MELO3C001970 (gene) Melon (DHL92) v4

Overview


Name	MELO3C001970
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Microtubule-associated protein RP/EB
Location	chr12: 25719153 .. 25722343 (-)
RNA-Seq Expression	MELO3C001970
Synteny	MELO3C001970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAGAATGGTTAATGAAGATGGTAGTTTTGTTTTGTCCAACGCTAATTTGTTATGGGTGAGGAACAGTGAATTCCCTCCACCGTTCAATTTCACCTTCCGTTTCGAAACGATATGTTAAAAATCTTTTAAATGTTCTGTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTATAAAAAGATTAAAATTTTGTTTAAACTAAGCAGCGTTTCCCCCTTAATATCCGGCCATAAGCCGCCTCTTCCTTAATGCCGTCCTTCGTTTCCAGTTTATTTTAACATTTCTTTGTTCTTCCCTCTTTCTCCATTTTTTGTTTCTTTCCCCCTTCTTATGATTTGGGTTTTCTGGGAACTGCTTTTCAACTATGGCTTCCAATATTGGAATGATGGACAGTGCTTACTTTGTCGGTAGAAATGAAATTTTGACATGGATCAACAATTGCCTTCAACTGAATCTCTCTCGCATTGAAGAGGTTTTTATTTTTCAAAAATACCCTTTTTCTTCTTTTTGTTGTTTGGGAAATGTTTGTATTGTAATGTCAGATGTGAGTTTTTTTTTTCTGTTTGTGCATTTGAGTTTCTCTTCGGTCCCCTCTTTCCTTTTGGAGAAAGGGAGGTTGTGTTTTCTAATTTCTCCATCTTTTTCTTTGTGATTATTCATTGTTCATGATGGCGAAGTGTTATTACAGACATTGTTTTATAGAAATGTTCGGAAAAAAGGAATCAATGTTTGCTCTTACCTTGAAACATTTTCTAAGAATGTTGTTTAGTTGCTTTCTTTCAGGTTTTGGTTGAGGAAATAGAGGTTTCTAGGCAATGACAAACTATGTGATATGATAGTGATTTGGATTTTTCATAATGTTTTTGTGTTAAATCTCACATTATCCTTTTGCATCCTAGTCATTTTGGACCCAATTACTACTCAAGTTGAGGATTGACTAGTTCCTTGACAATTTGAAGCATGCCATACAAACAATGGAAGGCAAGCTGTTTTTTCTAATCTTAGTTTACAAATCTTAAAATCTATAGTAACTAGAAGTAGTTATGGGAATTGGATTATGTAATAGAAGTGAAAGCAAACTGTTTATGATATGTTCATACTGAGTTTATCCATTTGGACATGGGAGATTCTCTGAATAGCTTTCTCATATTATTGGGTCCAGCTTCATTTGTTCAACCCTGAAACGTTTTTTCCATTAGATGCAAGTCATTTGTTTGTTGTTAAGATATTGATTTCATTATTGGGTAAATTACTGTTGGAATTTTTTCCATCTATCCTGGTTTTCTTCTTGCTCTCTTTCCATCCACTATAAGTTATTTGGAGAGATTATTTATCTCAGTATGACGGTATCCCATTTCCCATGTTTGTTGTTCTGCCTAGGCTGCTTCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTTAGTTCTCTCTTATCCAGTTTCTTCTAGTTTCAATTTTCATCTGCTTTGGATTGGAGAATTGTTAATTGCTACTGTATGATGCTAACTTCTCTGCCTTGGATGCATGTAAAAGGTCAATTTTGATGCAAAAACTGAGTACGATATGATCCAGAATTACAAGGTTCTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGGTATGTAACCCAATGGTCTGCCTAAATCTCAGCATACGTAGTGAAGTGGATGGTGTTTTTTTAAAGCCTATTTCTCGTGATTGTTAGCTAGAAGGATGTTCGTTCCTTTAATGGTATACTGAAATCTCTGATGTTATATGTGACAGCACATTGAAGTCAACAGGCTTGTAAAAGGTAGACCTTTGGATAACTTGGAGTTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTTAATGGTGGCATAATGAATGAGTATGCTAAATTTATCATTGTTTATTTGGCTCTCGAGTATCGGATTATAAATAGTGTCTTATTTCGATTTTGTTATCAACTTTTTCTTGTATGTCATAACAGGAACTATAATCCCGTGGAGCGAAGATGTAAGGGCGGAAAAGGTGGGGCCACAATGAAGGGTTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATGCATAGCCACGGCTCTGGTGATTCAGTTGAACCAAGTAAAGCCTCTACACATCTTGTTGAATTAATTTGTTTTCGTTGAGAACAGCCATTGATTAAGCTATTTGATGCTGTATCAAACCAGGATCCAAGCCAGGGAAGAATGGCATAACGGGTGGGACAAATTCTTCGGCAGAAATCCAAGCTTTGTCCAAGGAGGTAGGATGCAAAATAATTTCTGCTTTATTCTTTGTTCTCAAGGACCGCTCCAGCTTTTGGCTTCCATTTCTCCTCCAATTGATGTTACATTTGACTCTCCCTCTTTCTTACAAGTTGTTGCTCTTTTTGTTGCATTTTTTTTCTTGTGCTCAGATTACTGAGCTGAAAATGTCCGTAGATCTTTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAATTGAGGGACATAGAAATCTTTTGTCAGATGCCTGAATTAGAAGATCTCCCGGTAAGAAATCCATGGATATAGGAAAAAACCTTCAGGATAATTGACTAGAAAACGATTCTCTGTCAGAACAATCAACTTTCAAGAGTACATCGATAATTGTATGGTTAATAATTGTACGTCTGATGCAGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCGAAGGAATCAGCACTAACTGAGGCTCAAGAGTACATATACCAGTCACAGAATAGGACTGACGTTGAAGATGAAAATGAAGAGTAAATTCGAAGTTTCAAACAACTTTGAGCTTGTAGATTGAACATGAAAAAGCTGGAGCATTGCCAAGCAATTCCACAGCTATCACTCATCATCATCCATCACTTAATGATCTCTAATGTATAGAATTCTTAGACTTAAATAATCCTTGTCTGCGCTGTGTACTAATGATCAAGATTGTTAACTGGATATCAACCGTTGGGGTTTTGTAATAACAACAGATGCTCAACATCAGCTTTCCTTAAATTCTTTTTCATTGTTTGAGAAAATGTTGCAAATTCTTATTAGTTGAGTAAACTATGATAAATGACTACACTTCTCTTCATGTTTATTTGAATTTGCTTTGATATTACAAAAAAAGGACAAAGAA

