MELO3C001971 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTCATTCTGTTTCTCTTCTTAACTATCCTATCTTTGTATAGATTAGACTTTGATTTTGTTAATTACACTTTTTGATTTCCCTTCCACCGACTCCAACTTTCGATGCTATCCCTTGGAATTGATTCCTCTGCTTTTTTTTATCTTTCTTACTTTCGATGACACTTGTTACTCTTTCCGTTTAACACGCACACAGCTGCACCGCTTTTGGAGCTTGACATCTAGAGGAAGGATAAGAAAAGATAAAGTGAATGATTTTGGAAGAACGATCTCTTTTTCTCTTCCTTCTTTCGTTTTGGGATTCTGGGTTTTGAAGATAATTGATAAATTGACCCAAATATGGGATCTGGGACTGGAAATTTCTTTAAAGTTGTTCTTAAAAACTTCGATGTTCTTGCTGGGTATCTCTCTGACTCTCTATATTCCTTTTTTTCGTTTGCTTTTTCAAAAGAAAAAAAATCCCATGATGGAGAATTAGTTTGTTAATGCTCCCATATATTGATACATTGCCATTATTTGATTTGCAGCCCTGTTGTCGGTCTTGTCTATCCTCTGTAAGTTTCTTTTTCACTCTAATCCTTCAAAATTTGTGTCAATTGGGCTGAATTCAATCGTTTTGAATATTGGGTTTTGGGTTTTTTTTTTCTTTTCTTTTTTTTCTTGGTAGATATGCCTCAATCAGAGCCATCGAGACCAAATCTCAAGTCGATGATCAGCAATGGCTTACTTATTGGGTTTTACACTCCATGATTACTCTCTTCGAGCTGACCTTTGCCAAGGTTCTTGAATGGTAGGCGCGTTAAAGGGGTTTCTTCTTTCCCAATTGCTTTGAATTTGATCTGTTAACAGAAACTTTTCCATGGCAGGATTCCAATATGGCCTTATGCGAAGCTGGTTGTGCTATGTTGGTTGTCAGGCTTTAGTGGAGCTTCGTATGTGTACGAGCATTACTTAAGACCTCTAATGGTGAACCAACAGAGAGTTAACGTTTGGTATGTTCCTAAAGGGAAGGATCCTTTGAACAAACGTGAGGACATTATTACTGCTGCAGAGAAGTACATTCAGGAACATGGAACTGGTGAACTTCAATACATGCTTGACAATGTGAGGATGAAATTTGTGTTACTTTGAACTTCTCCCTTGAATTCACAGAGCTTATTTCTTATGTTCTACCTCTACAGGCCGAAGTGCACAGGAGAAATAGTAGCAGTTATTATGGTTATGCAGATGACTATGGATATTGAAACTAATGCCACTCGAATTCAACTGGCTGCTTCAGATTAGAATAAGAGTGGGAACTCAAAACAAAGCTGAAAGTTCACTCCTTTTTTGTTTTTTTCTCTTTTGGGTCTGTGAAAAACTAGCCTCTGTTCATTGTTGTAGATGTTTTATCCAAACTTGTACTTCTTTTTTTTTTATCGTTTTTTTGTAATATCAAAGCAAATTC CCTTTCATTCTGTTTCTCTTCTTAACTATCCTATCTTTGTATAGATTAGACTTTGATTTTGTTAATTACACTTTTTGATTTCCCTTCCACCGACTCCAACTTTCGATGCTATCCCTTGGAATTGATTCCTCTGCTTTTTTTTATCTTTCTTACTTTCGATGACACTTGTTACTCTTTCCGTTTAACACGCACACAGCTGCACCGCTTTTGGAGCTTGACATCTAGAGGAAGGATAAGAAAAGATAAAGTGAATGATTTTGGAAGAACGATCTCTTTTTCTCTTCCTTCTTTCGTTTTGGGATTCTGGGTTTTGAAGATAATTGATAAATTGACCCAAATATGGGATCTGGGACTGGAAATTTCTTTAAAGTTGTTCTTAAAAACTTCGATGTTCTTGCTGGCCCTGTTGTCGGTCTTGTCTATCCTCTATATGCCTCAATCAGAGCCATCGAGACCAAATCTCAAGTCGATGATCAGCAATGGCTTACTTATTGGGTTTTACACTCCATGATTACTCTCTTCGAGCTGACCTTTGCCAAGGTTCTTGAATGGATTCCAATATGGCCTTATGCGAAGCTGGTTGTGCTATGTTGGTTGTCAGGCTTTAGTGGAGCTTCGTATGTGTACGAGCATTACTTAAGACCTCTAATGGTGAACCAACAGAGAGTTAACGTTTGGTATGTTCCTAAAGGGAAGGATCCTTTGAACAAACGTGAGGACATTATTACTGCTGCAGAGAAGTACATTCAGGAACATGGAACTGGTGAACTTCAATACATGCTTGACAATGCCGAAGTGCACAGGAGAAATAGTAGCAGTTATTATGGTTATGCAGATGACTATGGATATTGAAACTAATGCCACTCGAATTCAACTGGCTGCTTCAGATTAGAATAAGAGTGGGAACTCAAAACAAAGCTGAAAGTTCACTCCTTTTTTGTTTTTTTCTCTTTTGGGTCTGTGAAAAACTAGCCTCTGTTCATTGTTGTAGATGTTTTATCCAAACTTGTACTTCTTTTTTTTTTATCGTTTTTTTGTAATATCAAAGCAAATTC ATGGGATCTGGGACTGGAAATTTCTTTAAAGTTGTTCTTAAAAACTTCGATGTTCTTGCTGGCCCTGTTGTCGGTCTTGTCTATCCTCTATATGCCTCAATCAGAGCCATCGAGACCAAATCTCAAGTCGATGATCAGCAATGGCTTACTTATTGGGTTTTACACTCCATGATTACTCTCTTCGAGCTGACCTTTGCCAAGGTTCTTGAATGGATTCCAATATGGCCTTATGCGAAGCTGGTTGTGCTATGTTGGTTGTCAGGCTTTAGTGGAGCTTCGTATGTGTACGAGCATTACTTAAGACCTCTAATGGTGAACCAACAGAGAGTTAACGTTTGGTATGTTCCTAAAGGGAAGGATCCTTTGAACAAACGTGAGGACATTATTACTGCTGCAGAGAAGTACATTCAGGAACATGGAACTGGTGAACTTCAATACATGCTTGACAATGCCGAAGTGCACAGGAGAAATAGTAGCAGTTATTATGGTTATGCAGATGACTATGGATATTGA MGSGTGNFFKVVLKNFDVLAGPVVGLVYPLYASIRAIETKSQVDDQQWLTYWVLHSMITLFELTFAKVLEWIPIWPYAKLVVLCWLSGFSGASYVYEHYLRPLMVNQQRVNVWYVPKGKDPLNKREDIITAAEKYIQEHGTGELQYMLDNAEVHRRNSSSYYGYADDYGY Homology
