MELO3C002035 (gene) Melon (DHL92) v4

Overview
NameMELO3C002035
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionmitochondrial import receptor subunit TOM5 homolog
Locationchr12: 25340383 .. 25342740 (+)
RNA-Seq ExpressionMELO3C002035
SyntenyMELO3C002035
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCAAACCAAACCCCCAGAACCTAAAACCCTAACGCTCGCAATACGCCTTCGCTCTCTGTACTCCGCGCGAAAATGGCCGACGATTCCAGCTCGGTGAAGAAGGTGAAGAATCTTCTCTTTTCCGGTACGGCGAATTCCGTCGAGACTGTGAAATCCTTTTTCAATTCTCAGGTTTATGACGAAGAAAAGTGGGCCTTGAACATGGTACGCTTCCGATCCCATAAATTTCATTCCAATATCTATGTCTTTTTTCATAACCTGGATTTTTCGATCTCCCAAAATCTGCTAAATGGGATTTCGAGGATTGGGCAACATCGGTTTTGTCTTTTATATTGCATTATTAAGGCCTTGCAATATGTTTGGTAGCTGAGAAAGTTTGAGAAATCGTGTGAATTTTTATTTTTTTTTCATTTACCGCAAAAAGTGTCGATCTTTTAATGGAAATGCGCAATTTATAGTCTGACACTTGTGGATTTAAGTCATACTCGAAGCTGTCATTGTTTTGAAATTAAAGATATTTCAGGAGGAAATGTAAGTTCCTCGTAAACAGTTCTTGCTAGAAAACATTTGATTATATTGAATTCAAGAACTTGTGGATGGGCTATTTGTGAAGTTGTATGTGTAGTTAGCAGTCTCCTCACTTTATATCAATTTGTTACGTTTCCTTCCGGTTCGGTACCTTGCTTTTTGTTGTCTCAGACTGTGATCGTTATTTATTTTTTATTTTTTTTCTCACTTTTGAAATTGCGTATTAGAGTAAAAAGGAAGAAAAATTGTAATTTTTGGTTTTGGGTAATTACAAACAAGCAGTAAGTTTGTCTCTGTTTAGCACTTCTATCGGGTTGTTGGAACTGGGAAGATTAAGGGGAGAATTGGATGTAATGATTTGGGTTGGTTCTCTATATTTTTCCATCTCATTTAAATCTATGTTTCAACTCAAGCCAAGGCTCTTTAGCATGTCTTGCGTGATGATTAAAAGAATGAAACTAATTTGCTCAAGTCTGAAAAAATGTAAAACTTCCCTTCTGCACGGAATGTCAATACTTGAGTTGTTGTGACAAAAGATTTAATTACATCGAAGATAATTTTTTTAGAATAAGTCGATCCTGATTATAGTCGTGATGGTAAGGATGACATTTTATAACTTTTACTTATGTATGTTGCAACACTTGATGGATCATACAATATGAGGATTTGTTTCTTATTAAATTTGAAGCTTGCATCTATTACCACCTCGATGCCTATGCATGGCTTCTTCAAGAGGAAGTCTGGGACTTCCTTTAGCTTTTTAAAATATTGATTCAATTATAATAATTTGCAGCAAATTACATTGATTTGTTCTGTTTTTCTGAGTATTTGGTTAGAGTTGCAAATGCATAACTATCTCCTCACATGCCTGTGTCATATGCGTCATTTATTCCTATTGAATCTGAAACATAAAACTGAACACGATATGCAGTTTTCCATTTAAGAAAAAAAACGAGTAAGCATCATTGCTGTCTCTGCAAGTAAATTTGAACTTCGAAGGCAGGCAGCATAAGAAGTACTATTCTCAAGGACATCCAGAGTAAGTGAGATCGGCAGATGCCCACGTGCATGAAAAGAATGATTAGGCTTTGGCATTAAGAAGAGGGATGAATGCCATCCAATTAGGTTTTAGTTGTAATAGAGCTACCTTACTTCCTTAATTCATTATTTGGAACTTGGGCAAATATTGTTAGATTTTGTAAGGTCGTGCTTATGTGAATTCTGTTTGCCATAAACACTCCTAAAGAAAAGTATATTTCTTTGTTTTTTTTCTATAAATGAAATATCAGGCTCCTAAACACAACATTTCCTTGGTATCATGGTATGGCTGTATTTTATAAATAGAACTGAATTTCAACTCTCTTCGTTGTTGCAGAAATTGCTTCGTGCCGCTGGGATGTTTGCAGGATCCATTCTTCTCATGCGGAATTACGGAGATCTGATGACAATATGAGAGTTTGCGAGAGGGCAGCAATTCTTAGCGCATTACGTTTCTCTACTTCTTAGTTTGTTACAGCTTTATTCAATTTCGAAATAGGAAGTTTCGATTTTTTGTCCTCTTGGTCAAACTGATGAGAATGTGTTCTCTTTTCCCTTTGTAGTAGACCAATCTTTTAAATGCACTCTTTTTCACCTAAAACAGACTACAAAATTAAAAAAAATGAAATCCAAAACACTTGATTAGACCTTGAAAGTACCTTTCCTTCCTCAAAGAAAGCAATTCTTTGGTTTCTCAGTTCAAGAATGTCCAGTGGAATTACTGCTAATTTTGATGCATTGCTTCTTCTTCTCAACCATATCGATAAATTAATATCTAACTTTCTCCCT

