct: 421 FISCGTDKSIRFWKETL 437

[Close]
BLAST of MELO3C002045 vs. NCBI nr
Match: XP_023001188.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucurbita maxima])

HSP 1 Score: 837.4 bits (2162), Expect = 5.6e-239
Identity = 411/437 (94.05%), Postives = 426/437 (97.48%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASA+ TPLNVD+PP KLMELVA
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASASRTPLNVDVPPNKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEK+E LRGSPASALYEFGSSVP+TFGS QPSRASAI+FST QDTK SSKNFPKHE
Sbjct: 61  KGLAVEKEEMLRGSPASALYEFGSSVPSTFGSTQPSRASAIDFSTVQDTKGSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPD+KDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDSKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVL+SGAKD TIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLISGAKDQTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           D+LLAGTDH IAHLYDVNTFQCFLSANVPEIGN+GAINQ+RYSATGSMYVTASKDGAVRL
Sbjct: 241 DYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNSGAINQVRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDG+SAKC+RSIVSAHGTAEATSAKFTKDERYVLSCGKDS+VKLWDVGTG+LVKQYVGAT
Sbjct: 301 WDGVSAKCLRSIVSAHGTAEATSAKFTKDERYVLSCGKDSTVKLWDVGTGKLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           HMQLRCQA FND EEFVLSIDEPSNEIVIWDALTAERVARWPSNH+G PRWLEHSPTESA
Sbjct: 361 HMQLRCQAAFNDNEEFVLSIDEPSNEIVIWDALTAERVARWPSNHIGPPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKETL
Sbjct: 421 FISCGTDKSIRFWKETL 437

[Close]
BLAST of MELO3C002045 vs. ExPASy TrEMBL
Match: A0A1S3BUL1 (Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103493651 PE=4 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 1.8e-251
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE
Sbjct: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL
Sbjct: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT
Sbjct: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA
Sbjct: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKETL
Sbjct: 421 FISCGTDKSIRFWKETL 437

[Close]
BLAST of MELO3C002045 vs. ExPASy TrEMBL
Match: A0A5D3BGR2 (Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001530 PE=4 SV=1)

HSP 1 Score: 871.3 bits (2250), Expect = 1.7e-249
Identity = 437/443 (98.65%), Postives = 437/443 (98.65%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQ------AASAAASATMTPLNVDIPPKK 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQ      AASAAASATMTPLNVDIPPKK
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQASFSLRAASAAASATMTPLNVDIPPKK 60

Query: 61  LMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSK 120
           LMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSK
Sbjct: 61  LMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSK 120

Query: 121 NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR 180
           NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR
Sbjct: 121 NFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVR 180

Query: 181 PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI 240
           PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI
Sbjct: 181 PVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSI 240

Query: 241 SLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK 300
           SLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK
Sbjct: 241 SLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASK 300

Query: 301 DGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK 360
           DGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK
Sbjct: 301 DGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVK 360

Query: 361 QYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEH 420
           QYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEH
Sbjct: 361 QYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEH 420

Query: 421 SPTESAFISCGTDKSIRFWKETL 438
           SPTESAFISCGTDKSIRFWKETL
Sbjct: 421 SPTESAFISCGTDKSIRFWKETL 443

[Close]
BLAST of MELO3C002045 vs. ExPASy TrEMBL
Match: A0A0A0LVN0 (Cleavage stimulation factor 50 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_1G039850 PE=4 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 6.6e-246
Identity = 426/437 (97.48%), Postives = 433/437 (99.08%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDG+LYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVD+PPKKLMELVA
Sbjct: 1   MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEKDETLRGSPASALYEFGSS+PTTFGSAQPSR SAI+FSTTQDTK SSKNFPKHE
Sbjct: 61  KGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           D+LLAGTDHQI HLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL
Sbjct: 241 DYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDGI AKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT
Sbjct: 301 WDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           H+QLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA
Sbjct: 361 HIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKE+L
Sbjct: 421 FISCGTDKSIRFWKESL 437

