MELO3C001900 (gene) Melon (DHL92) v4

Overview
NameMELO3C001900
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 30720657 .. 30720839 (+)
RNA-Seq ExpressionMELO3C001900
SyntenyMELO3C001900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGCCGACGTTGAACCGTCGGCGGAAGACACACGGTCAGCAGAAGACGGACGGTCGGCGGAAGTTCGTCCAACCACAGGCAGAAGAGAAATCGAATGTGGGCGATGGCAAATCGGGGCAGACAGCAAATTGGGGCGGAAGAATATCAGGCAGGAAGATAAACTGGGCGCAAGAAAATCGGAC

mRNA sequence

TTGGCCGACGTTGAACCGTCGGCGGAAGACACACGGTCAGCAGAAGACGGACGGTCGGCGGAAGTTCGTCCAACCACAGGCAGAAGAGAAATCGAATGTGGGCGATGGCAAATCGGGGCAGACAGCAAATTGGGGCGGAAGAATATCAGGCAGGAAGATAAACTGGGCGCAAGAAAATCGGAC

Coding sequence (CDS)

TTGGCCGACGTTGAACCGTCGGCGGAAGACACACGGTCAGCAGAAGACGGACGGTCGGCGGAAGTTCGTCCAACCACAGGCAGAAGAGAAATCGAATGTGGGCGATGGCAAATCGGGGCAGACAGCAAATTGGGGCGGAAGAATATCAGGCAGGAAGATAAACTGGGCGCAAGAAAATCGGAC

Protein sequence

LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKSD
Homology
BLAST of MELO3C001900 vs. NCBI nr
Match: ADN33692.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 120.6 bits (301), Expect = 4.9e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 60
          LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS
Sbjct: 29 LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 88

Query: 61 D 62
          D
Sbjct: 89 D 89

BLAST of MELO3C001900 vs. NCBI nr
Match: KAA0062972.1 (hypothetical protein E6C27_scaffold468G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 4.6e-22
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0

Query: 1  LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 60
          LADVEPSAEDTRSAEDGRSAEVRPT GRREIECGRWQI ADSKLG+KNIRQEDKLGARKS
Sbjct: 27 LADVEPSAEDTRSAEDGRSAEVRPTAGRREIECGRWQIEADSKLGQKNIRQEDKLGARKS 86

Query: 61 D 62
          D
Sbjct: 87 D 87

BLAST of MELO3C001900 vs. NCBI nr
Match: KAA0035797.1 (hypothetical protein E6C27_scaffold403G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-07
Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1  LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 60
          LA+++PS EDTRSAEDGRSAEV PT    +   G      D K GRKNI  +DKLGARKS
Sbjct: 25 LANIKPSVEDTRSAEDGRSAEVHPTVAEEKSNVG------DDKSGRKNIGPKDKLGARKS 79

Query: 61 D 62
          D
Sbjct: 85 D 79

BLAST of MELO3C001900 vs. NCBI nr
Match: TYK29820.1 (hypothetical protein E5676_scaffold208G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-05
Identity = 34/53 (64.15%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 9  EDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKSD 62
          EDTRSAEDGRSAEVRPT    +   G      D K GRKNI  +DKLGARKSD
Sbjct: 2  EDTRSAEDGRSAEVRPTVAEEKSNVG------DDKSGRKNIGPKDKLGARKSD 48

BLAST of MELO3C001900 vs. ExPASy TrEMBL
Match: E5GB50 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 60
          LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS
Sbjct: 29 LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 88

Query: 61 D 62
          D
Sbjct: 89 D 89

BLAST of MELO3C001900 vs. ExPASy TrEMBL
Match: A0A5A7V403 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00690 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-22
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0

Query: 1  LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 60
          LADVEPSAEDTRSAEDGRSAEVRPT GRREIECGRWQI ADSKLG+KNIRQEDKLGARKS
Sbjct: 27 LADVEPSAEDTRSAEDGRSAEVRPTAGRREIECGRWQIEADSKLGQKNIRQEDKLGARKS 86

Query: 61 D 62
          D
Sbjct: 87 D 87

BLAST of MELO3C001900 vs. ExPASy TrEMBL
Match: A0A5A7T2K1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00830 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07
Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 1  LADVEPSAEDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKS 60
          LA+++PS EDTRSAEDGRSAEV PT    +   G      D K GRKNI  +DKLGARKS
Sbjct: 25 LANIKPSVEDTRSAEDGRSAEVHPTVAEEKSNVG------DDKSGRKNIGPKDKLGARKS 79

Query: 61 D 62
          D
Sbjct: 85 D 79

BLAST of MELO3C001900 vs. ExPASy TrEMBL
Match: A0A5D3E2M6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00480 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-05
Identity = 34/53 (64.15%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 9  EDTRSAEDGRSAEVRPTTGRREIECGRWQIGADSKLGRKNIRQEDKLGARKSD 62
          EDTRSAEDGRSAEVRPT    +   G      D K GRKNI  +DKLGARKSD
Sbjct: 2  EDTRSAEDGRSAEVRPTVAEEKSNVG------DDKSGRKNIGPKDKLGARKSD 48

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
ADN33692.14.9e-24100.00hypothetical protein [Cucumis melo subsp. melo][more]
KAA0062972.14.6e-2295.08hypothetical protein E6C27_scaffold468G00690 [Cucumis melo var. makuwa][more]
KAA0035797.12.4e-0760.66hypothetical protein E6C27_scaffold403G00830 [Cucumis melo var. makuwa][more]
TYK29820.13.0e-0564.15hypothetical protein E5676_scaffold208G00480 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
E5GB502.4e-24100.00Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7V4032.2e-2295.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T2K11.2e-0760.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E2M61.4e-0564.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C001900.1MELO3C001900.1mRNA