mRNA sequence

TCTTCAAACCAAACCCCCAGAACCTAAAACCCTAACGCTCGCAATACGCCTTCGCTCTCTGTACTCCGCGCGAAAATGGCCGACGATTCCAGCTCGGTGAAGAAGGTGAAGAATCTTCTCTTTTCCGGTACGGCGAATTCCGTCGAGACTGTGAAATCCTTTTTCAATTCTCAGGTTTATGACGAAGAAAAGTGGGCCTTGAACATGAAATTGCTTCGTGCCGCTGGGATGTTTGCAGGATCCATTCTTCTCATGCGGAATTACGGAGATCTGATGACAATATGAGAGTTTGCGAGAGGGCAGCAATTCTTAGCGCATTACGTTTCTCTACTTCTTAGTTTGTTACAGCTTTATTCAATTTCGAAATAGGAAGTTTCGATTTTTTGTCCTCTTGGTCAAACTGATGAGAATGTGTTCTCTTTTCCCTTTGTAGTAGACCAATCTTTTAAATGCACTCTTTTTCACCTAAAACAGACTACAAAATTAAAAAAAATGAAATCCAAAACACTTGATTAGACCTTGAAAGTACCTTTCCTTCCTCAAAGAAAGCAATTCTTTGGTTTCTCAGTTCAAGAATGTCCAGTGGAATTACTGCTAATTTTGATGCATTGCTTCTTCTTCTCAACCATATCGATAAATTAATATCTAACTTTCTCCCT

Coding sequence (CDS)

ATGGCCGACGATTCCAGCTCGGTGAAGAAGGTGAAGAATCTTCTCTTTTCCGGTACGGCGAATTCCGTCGAGACTGTGAAATCCTTTTTCAATTCTCAGGTTTATGACGAAGAAAAGTGGGCCTTGAACATGAAATTGCTTCGTGCCGCTGGGATGTTTGCAGGATCCATTCTTCTCATGCGGAATTACGGAGATCTGATGACAATATGA

Protein sequence

MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI
Homology
[Close]
BLAST of MELO3C002035 vs. ExPASy Swiss-Prot
Match: Q9SD80 (Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana OX=3702 GN=TOM5 PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 6.6e-12
Identity = 30/48 (62.50%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 22 SVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI 70
          S+E +K+ ++S+V+DE+KWA+NMKLLRA GMFAG ++LMR+YGDLM +
Sbjct: 7  SIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54

[Close]
BLAST of MELO3C002035 vs. NCBI nr
Match: XP_004137442.1 (mitochondrial import receptor subunit TOM5 homolog [Cucumis sativus] >XP_008451171.1 PREDICTED: mitochondrial import receptor subunit TOM5 homolog [Cucumis melo] >TYJ98941.1 mitochondrial import receptor subunit TOM5-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 2.8e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLMTI
Sbjct: 61 RNYGDLMTI 69

[Close]
BLAST of MELO3C002035 vs. NCBI nr
Match: XP_038894051.1 (mitochondrial import receptor subunit TOM5 homolog [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 2.6e-26
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          MAD SSSV KVKN LFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MADASSSVNKVKNFLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLMTI
Sbjct: 61 RNYGDLMTI 69

[Close]
BLAST of MELO3C002035 vs. NCBI nr
Match: KAG6572899.1 (Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012088.1 Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.0 bits (310), Expect = 5.0e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          M D SSSVKKVKN +FSGTANSVETVKSFFNSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MGDASSSVKKVKNFIFSGTANSVETVKSFFNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLM I
Sbjct: 61 RNYGDLMAI 69

