MELO3C001986 (gene) Melon (DHL92) v4

Overview


Name	MELO3C001986
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Disulfide bond formation protein B 2, putative
Location	chr12: 25622317 .. 25624118 (+)
RNA-Seq Expression	MELO3C001986
Synteny	MELO3C001986

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATAAATGATTATAATTATATTCCCACTACCCCCCATTGACCTTATAAATGAGTGCACACCATGAGTTTGCCCTTCTCATATTTCTTCTGTCACCCTCCACTTTCTCACAGTGTCTTCCAACTTTTTCTCACCATATTGACTTTTAAAATATCATAAATTTTTTCCCCCTTTTTCTCCACTTCCCAAGTTTTCATCTTTCATTTTCCATAGAGAATCCTAAGCCTTTAATTAAAAGAACCACCCCTTGTCAAAACATTCAAAACATACAAACAAATTACCTCCATATAAAATGTTCTTGTTGCTATCACTTTCTTTTTGACTTGGGTGTGTAACAATCTTATAAATTGCCCTCTATCTAAACTACCCATCAAACACCTTTTTTTCTTCCTTCTCTCCATCAGCTCTGAGATTTCATATATAAATACCTCCATTGATTTTCTTTGCTTTGAAGCAGAGCAGCAGTTTCATCAATGGCAGCAGCCTCTCATTTCCTTCGTTTGCTTGTCATATTCTTGGGACTTTATAACCTTCTTTGTTCCAATGCTGTCCCAACTTCAAGTAAGTCCCTCAAATCAATATCTTCTCTCTTCTTTTTCCTTTTTCTTCTTGTAAAATGAACTAAACACCTCTGATCTGATTCTGTAGGAAGTGTCAGCCTCTTGCATGGATCTCTTCCATTTCTTCATGTTTCAAGCGACACCCACATGGTATGTTACATTACCCTTCAACCTCAATGTCATTATCCCTCCAAGTTTTTAGCTTTCGATCATAGAATCAGAGCAGTGATTATGTTTTGAAACTCTACTGTTCTTTCTTCTTCCGTTCCTAGTCTTTTAGAAATCAATAATCAAGTATGAACATAAATGATACAACATTAGAGAATTGACAAACAAATTTACGTAATTCTGTGTTAATTATGTCTATTGTCTAACGACATCACTAAGGATGTTAGAGATATAGACACCCACTAAATCCTATAGTCAAAATTGTAAATAGTGCAAATAACATACATTATACAACCTAGAGTTTTGCAAACCTAAGGTCTCTAAACCCTAACGTTGTTCTATATCTTAGTTGTTTGAAGTGCTAGATAAAATATTCAAGAACATTCCAACAACTAGAAATAACCACTCGGGTTTTAAAAATTTACTGTAATGTATCCGTTTATGTTACTGAGATTTAAACAGGGAAGGTTTTCTGTTTCATGCAGGTGACTAAAACAGAGGAAGAAGAGAGCCATGGAAGAATGGTTGTGGCACTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCATACACCAAGGCCACAATTTAGGGGCTGCGCTGATTGTTGATTAGATTTTACATTACATATTTTAGGGATTGGTTGGGCTTTATATTTTATATGATATTATTGGTTTGAATTATCTTTATATCCATCTATAATCATATTATATGTATTACATGGGAATATGAAAGCAGGGTTTGAGCTTCTTCATCACTCAATTAAGCTGTTGAAAAGCTGAGAAAAGAGATGGGTAGAAAAATTCATAAGATTAGGTCAAAAATGAGTACAAAAGATATGTGTACTTTTGCAAAACAAAGAGACCTTGTTTGGCTTCTTTGTTTAGTAATATATAACTTTCAGGGCTGAAATTAAAGCCTTTGAAACTGTTAGCATTTTACCAACGCAAGTATAGCTAAAATAGATTAAAGTATGAACTATCTATTGTTAGAAGTTCAAATCCCTACCCTTTCATACATTGAAATAAAAGAATCAAATAAAAGATGAATGGCCACTATCATAAATTTGGTGGG