mRNA sequence

TAAAAGAATGGTTAATGAAGATGGTAGTTTTGTTTTGTCCAACGCTAATTTGTTATGGGTGAGGAACAGTGAATTCCCTCCACCGTTCAATTTCACCTTCCGTTTCGAAACGATATGTTAAAAATCTTTTAAATGTTCTGTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTATAAAAAGATTAAAATTTTGTTTAAACTAAGCAGCGTTTCCCCCTTAATATCCGGCCATAAGCCGCCTCTTCCTTAATGCCGTCCTTCGTTTCCAGTTTATTTTAACATTTCTTTGTTCTTCCCTCTTTCTCCATTTTTTGTTTCTTTCCCCCTTCTTATGATTTGGGTTTTCTGGGAACTGCTTTTCAACTATGGCTTCCAATATTGGAATGATGGACAGTGCTTACTTTGTCGGTAGAAATGAAATTTTGACATGGATCAACAATTGCCTTCAACTGAATCTCTCTCGCATTGAAGAGGTTTTGGTTGAGGAAATAGAGGCTGCTTCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTCAATTTTGATGCAAAAACTGAGTACGATATGATCCAGAATTACAAGGTTCTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGCACATTGAAGTCAACAGGCTTGTAAAAGGTAGACCTTTGGATAACTTGGAGTTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTTAATGGTGGCATAATGAATGAGAACTATAATCCCGTGGAGCGAAGATGTAAGGGCGGAAAAGGTGGGGCCACAATGAAGGGTTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATGCATAGCCACGGCTCTGGTGATTCAGTTGAACCAAGATCCAAGCCAGGGAAGAATGGCATAACGGGTGGGACAAATTCTTCGGCAGAAATCCAAGCTTTGTCCAAGGAGATTACTGAGCTGAAAATGTCCGTAGATCTTTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAATTGAGGGACATAGAAATCTTTTGTCAGATGCCTGAATTAGAAGATCTCCCGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCGAAGGAATCAGCACTAACTGAGGCTCAAGAGTACATATACCAGTCACAGAATAGGACTGACGTTGAAGATGAAAATGAAGAGTAAATTCGAAGTTTCAAACAACTTTGAGCTTGTAGATTGAACATGAAAAAGCTGGAGCATTGCCAAGCAATTCCACAGCTATCACTCATCATCATCCATCACTTAATGATCTCTAATGTATAGAATTCTTAGACTTAAATAATCCTTGTCTGCGCTGTGTACTAATGATCAAGATTGTTAACTGGATATCAACCGTTGGGGTTTTGTAATAACAACAGATGCTCAACATCAGCTTTCCTTAAATTCTTTTTCATTGTTTGAGAAAATGTTGCAAATTCTTATTAGTTGAGTAAACTATGATAAATGACTACACTTCTCTTCATGTTTATTTGAATTTGCTTTGATATTACAAAAAAAGGACAAAGAA