[Close]
BLAST of MELO3C002045 vs. ExPASy TrEMBL
Match: A0A6J1E6X2 (Cleavage stimulation factor 50 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC111431271 PE=4 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 9.3e-240
Identity = 412/437 (94.28%), Postives = 427/437 (97.71%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASA+ TPLNVD+PP KLMELVA
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASASRTPLNVDVPPNKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEK+E LRGSPASALYEFGSSVP+TFGS QPSRASAI+FST QDTK SSKNFPKHE
Sbjct: 61  KGLAVEKEEMLRGSPASALYEFGSSVPSTFGSTQPSRASAIDFSTVQDTKGSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPD+KDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDSKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVL+SGAKD TIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLISGAKDQTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           D+LLAGTDH IAHLYDVNTFQCFLSANVPEIGN+GAINQ+RYSATGSMYVTASKDGAVRL
Sbjct: 241 DYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNSGAINQVRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDG+SAKC+RSIVSAHGTAEATSAKFTKDERYVLSCGKDS+VKLWDVGTG+LVKQYVGAT
Sbjct: 301 WDGVSAKCLRSIVSAHGTAEATSAKFTKDERYVLSCGKDSTVKLWDVGTGKLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           HMQLRCQAVFND EEFVLSIDEPSNEIVIWDALTAERVARWPSNH+G PRWLEHSPTESA
Sbjct: 361 HMQLRCQAVFNDNEEFVLSIDEPSNEIVIWDALTAERVARWPSNHIGPPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKETL
Sbjct: 421 FISCGTDKSIRFWKETL 437

[Close]
BLAST of MELO3C002045 vs. ExPASy TrEMBL
Match: A0A6J1KPS8 (Cleavage stimulation factor 50 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111495397 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 2.7e-239
Identity = 411/437 (94.05%), Postives = 426/437 (97.48%), Query Frame = 0 

Query: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVA 60
           MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASA+ TPLNVD+PP KLMELVA
Sbjct: 1   MEGSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASASRTPLNVDVPPNKLMELVA 60

Query: 61  KGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHE 120
           KGLAVEK+E LRGSPASALYEFGSSVP+TFGS QPSRASAI+FST QDTK SSKNFPKHE
Sbjct: 61  KGLAVEKEEMLRGSPASALYEFGSSVPSTFGSTQPSRASAIDFSTVQDTKGSSKNFPKHE 120

Query: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180
           TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPD+KDGPVRPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDSKDGPVRPVIRTF 180

Query: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240
           YDHIQPINDLDFHPQNTVL+SGAKD TIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLISGAKDQTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 241 DHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRL 300
           D+LLAGTDH IAHLYDVNTFQCFLSANVPEIGN+GAINQ+RYSATGSMYVTASKDGAVRL
Sbjct: 241 DYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNSGAINQVRYSATGSMYVTASKDGAVRL 300

Query: 301 WDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGAT 360
           WDG+SAKC+RSIVSAHGTAEATSAKFTKDERYVLSCGKDS+VKLWDVGTG+LVKQYVGAT
Sbjct: 301 WDGVSAKCLRSIVSAHGTAEATSAKFTKDERYVLSCGKDSTVKLWDVGTGKLVKQYVGAT 360

Query: 361 HMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESA 420
           HMQLRCQA FND EEFVLSIDEPSNEIVIWDALTAERVARWPSNH+G PRWLEHSPTESA
Sbjct: 361 HMQLRCQAAFNDNEEFVLSIDEPSNEIVIWDALTAERVARWPSNHIGPPRWLEHSPTESA 420

Query: 421 FISCGTDKSIRFWKETL 438
           FISCGTDKSIRFWKETL
Sbjct: 421 FISCGTDKSIRFWKETL 437

[Close]
BLAST of MELO3C002045 vs. TAIR 10
Match: AT5G60940.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 602.8 bits (1553), Expect = 2.2e-172
Identity = 287/435 (65.98%), Postives = 359/435 (82.53%), Query Frame = 0 