mRNA sequence

CACATAAATGATTATAATTATATTCCCACTACCCCCCATTGACCTTATAAATGAGTGCACACCATGAGTTTGCCCTTCTCATATTTCTTCTGTCACCCTCCACTTTCTCACAGTGTCTTCCAACTTTTTCTCACCATATTGACTTTTAAAATATCATAAATTTTTTCCCCCTTTTTCTCCACTTCCCAAGTTTTCATCTTTCATTTTCCATAGAGAATCCTAAGCCTTTAATTAAAAGAACCACCCCTTGTCAAAACATTCAAAACATACAAACAAATTACCTCCATATAAAATGTTCTTGTTGCTATCACTTTCTTTTTGACTTGGGTGTGTAACAATCTTATAAATTGCCCTCTATCTAAACTACCCATCAAACACCTTTTTTTCTTCCTTCTCTCCATCAGCTCTGAGATTTCATATATAAATACCTCCATTGATTTTCTTTGCTTTGAAGCAGAGCAGCAGTTTCATCAATGGCAGCAGCCTCTCATTTCCTTCGTTTGCTTGTCATATTCTTGGGACTTTATAACCTTCTTTGTTCCAATGCTGTCCCAACTTCAAGAAGTGTCAGCCTCTTGCATGGATCTCTTCCATTTCTTCATGTTTCAAGCGACACCCACATGGTGACTAAAACAGAGGAAGAAGAGAGCCATGGAAGAATGGTTGTGGCACTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCATACACCAAGGCCACAATTTAGGGGCTGCGCTGATTGTTGATTAGATTTTACATTACATATTTTAGGGATTGGTTGGGCTTTATATTTTATATGATATTATTGGTTTGAATTATCTTTATATCCATCTATAATCATATTATATGTATTACATGGGAATATGAAAGCAGGGTTTGAGCTTCTTCATCACTCAATTAAGCTGTTGAAAAGCTGAGAAAAGAGATGGGTAGAAAAATTCATAAGATTAGGTCAAAAATGAGTACAAAAGATATGTGTACTTTTGCAAAACAAAGAGACCTTGTTTGGCTTCTTTGTTTAGTAATATATAACTTTCAGGGCTGAAATTAAAGCCTTTGAAACTGTTAGCATTTTACCAACGCAAGTATAGCTAAAATAGATTAAAGTATGAACTATCTATTGTTAGAAGTTCAAATCCCTACCCTTTCATACATTGAAATAAAAGAATCAAATAAAAGATGAATGGCCACTATCATAAATTTGGTGGG

Coding sequence (CDS)

ATGGCAGCAGCCTCTCATTTCCTTCGTTTGCTTGTCATATTCTTGGGACTTTATAACCTTCTTTGTTCCAATGCTGTCCCAACTTCAAGAAGTGTCAGCCTCTTGCATGGATCTCTTCCATTTCTTCATGTTTCAAGCGACACCCACATGGTGACTAAAACAGAGGAAGAAGAGAGCCATGGAAGAATGGTTGTGGCACTAAATGACTATCCAGGGTCAGGAGCCAACAATCGTCATACACCAAGGCCACAATTTAGGGGCTGCGCTGATTGTTGA

Protein sequence

MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESHGRMVVALNDYPGSGANNRHTPRPQFRGCADC

Homology

[Close]

BLAST of MELO3C001986 vs. NCBI nr
Match: XP_008442734.1 (PREDICTED: uncharacterized protein LOC103486492 [Cucumis melo] >TYJ98895.1 putative Disulfide bond formation protein B 2 [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 4.8e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. NCBI nr
Match: KAA0036087.1 (putative Disulfide bond formation protein B 2 [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVS+DTHMVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSTDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. NCBI nr
Match: XP_011649815.1 (uncharacterized protein LOC101218201 [Cucumis sativus] >KGN64005.1 hypothetical protein Csa_014107 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.2e-41
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPF HVSS+T MVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFPHVSSNTLMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. NCBI nr
Match: XP_038895124.1 (uncharacterized protein LOC120083435 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-36
Identity = 81/91 (89.01%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAA+HFLRLLVIFLGL +LLCSNAVPTSRSVSLL GS PFL VSS+THMVT TEEE S 
Sbjct: 1  MAAATHFLRLLVIFLGLCSLLCSNAVPTSRSVSLLRGSHPFLLVSSNTHMVTATEEEVSR 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. NCBI nr
Match: KAG6607449.1 (hypothetical protein SDJN03_00791, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037107.1 hypothetical protein SDJN02_00728 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 3.5e-34
Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 3  AASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESHGR 62
          A+++FL LLV+FLG+ NLLCSNAVPTSRSVSLLHGS  FLHVSSDTHMV+ T++EESHGR
Sbjct: 2  ASTNFLCLLVVFLGVSNLLCSNAVPTSRSVSLLHGSDQFLHVSSDTHMVSATKKEESHGR 61

Query: 63 MVVALNDYPGSGANNRHTPRPQFRGCADC 92
          M V LNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 62 MAVELNDYPGSGANNRHTPRPQFRGCADC 90

[Close]

BLAST of MELO3C001986 vs. ExPASy TrEMBL
Match: A0A5D3BKK4 (Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00920 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.3e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. ExPASy TrEMBL
Match: A0A1S3B758 (uncharacterized protein LOC103486492 OS=Cucumis melo OX=3656 GN=LOC103486492 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.3e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. ExPASy TrEMBL
Match: A0A5A7T3C3 (Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00820 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.2e-44
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVS+DTHMVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSTDTHMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. ExPASy TrEMBL
Match: A0A0A0LQ59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033240 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESH 60
          MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPF HVSS+T MVTKTEEEESH
Sbjct: 1  MAAASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFPHVSSNTLMVTKTEEEESH 60

Query: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 92
          GRMVVALNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 61 GRMVVALNDYPGSGANNRHTPRPQFRGCADC 91

[Close]

BLAST of MELO3C001986 vs. ExPASy TrEMBL
Match: A0A6J1GC04 (uncharacterized protein LOC111452592 OS=Cucurbita moschata OX=3662 GN=LOC111452592 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-34
Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 3  AASHFLRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESHGR 62
          A ++FL LLV+FLG+ NLLCSNAVPTSRSVSLLHGS  FLHVSSDTHMV+ T++EE+HGR
Sbjct: 2  ATTNFLCLLVVFLGVSNLLCSNAVPTSRSVSLLHGSDQFLHVSSDTHMVSATKKEENHGR 61

Query: 63 MVVALNDYPGSGANNRHTPRPQFRGCADC 92
          M V LNDYPGSGANNRHTPRPQFRGCADC
Sbjct: 62 MAVELNDYPGSGANNRHTPRPQFRGCADC 90

[Close]

BLAST of MELO3C001986 vs. TAIR 10
Match: AT3G47510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 8.6e-07
Identity = 39/85 (45.88%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 8  LRLLVIFLGLYNLLCSNAVPTSRSVSLLHGSLPFLHVSSDTHMVTKTEEEESHGRMVVAL 67
          + LLVIF    + +       SR  SL+      +    DT M  K E EE   RMV+ L
Sbjct: 7  IHLLVIFFLALSHIFFFPSHASRLGSLME-KPKIVRPQQDTLMDVKKEVEE---RMVMEL 66

Query: 68 NDYPGSGANNRHTPRPQFRGC-ADC 92
          NDYPGSGANNRH PR   RGC  DC
Sbjct: 67 NDYPGSGANNRHLPRQ--RGCVVDC 85

[Close]

BLAST of MELO3C001986 vs. TAIR 10
Match: AT1G74458.1 (unknown protein; LOCATED IN: endomembrane system; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 6.8e-04
Identity = 17/25 (68.00%), Postives = 19/25 (76.00%), Query Frame = 0


Query: 67 LNDYPGSGANNRHTPRPQFRGCADC 92
          +NDYPGSGANNRHTP      C+DC
Sbjct: 75 INDYPGSGANNRHTPH-----CSDC 94

The following BLAST results are available for this feature:

BLAST of MELO3C001986 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C001986 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442734.1	4.8e-44	100.00	PREDICTED: uncharacterized protein LOC103486492 [Cucumis melo] >TYJ98895.1 putat...	[more]
KAA0036087.1	1.1e-43	98.90	putative Disulfide bond formation protein B 2 [Cucumis melo var. makuwa]	[more]
XP_011649815.1	2.2e-41	96.70	uncharacterized protein LOC101218201 [Cucumis sativus] >KGN64005.1 hypothetical ...	[more]
XP_038895124.1	4.8e-36	89.01	uncharacterized protein LOC120083435 [Benincasa hispida]	[more]
KAG6607449.1	3.5e-34	83.15	hypothetical protein SDJN03_00791, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C001986 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKK4	2.3e-44	100.00	Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B758	2.3e-44	100.00	uncharacterized protein LOC103486492 OS=Cucumis melo OX=3656 GN=LOC103486492 PE=...	[more]
A0A5A7T3C3	5.2e-44	98.90	Putative Disulfide bond formation protein B 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0LQ59	1.1e-41	96.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033240 PE=4 SV=1	[more]
A0A6J1GC04	4.9e-34	82.02	uncharacterized protein LOC111452592 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]

BLAST of MELO3C001986 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47510.1	8.6e-07	45.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G74458.1	6.8e-04	68.00	unknown protein; LOCATED IN: endomembrane system; Has 9 Blast hits to 9 proteins...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33474	TRANSMEMBRANE PROTEIN	coord: 2..86
None	No IPR available	PANTHER	PTHR33474:SF2	TRANSMEMBRANE PROTEIN	coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C001986.1	MELO3C001986.1	mRNA