Coding sequence (CDS)

ATGGCTTCCAATATTGGAATGATGGACAGTGCTTACTTTGTCGGTAGAAATGAAATTTTGACATGGATCAACAATTGCCTTCAACTGAATCTCTCTCGCATTGAAGAGGTTTTGGTTGAGGAAATAGAGGCTGCTTCCGGGGCTGTGCAGTGTCAGATGATTGATATGACCTACCCAGGAGCTGTCCCAATGCATAAGGTCAATTTTGATGCAAAAACTGAGTACGATATGATCCAGAATTACAAGGTTCTTCAGGATGTATTCAATAAGTTGAAAATTGAAAAGCACATTGAAGTCAACAGGCTTGTAAAAGGTAGACCTTTGGATAACTTGGAGTTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTTAATGGTGGCATAATGAATGAGAACTATAATCCCGTGGAGCGAAGATGTAAGGGCGGAAAAGGTGGGGCCACAATGAAGGGTTGCCAGAAGGCTGCTAAATCACTGCAAACACATAATATGCATAGCCACGGCTCTGGTGATTCAGTTGAACCAAGATCCAAGCCAGGGAAGAATGGCATAACGGGTGGGACAAATTCTTCGGCAGAAATCCAAGCTTTGTCCAAGGAGATTACTGAGCTGAAAATGTCCGTAGATCTTTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAATTGAGGGACATAGAAATCTTTTGTCAGATGCCTGAATTAGAAGATCTCCCGATGGCAGCAGCAATCAAGATGATTTTGTATGCAGCAGACGCGAAGGAATCAGCACTAACTGAGGCTCAAGAGTACATATACCAGTCACAGAATAGGACTGACGTTGAAGATGAAAATGAAGAGTAA

Protein sequence

MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPGAVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE

Homology

[Close]

BLAST of MELO3C001970 vs. ExPASy Swiss-Prot
Match: Q9FJJ5 (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX=3702 GN=EB1B PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.2e-100
Identity = 193/281 (68.68%), Postives = 226/281 (80.43%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L LNLSRIE       EAASGAVQCQM+DMT+PG
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIE-------EAASGAVQCQMLDMTFPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
            VPMHKVNF+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGRPLDNLEFLQWLKR+
Sbjct: 61  VVPMHKVNFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRF 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPR--SK 180
           CDS+NGGIMNENYNPVERR +GG+   ++KG  K +KSLQT+NMH      S +P    +
Sbjct: 121 CDSINGGIMNENYNPVERRSRGGR-EKSVKGSSKISKSLQTNNMHHPPVATSNKPAGPKQ 180

Query: 181 PGKNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLP 240
              +GI GG+NSSAE+QALSKE+ +LK+SVDLLEKERDFYF+KLRDIEI CQ PEL+DLP
Sbjct: 181 AKSHGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLP 240

Query: 241 MAAAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           +  A+K ILYA DA ES L EAQE + QS      E+E +E
Sbjct: 241 IVVAVKKILYATDANESVLEEAQECLNQSLGLEGYEEEGKE 273

[Close]