Query: 3   GSFEQTLQDGKLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDIPPKKLMELVAKG 62
           G  EQ LQDG ++RQ+N+LIVAHLR HNL+Q ASA ASATMTPLN+++PP +L+ELVAKG
Sbjct: 5   GDLEQALQDGNIFRQLNALIVAHLRHHNLSQVASAVASATMTPLNIEVPPNRLLELVAKG 64

Query: 63  LAVEKDETLRGSPASALYEFGSSVPTTFGSAQPSRASAINFSTTQDTKVSSKNFPKHETR 122
           LA E + TLRG  +S L      +P+++GS    R ++I+FS     K SSK  PKHE++
Sbjct: 65  LAAENNGTLRGVSSSVL------LPSSYGSITTPRTASIDFSVNH-AKGSSKTIPKHESK 124

Query: 123 HLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYD 182
            LSEHK+V RCARFS DG F ATG AD SIKLFEV K+KQM+  D +    RP+IRTFYD
Sbjct: 125 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQ---ARPLIRTFYD 184

Query: 183 HIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDH 242
           H +PINDLDFHP++T+L+S AKD+ IKFFDFSK TAK+AF+V QDTHNVRSIS HPSG+ 
Sbjct: 185 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 244

Query: 243 LLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWD 302
           LLAGTDH I HLYDVNT+QCFL +N P+ G +GAINQ+RYS+TGS+Y+TASKDGA+RL+D
Sbjct: 245 LLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFD 304

Query: 303 GISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHM 362
           G+SAKC+RSI +AHG +E TSA FTKD+R+VLS GKDS+VKLW++G+GR+VK+Y+GA  +
Sbjct: 305 GVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRV 364

Query: 363 QLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFI 422
           +LR QA+FNDTEEFV+SIDE SNE+V WDA TA++VA+WPSNH GAPRW+EHSP ES F+
Sbjct: 365 KLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFV 424

Query: 423 SCGTDKSIRFWKETL 438
           +CG D+SIRFWKE++
Sbjct: 425 TCGIDRSIRFWKESV 429

[Close]
BLAST of MELO3C002045 vs. TAIR 10
Match: AT5G60940.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 497.7 bits (1280), Expect = 9.8e-141
Identity = 229/334 (68.56%), Postives = 284/334 (85.03%), Query Frame = 0 

Query: 104 STTQDTKVSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQM 163
           ++    K SSK  PKHE++ LSEHK+V RCARFS DG F ATG AD SIKLFEV K+KQM
Sbjct: 7   TSVNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 66

Query: 164 MLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFR 223
           +  D +    RP+IRTFYDH +PINDLDFHP++T+L+S AKD+ IKFFDFSK TAK+AF+
Sbjct: 67  ISGDTQ---ARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFK 126

Query: 224 VIQDTHNVRSISLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYS 283
           V QDTHNVRSIS HPSG+ LLAGTDH I HLYDVNT+QCFL +N P+ G +GAINQ+RYS
Sbjct: 127 VFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYS 186

Query: 284 ATGSMYVTASKDGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVK 343
           +TGS+Y+TASKDGA+RL+DG+SAKC+RSI +AHG +E TSA FTKD+R+VLS GKDS+VK
Sbjct: 187 STGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVK 246

Query: 344 LWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPS 403
           LW++G+GR+VK+Y+GA  ++LR QA+FNDTEEFV+SIDE SNE+V WDA TA++VA+WPS
Sbjct: 247 LWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPS 306

Query: 404 NHVGAPRWLEHSPTESAFISCGTDKSIRFWKETL 438
           NH GAPRW+EHSP ES F++CG D+SIRFWKE++
Sbjct: 307 NHNGAPRWIEHSPVESVFVTCGIDRSIRFWKESV 337

[Close]
BLAST of MELO3C002045 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 9.4e-27
Identity = 69/319 (21.63%), Postives = 154/319 (48.28%), Query Frame = 0 