[Close]
BLAST of MELO3C002035 vs. NCBI nr
Match: XP_022924183.1 (mitochondrial import receptor subunit TOM5 homolog [Cucurbita moschata] >XP_023001126.1 mitochondrial import receptor subunit TOM5 homolog [Cucurbita maxima] >XP_023520288.1 mitochondrial import receptor subunit TOM5 homolog [Cucurbita pepo subsp. pepo] >KAG6584406.1 Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019992.1 Mitochondrial import receptor subunit TOM5-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.6 bits (309), Expect = 6.5e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          M D SSSVKKVKN LFSGTANSVETVKSF+NSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MVDASSSVKKVKNFLFSGTANSVETVKSFYNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLM I
Sbjct: 61 RNYGDLMAI 69

[Close]
BLAST of MELO3C002035 vs. NCBI nr
Match: XP_022137624.1 (mitochondrial import receptor subunit TOM5 homolog [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          MAD SSS+KKVKN + SGT+NSVETV+SF NSQ++DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MADASSSMKKVKNFICSGTSNSVETVRSFLNSQIHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLM I
Sbjct: 61 RNYGDLMAI 69

[Close]
BLAST of MELO3C002035 vs. ExPASy TrEMBL
Match: A0A5D3BJP0 (Mitochondrial import receptor subunit TOM5-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001420 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLMTI
Sbjct: 61 RNYGDLMTI 69

[Close]
BLAST of MELO3C002035 vs. ExPASy TrEMBL
Match: A0A0A0LSV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039240 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLMTI
Sbjct: 61 RNYGDLMTI 69

[Close]
BLAST of MELO3C002035 vs. ExPASy TrEMBL
Match: A0A1S3BQV4 (mitochondrial import receptor subunit TOM5 homolog OS=Cucumis melo OX=3656 GN=LOC103492520 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLMTI
Sbjct: 61 RNYGDLMTI 69

[Close]
BLAST of MELO3C002035 vs. ExPASy TrEMBL
Match: A0A6J1KHR6 (mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495362 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          M D SSSVKKVKN LFSGTANSVETVKSF+NSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MVDASSSVKKVKNFLFSGTANSVETVKSFYNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLM I
Sbjct: 61 RNYGDLMAI 69

[Close]
BLAST of MELO3C002035 vs. ExPASy TrEMBL
Match: A0A6J1EBN7 (mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431705 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 1  MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60
          M D SSSVKKVKN LFSGTANSVETVKSF+NSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1  MVDASSSVKKVKNFLFSGTANSVETVKSFYNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 61 RNYGDLMTI 70
          RNYGDLM I
Sbjct: 61 RNYGDLMAI 69

[Close]
BLAST of MELO3C002035 vs. TAIR 10
Match: AT5G08040.1 (mitochondrial import receptor subunit TOM5 homolog )

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-13
Identity = 30/48 (62.50%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 22 SVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI 70
          S+E +K+ ++S+V+DE+KWA+NMKLLRA GMFAG ++LMR+YGDLM +
Sbjct: 7  SIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54

The following BLAST results are available for this feature:
BLAST of MELO3C002035 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SD806.6e-1262.50Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana OX=37... [more]
BLAST of MELO3C002035 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137442.12.8e-28100.00mitochondrial import receptor subunit TOM5 homolog [Cucumis sativus] >XP_0084511... [more]
XP_038894051.12.6e-2695.65mitochondrial import receptor subunit TOM5 homolog [Benincasa hispida][more]
KAG6572899.15.0e-2591.30Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argy... [more]
XP_022924183.16.5e-2591.30mitochondrial import receptor subunit TOM5 homolog [Cucurbita moschata] >XP_0230... [more]
XP_022137624.11.0e-2284.06mitochondrial import receptor subunit TOM5 homolog [Momordica charantia][more]
BLAST of MELO3C002035 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BJP01.4e-28100.00Mitochondrial import receptor subunit TOM5-like protein OS=Cucumis melo var. mak... [more]
A0A0A0LSV31.4e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039240 PE=4 SV=1[more]
A0A1S3BQV41.4e-28100.00mitochondrial import receptor subunit TOM5 homolog OS=Cucumis melo OX=3656 GN=LO... [more]
A0A6J1KHR63.1e-2591.30mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1EBN73.1e-2591.30mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita moschata OX=3662... [more]
BLAST of MELO3C002035 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08040.14.7e-1362.50mitochondrial import receptor subunit TOM5 homolog [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034553Mitochondrial import receptor subunit TOM5 homologue, viridiplantaePANTHERPTHR37251MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOGcoord: 19..69
NoneNo IPR availablePANTHERPTHR37251:SF1MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOGcoord: 19..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002035.1MELO3C002035.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005742 mitochondrial outer membrane translocase complex