BLAST of MELO3C001970 vs. ExPASy Swiss-Prot
Match: Q7XJ60 (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX=3702 GN=EB1A PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-97
Identity = 189/276 (68.48%), Postives = 216/276 (78.26%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L LNLSR+E       EAASGAVQCQM+DMT+PG
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVE-------EAASGAVQCQMLDMTFPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
            VPMHKVNFDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGRPLDNLEFLQWLKR+
Sbjct: 61  VVPMHKVNFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRF 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDS+NGGIMNENYNPVERR + GK   ++KG  K  KSLQT+N H   +  SV      G
Sbjct: 121 CDSINGGIMNENYNPVERRSRNGK-ERSVKGSNKIPKSLQTNNNHPPPNSSSVGLSKASG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
                  +  +AE+QALSKE+ +LK+S DLLEKERDFYF+KLRD+EI CQ PEL+DLP+ 
Sbjct: 181 PK-----SAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIV 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDE 277
            A+K ILYA DA ESAL +AQEY+ QS    D E E
Sbjct: 241 VAVKKILYATDANESALEDAQEYLNQSLGVEDDEAE 263

[Close]

BLAST of MELO3C001970 vs. ExPASy Swiss-Prot
Match: Q9FGQ6 (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX=3702 GN=EB1C PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.4e-74
Identity = 152/277 (54.87%), Postives = 191/277 (68.95%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQLNLS++E       EA SGAV CQ++D  +PG
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVE-------EACSGAVHCQLMDSVHPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
            VPMHKVNFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGRPLDNLEF+QW+K+Y
Sbjct: 61  TVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKY 120

Query: 121 CDSVNGGIMNENYNPVERR--CKGGK-----GGATMKGCQKAAKSLQTHNMHSHGSGDSV 180
           CDSVNGG    NY+ +ERR   KGGK       AT +  + ++ S       S+G+    
Sbjct: 121 CDSVNGG--QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHE 180

Query: 181 EPRSKPGKNGITGGTN---------SSAEIQALSKEITELKMSVDLLEKERDFYFAKLRD 240
              +  G +  + G +          S  + A  ++ITELK+ +D LEKERDFYF+KLRD
Sbjct: 181 PQSNNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRD 240

Query: 241 IEIFCQMPELEDLPMAAAIKMILYAADAKESALTEAQ 262
           +EI CQ P+ E LP+  +IK ILYAAD ++    E Q
Sbjct: 241 VEILCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

[Close]

BLAST of MELO3C001970 vs. ExPASy Swiss-Prot
Match: Q9UPY8 (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=MAPRE3 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.8e-37
Identity = 99/255 (38.82%), Postives = 146/255 (57.25%), Query Frame = 0


Query: 14  VGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPGAVPMHKVNFDAKT 73
           + R+++L W+N+ L LN ++IE++        SGA  CQ +DM +PG V + KV F AK 
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQL-------CSGAAYCQFMDMLFPGCVHLRKVKFQAKL 74

Query: 74  EYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENY 133
           E++ I N+KVLQ  F K+ ++K I V +LVKG+  DN EF+QW K++ D+   G   ++Y
Sbjct: 75  EHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDY 134

Query: 134 NPVERRCKGGKGGATMKGCQ---KAAKSLQT-----------HNMHSHGSGDSVEPRSKP 193
           NP+  R           G Q   K+ K + T            NM + G   +V P    
Sbjct: 135 NPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCIL 194

Query: 194 GKN---GITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELED 252
            KN      GG  + A+I  L++++ +LK++VD LEKERDFYF+KLRDIE+ CQ  E E+
Sbjct: 195 RKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESEN 254

[Close]

BLAST of MELO3C001970 vs. ExPASy Swiss-Prot
Match: Q6PER3 (Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN=Mapre3 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.7e-37
Identity = 99/255 (38.82%), Postives = 146/255 (57.25%), Query Frame = 0


Query: 14  VGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPGAVPMHKVNFDAKT 73
           + R+++L W+N+ L LN ++IE++        SGA  CQ +DM +PG V + KV F AK 
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQL-------CSGAAYCQFMDMLFPGCVHLRKVKFQAKL 74

Query: 74  EYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENY 133
           E++ I N+KVLQ  F K+ ++K I V +LVKG+  DN EF+QW K++ D+   G   ++Y
Sbjct: 75  EHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDY 134