Query: 117 PKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPV 176
           P   ++ L+ H       +FS+DGR +A+ SAD +I+ + +  I         + P+   
Sbjct: 13  PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTI---------NDPIAEP 72

Query: 177 IRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISL 236
           ++ F  H   I+D+ F      +VS + D T+K +D    T      +I  T+    ++ 
Sbjct: 73  VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVE--TGSLIKTLIGHTNYAFCVNF 132

Query: 237 HPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDG 296
           +P  + +++G+  +   ++DV T +C     +P   ++  +  + ++  GS+ V++S DG
Sbjct: 133 NPQSNMIVSGSFDETVRIWDVTTGKCL--KVLP--AHSDPVTAVDFNRDGSLIVSSSYDG 192

Query: 297 AVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQY 356
             R+WD  +  C+++++        +  +F+ + +++L    D++++LW++ + + +K Y
Sbjct: 193 LCRIWDSGTGHCVKTLIDDE-NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY 252

Query: 357 VGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSP 416
            G  + Q    + F+ T    +      N + +W+ L ++++ +    H      +   P
Sbjct: 253 TGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE-LNSKKLLQKLEGHTETVMNVACHP 312

Query: 417 TESAFISCGTDKSIRFWKE 436
           TE+   S   DK++R W +
Sbjct: 313 TENLIASGSLDKTVRIWTQ 314

[Close]
BLAST of MELO3C002045 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-23
Identity = 75/322 (23.29%), Postives = 145/322 (45.03%), Query Frame = 0 

Query: 117 PKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPV 176
           P    + L  H     C +FS DG  +A+ S D ++ L+                    +
Sbjct: 32  PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS--------------L 91

Query: 177 IRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDF-SKLTAKKAFRVIQDTHNVRSIS 236
           I  +  H   I+DL +   +    S + D T++ +D  S     K  R    T+ V  ++
Sbjct: 92  IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR--GHTNFVFCVN 151

Query: 237 LHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKD 296
            +P  + +++G+  +   +++V T +C          ++  I+ + ++  GS+ V+AS D
Sbjct: 152 FNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK----AHSMPISSVHFNRDGSLIVSASHD 211

Query: 297 GAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQ 356
           G+ ++WD     C+++++     A  + AKF+ + +++L    DS++KL +  TG+ +K 
Sbjct: 212 GSCKIWDAKEGTCLKTLIDDKSPA-VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKV 271

Query: 357 YVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHS 416
           Y G T+      + F+ T    +      N + +WD L A  + +    H  A   +   
Sbjct: 272 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD-LQARNILQRLEGHTDAVISVSCH 331

Query: 417 PTESAFISCGT--DKSIRFWKE 436
           P ++   S G   DK+IR WK+
Sbjct: 332 PVQNEISSSGNHLDKTIRIWKQ 331

[Close]
BLAST of MELO3C002045 vs. TAIR 10
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 80.9 bits (198), Expect = 2.8e-15
Identity = 62/238 (26.05%), Postives = 117/238 (49.16%), Query Frame = 0 

Query: 128 KNVARCARFSADGRFVATGSADMSIKLFEV--AKIKQMMLPDAKDGPVRPVIRTFYDHIQ 187
           K+ A CARFS DG+F+A+ S D  I++++    K+K+ +   A +        +F  H  
Sbjct: 213 KSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADE--------SFMMHDD 272

Query: 188 PINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHN--VRSISLHPSGDHL 247
           P+  +DF   + +L SG++D  IK +        + F    D H+  V S+S    G  L
Sbjct: 273 PVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRF----DAHSQGVTSLSFSRDGSQL 332

Query: 248 LAGTDHQIAHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVRLWDG 307
           L+ +  Q A ++ + + +          G+   +N   +++ GS  +TAS D  V++WD 
Sbjct: 333 LSTSFDQTARIHGLKSGKLLKEFR----GHTSYVNHAIFTSDGSRIITASSDCTVKVWDS 392

Query: 308 ISAKCIRSI---VSAHGTAEATSA--KFTKDERYVLSCGKDSSVKLWDVGTGRLVKQY 357
            +  C+++        GT  + ++   F K+  +++ C K SS+ +  +  G++VK +
Sbjct: 393 KTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTL-QGQVVKSF 433

The following BLAST results are available for this feature:
BLAST of MELO3C002045 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L4J23.0e-17165.98Cleavage stimulation factor subunit 50 OS=Arabidopsis thaliana OX=3702 GN=CSTF50... [more]
Q050484.7e-7939.07Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1[more]
Q99LC21.0e-7838.84Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=... [more]
Q5BJQ61.0e-7838.84Cleavage stimulation factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Cstf1 PE=... [more]
Q5R8K23.9e-7838.84Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1[more]
BLAST of MELO3C002045 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452744.13.7e-251100.00PREDICTED: cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo][more]
TYJ98952.13.5e-24998.65cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo var. makuwa][more]
XP_011650275.11.4e-24597.48cleavage stimulation factor subunit 50 isoform X1 [Cucumis sativus] >KGN64071.1 ... [more]
XP_022923614.11.9e-23994.28cleavage stimulation factor subunit 50 isoform X1 [Cucurbita moschata][more]
XP_023001188.15.6e-23994.05cleavage stimulation factor subunit 50 isoform X1 [Cucurbita maxima][more]
BLAST of MELO3C002045 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BUL11.8e-251100.00Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC1034936... [more]
A0A5D3BGR21.7e-24998.65Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo var. makuwa OX=119469... [more]
A0A0A0LVN06.6e-24697.48Cleavage stimulation factor 50 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_1G0... [more]
A0A6J1E6X29.3e-24094.28Cleavage stimulation factor 50 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1KPS82.7e-23994.05Cleavage stimulation factor 50 kDa subunit OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
BLAST of MELO3C002045 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G60940.12.2e-17265.98Transducin/WD40 repeat-like superfamily protein [more]
AT5G60940.29.8e-14168.56Transducin/WD40 repeat-like superfamily protein [more]
AT3G49660.19.4e-2721.63Transducin/WD40 repeat-like superfamily protein [more]
AT4G02730.12.2e-2323.29Transducin/WD40 repeat-like superfamily protein [more]
AT1G73720.12.8e-1526.05transducin family protein / WD-40 repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 199..213
score: 31.54
coord: 333..347
score: 34.9
coord: 289..303
score: 35.71
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 117..156
e-value: 3.9E-5
score: 33.1
coord: 305..346
e-value: 9.0E-5
score: 31.9
coord: 259..302
e-value: 0.0017
score: 27.6
coord: 218..256
e-value: 2.1
score: 15.0
coord: 173..212
e-value: 4.7E-7
score: 39.4
coord: 394..434
e-value: 0.49
score: 19.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 121..155
e-value: 5.3E-5
score: 23.9
coord: 272..302
e-value: 0.059
score: 14.3
coord: 307..346
e-value: 5.2E-4
score: 20.8
coord: 177..212
e-value: 8.5E-6
score: 26.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 124..165
score: 10.107432
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 180..221
score: 10.942887
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 270..311
score: 12.446706
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 322..355
score: 10.942887
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 103..436
e-value: 4.7E-59
score: 201.7
IPR044633Cleavage stimulation factor subunit 1-likePANTHERPTHR44133CLEAVAGE STIMULATION FACTOR SUBUNIT 1coord: 2..436
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 333..347
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 180..214
score: 9.045603
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 270..302
score: 10.126507
NoneNo IPR availableCDDcd00200WD40coord: 120..434
e-value: 1.07351E-49
score: 168.667
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 116..434

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002045.1MELO3C002045.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031124 mRNA 3'-end processing
cellular_component GO:0005848 mRNA cleavage stimulating factor complex
molecular_function GO:0005515 protein binding