BLAST of MELO3C001971 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.7e-56 Identity = 102/172 (59.30%), Postives = 131/172 (76.16%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 7.2e-44 Identity = 90/180 (50.00%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 169.9 bits (429), Expect = 2.6e-41 Identity = 80/147 (54.42%), Postives = 107/147 (72.79%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.0e-21 Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of MELO3C001971 vs. NCBI nr
Match: XP_008440737.1 (PREDICTED: HVA22-like protein a [Cucumis melo] >KAA0036071.1 HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98878.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 355.1 bits (910), Expect = 3.3e-94 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MELO3C001971 vs. NCBI nr
Match: XP_038893618.1 (HVA22-like protein a [Benincasa hispida]) HSP 1 Score: 350.5 bits (898), Expect = 8.1e-93 Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MELO3C001971 vs. NCBI nr
Match: XP_004137404.1 (HVA22-like protein a [Cucumis sativus] >KGN63983.1 hypothetical protein Csa_013507 [Cucumis sativus]) HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92 Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of MELO3C001971 vs. NCBI nr
Match: XP_022137380.1 (HVA22-like protein a [Momordica charantia]) HSP 1 Score: 330.5 bits (846), Expect = 8.6e-87 Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 0
BLAST of MELO3C001971 vs. NCBI nr
Match: XP_022924017.1 (HVA22-like protein a [Cucurbita moschata]) HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84 Identity = 153/172 (88.95%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy TrEMBL
Match: A0A5D3BL17 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00740 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.6e-94 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy TrEMBL
Match: A0A1S3B2F5 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103485036 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.6e-94 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy TrEMBL
Match: A0A0A0LQD1 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G033020 PE=3 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 5.1e-93 Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy TrEMBL
Match: A0A6J1C6H3 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111008847 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.2e-87 Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 0
BLAST of MELO3C001971 vs. ExPASy TrEMBL
Match: A0A6J1E7Q1 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431566 PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.1e-85 Identity = 153/172 (88.95%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of MELO3C001971 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 219.2 bits (557), Expect = 2.6e-57 Identity = 102/172 (59.30%), Postives = 131/172 (76.16%), Query Frame = 0
BLAST of MELO3C001971 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 178.3 bits (451), Expect = 5.1e-45 Identity = 90/180 (50.00%), Postives = 124/180 (68.89%), Query Frame = 0
BLAST of MELO3C001971 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 169.9 bits (429), Expect = 1.8e-42 Identity = 80/147 (54.42%), Postives = 107/147 (72.79%), Query Frame = 0
BLAST of MELO3C001971 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 117.9 bits (294), Expect = 8.2e-27 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of MELO3C001971 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 102.4 bits (254), Expect = 3.6e-22 Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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