Query: 134 NPVERRCKGGKGGATMKGCQ---KAAKSLQT-----------HNMHSHGSGDSVEPRSKP 193
           NP+  R           G Q   K+ K + T            NM + G   +V P    
Sbjct: 135 NPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCIL 194

Query: 194 GKN---GITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELED 252
            KN      GG  + A+I  L++++ +LK++VD LEKERDFYF+KLRDIE+ CQ  E E+
Sbjct: 195 RKNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESEN 254

[Close]

BLAST of MELO3C001970 vs. NCBI nr
Match: XP_008440447.1 (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo] >KAA0036070.1 microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo var. makuwa] >TYJ98877.1 microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 531.6 bits (1368), Expect = 4.2e-147
Identity = 272/279 (97.49%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE
Sbjct: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of MELO3C001970 vs. NCBI nr
Match: XP_004137403.1 (microtubule-associated protein RP/EB family member 1B [Cucumis sativus] >KAE8652504.1 hypothetical protein Csa_014080 [Cucumis sativus])

HSP 1 Score: 521.5 bits (1342), Expect = 4.3e-144
Identity = 266/279 (95.34%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNG+TGGTNSS EIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQM ELEDLPM 
Sbjct: 181 KNGVTGGTNSSTEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMT 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESALTEAQEYIYQSQNR+DVE+ENEE
Sbjct: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRSDVENENEE 272

[Close]

BLAST of MELO3C001970 vs. NCBI nr
Match: XP_038893617.1 (microtubule-associated protein RP/EB family member 1B-like [Benincasa hispida])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 262/279 (93.91%), Postives = 265/279 (94.98%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMH HGSGD VEPRSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHGHGSGDPVEPRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNG+T G NSS EIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQM ELEDLPMA
Sbjct: 181 KNGVTSGANSSGEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESALTEAQEYIYQSQ+R DV+DENEE
Sbjct: 241 AAIKMILYAADAKESALTEAQEYIYQSQSRNDVKDENEE 272

[Close]

BLAST of MELO3C001970 vs. NCBI nr
Match: XP_022924018.1 (microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 255/279 (91.40%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGG TMKGCQK AKSLQT+NMHS GSGD VE RSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNG TGG NSS EIQALSKEIT+LKMSVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNGATGGANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESAL EAQEYIYQS+ RTD EDENEE
Sbjct: 241 AAIKMILYAADAKESALAEAQEYIYQSK-RTDAEDENEE 271

[Close]

BLAST of MELO3C001970 vs. NCBI nr
Match: XP_023519542.1 (microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-135
Identity = 255/279 (91.40%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGG TMKGCQK AKSLQT+NMHS GSGD VE RSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGLTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNG TGG NSS EIQALSKEIT+LKMSVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNGATGGANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESAL EAQEYIYQS+ RTD EDENEE
Sbjct: 241 AAIKMILYAADAKESALAEAQEYIYQSK-RTDAEDENEE 271

[Close]

BLAST of MELO3C001970 vs. ExPASy TrEMBL
Match: A0A5D3BIC9 (Microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00730 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 272/279 (97.49%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE
Sbjct: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of MELO3C001970 vs. ExPASy TrEMBL
Match: A0A1S3B162 (microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484862 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 272/279 (97.49%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE
Sbjct: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of MELO3C001970 vs. ExPASy TrEMBL
Match: A0A6J1EB60 (microtubule-associated protein RP/EB family member 1B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431568 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 255/279 (91.40%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGG TMKGCQK AKSLQT+NMHS GSGD VE RSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNG TGG NSS EIQALSKEIT+LKMSVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNGATGGANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESAL EAQEYIYQS+ RTD EDENEE
Sbjct: 241 AAIKMILYAADAKESALAEAQEYIYQSK-RTDAEDENEE 271

[Close]

BLAST of MELO3C001970 vs. ExPASy TrEMBL
Match: A0A6J1KNF2 (microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495082 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.8e-135
Identity = 254/279 (91.04%), Postives = 259/279 (92.83%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKGGKGG TMKGCQK AKSLQT+NMHS GSGD VE RSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KN  TGG NSS EIQALSKEIT+LKMSVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMA
Sbjct: 181 KNSATGGANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESAL EAQEYIYQS+ RTD EDENEE
Sbjct: 241 AAIKMILYAADAKESALAEAQEYIYQSK-RTDAEDENEE 271

[Close]

BLAST of MELO3C001970 vs. ExPASy TrEMBL
Match: A0A6J1GCD6 (microtubule-associated protein RP/EB family member 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111452886 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 252/279 (90.32%), Postives = 259/279 (92.83%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE       EAASGAVQCQMIDMTYPG
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIE-------EAASGAVQCQMIDMTYPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
           AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRY
Sbjct: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRY 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDSVNGGIMNENYNPVERRCKG KGG  MKGCQKAAKSLQTHN+HS GS D VEPRSKPG
Sbjct: 121 CDSVNGGIMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
           KNG+T   +SS EIQALSKEITELK+SVDLLEKERDFYFAKLRDIEIFCQMPELE+LPMA
Sbjct: 181 KNGVTSRGHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMA 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           AAIKMILYAADAKESAL EAQEYIYQS+N T+VEDENEE
Sbjct: 241 AAIKMILYAADAKESALAEAQEYIYQSKNTTNVEDENEE 272

[Close]

BLAST of MELO3C001970 vs. TAIR 10
Match: AT5G62500.1 (end binding protein 1B )

HSP 1 Score: 365.5 bits (937), Expect = 3.7e-101
Identity = 193/281 (68.68%), Postives = 226/281 (80.43%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L LNLSRIE       EAASGAVQCQM+DMT+PG
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIE-------EAASGAVQCQMLDMTFPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
            VPMHKVNF+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGRPLDNLEFLQWLKR+
Sbjct: 61  VVPMHKVNFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRF 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPR--SK 180
           CDS+NGGIMNENYNPVERR +GG+   ++KG  K +KSLQT+NMH      S +P    +
Sbjct: 121 CDSINGGIMNENYNPVERRSRGGR-EKSVKGSSKISKSLQTNNMHHPPVATSNKPAGPKQ 180

Query: 181 PGKNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLP 240
              +GI GG+NSSAE+QALSKE+ +LK+SVDLLEKERDFYF+KLRDIEI CQ PEL+DLP
Sbjct: 181 AKSHGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLP 240

Query: 241 MAAAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDENEE 280
           +  A+K ILYA DA ES L EAQE + QS      E+E +E
Sbjct: 241 IVVAVKKILYATDANESVLEEAQECLNQSLGLEGYEEEGKE 273

[Close]

BLAST of MELO3C001970 vs. TAIR 10
Match: AT3G47690.1 (microtubule end binding protein EB1A )

HSP 1 Score: 357.5 bits (916), Expect = 1.0e-98
Identity = 189/276 (68.48%), Postives = 216/276 (78.26%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L LNLSR+E       EAASGAVQCQM+DMT+PG
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVE-------EAASGAVQCQMLDMTFPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
            VPMHKVNFDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGRPLDNLEFLQWLKR+
Sbjct: 61  VVPMHKVNFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRF 120

Query: 121 CDSVNGGIMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPG 180
           CDS+NGGIMNENYNPVERR + GK   ++KG  K  KSLQT+N H   +  SV      G
Sbjct: 121 CDSINGGIMNENYNPVERRSRNGK-ERSVKGSNKIPKSLQTNNNHPPPNSSSVGLSKASG 180

Query: 181 KNGITGGTNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMA 240
                  +  +AE+QALSKE+ +LK+S DLLEKERDFYF+KLRD+EI CQ PEL+DLP+ 
Sbjct: 181 PK-----SAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIV 240

Query: 241 AAIKMILYAADAKESALTEAQEYIYQSQNRTDVEDE 277
            A+K ILYA DA ESAL +AQEY+ QS    D E E
Sbjct: 241 VAVKKILYATDANESALEDAQEYLNQSLGVEDDEAE 263

[Close]

BLAST of MELO3C001970 vs. TAIR 10
Match: AT5G67270.1 (end binding protein 1C )

HSP 1 Score: 278.9 bits (712), Expect = 4.6e-75
Identity = 152/277 (54.87%), Postives = 191/277 (68.95%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEVLVEEIEAASGAVQCQMIDMTYPG 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQLNLS++E       EA SGAV CQ++D  +PG
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVE-------EACSGAVHCQLMDSVHPG 60

Query: 61  AVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRY 120
            VPMHKVNFDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGRPLDNLEF+QW+K+Y
Sbjct: 61  TVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKY 120

Query: 121 CDSVNGGIMNENYNPVERR--CKGGK-----GGATMKGCQKAAKSLQTHNMHSHGSGDSV 180
           CDSVNGG    NY+ +ERR   KGGK       AT +  + ++ S       S+G+    
Sbjct: 121 CDSVNGG--QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHE 180

Query: 181 EPRSKPGKNGITGGTN---------SSAEIQALSKEITELKMSVDLLEKERDFYFAKLRD 240
              +  G +  + G +          S  + A  ++ITELK+ +D LEKERDFYF+KLRD
Sbjct: 181 PQSNNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRD 240

Query: 241 IEIFCQMPELEDLPMAAAIKMILYAADAKESALTEAQ 262
           +EI CQ P+ E LP+  +IK ILYAAD ++    E Q
Sbjct: 241 VEILCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

The following BLAST results are available for this feature:

BLAST of MELO3C001970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJJ5	5.2e-100	68.68	Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX...	[more]
Q7XJ60	1.4e-97	68.48	Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX...	[more]
Q9FGQ6	6.4e-74	54.87	Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX...	[more]
Q9UPY8	2.8e-37	38.82	Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=...	[more]
Q6PER3	3.7e-37	38.82	Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN...	[more]

BLAST of MELO3C001970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440447.1	4.2e-147	97.49	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cuc...	[more]
XP_004137403.1	4.3e-144	95.34	microtubule-associated protein RP/EB family member 1B [Cucumis sativus] >KAE8652...	[more]
XP_038893617.1	1.2e-141	93.91	microtubule-associated protein RP/EB family member 1B-like [Benincasa hispida]	[more]
XP_022924018.1	2.8e-135	91.40	microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita...	[more]
XP_023519542.1	2.8e-135	91.40	microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita...	[more]

BLAST of MELO3C001970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIC9	2.0e-147	97.49	Microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo...	[more]
A0A1S3B162	2.0e-147	97.49	microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo...	[more]
A0A6J1EB60	1.4e-135	91.40	microtubule-associated protein RP/EB family member 1B-like isoform X1 OS=Cucurbi...	[more]
A0A6J1KNF2	6.8e-135	91.04	microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucurbita ma...	[more]
A0A6J1GCD6	2.0e-134	90.32	microtubule-associated protein RP/EB family member 1B-like OS=Cucurbita moschata...	[more]

BLAST of MELO3C001970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62500.1	3.7e-101	68.68	end binding protein 1B	[more]
AT3G47690.1	1.0e-98	68.48	microtubule end binding protein EB1A	[more]
AT5G67270.1	4.6e-75	54.87	end binding protein 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 194..214
None	No IPR available	GENE3D	1.20.5.1430		coord: 186..271 e-value: 5.4E-23 score: 82.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..168
None	No IPR available	PANTHER	PTHR10623:SF29	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B	coord: 1..277
IPR036872	CH domain superfamily	GENE3D	1.10.418.10		coord: 6..141 e-value: 3.3E-50 score: 171.5
IPR036872	CH domain superfamily	SUPERFAMILY	47576	Calponin-homology domain, CH-domain	coord: 5..139
IPR004953	EB1, C-terminal	PFAM	PF03271	EB1	coord: 211..249 e-value: 5.3E-19 score: 68.2
IPR004953	EB1, C-terminal	PROSITE	PS51230	EB1_C	coord: 186..256 score: 15.432436
IPR001715	Calponin homology domain	PFAM	PF00307	CH	coord: 16..121 e-value: 2.5E-11 score: 43.7
IPR001715	Calponin homology domain	PROSITE	PS50021	CH	coord: 13..122 score: 18.422838
IPR027328	Microtubule-associated protein RP/EB	PANTHER	PTHR10623	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER	coord: 1..277
IPR036133	EB1, C-terminal domain superfamily	SUPERFAMILY	140612	EB1 dimerisation domain-like	coord: 193..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C001970.1	MELO3C001970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding