MELO3C001462 (gene) Melon (DHL92) v4

Overview


Name	MELO3C001462
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Glutamate--glyoxylate aminotransferase 2
Location	chr10: 3575661 .. 3575826 (+)
RNA-Seq Expression	MELO3C001462
Synteny	MELO3C001462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAGATTTTGGTCCCGGTTCCGCAATACCCTCTTTACTCAGCTACTATTGCACTCTTTGGGGGCTCTCTTGTTCCATACTACCTAGAAGAGACTGCAAATTGGGGTCTTGACATTAATGATCTTCGCCAGTCAGTCGCGCAGGCTCGCTCCAAAGGAATTAATGT

mRNA sequence

ATCAGATTTTGGTCCCGGTTCCGCAATACCCTCTTTACTCAGCTACTATTGCACTCTTTGGGGGCTCTCTTGTTCCATACTACCTAGAAGAGACTGCAAATTGGGGTCTTGACATTAATGATCTTCGCCAGTCAGTCGCGCAGGCTCGCTCCAAAGGAATTAATGT

Coding sequence (CDS)

CAGATTTTGGTCCCGGTTCCGCAATACCCTCTTTACTCAGCTACTATTGCACTCTTTGGGGGCTCTCTTGTTCCATACTACCTAGAAGAGACTGCAAATTGGGGTCTTGACATTAATGATCTTCGCCAGTCAGTCGCGCAGGCTCGCTCCAAAGGAATTAAT

Protein sequence

QILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN

Homology

[Close]

BLAST of MELO3C001462 vs. NCBI nr
Match: KAA0034282.1 (glutamate--glyoxylate aminotransferase 2 [Cucumis melo var. makuwa] >TYK15637.1 glutamate--glyoxylate aminotransferase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 173 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 225

[Close]

BLAST of MELO3C001462 vs. NCBI nr
Match: XP_022984933.1 (glutamate--glyoxylate aminotransferase 2-like [Cucurbita maxima] >XP_022984941.1 glutamate--glyoxylate aminotransferase 2-like [Cucurbita maxima])

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. NCBI nr
Match: KAA0034234.1 (putative alanine aminotransferase [Cucumis melo var. makuwa] >TYK15686.1 putative alanine aminotransferase [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. NCBI nr
Match: XP_038892672.1 (glutamate--glyoxylate aminotransferase 2-like [Benincasa hispida] >XP_038892673.1 glutamate--glyoxylate aminotransferase 2-like [Benincasa hispida] >XP_038892675.1 glutamate--glyoxylate aminotransferase 2-like [Benincasa hispida])

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. NCBI nr
Match: XP_022957307.1 (glutamate--glyoxylate aminotransferase 2-like [Cucurbita moschata] >XP_022957308.1 glutamate--glyoxylate aminotransferase 2-like [Cucurbita moschata] >XP_022957309.1 glutamate--glyoxylate aminotransferase 2-like [Cucurbita moschata])

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. ExPASy Swiss-Prot
Match: Q9S7E9 (Glutamate--glyoxylate aminotransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GGAT2 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-19
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYLEE+ NWGLD+N+LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSQGI 209

[Close]

BLAST of MELO3C001462 vs. ExPASy Swiss-Prot
Match: Q9LR30 (Glutamate--glyoxylate aminotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GGAT1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.7e-18
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYL+E+ NWGLD+ +LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLDESENWGLDVANLRQSVAQARSQGI 209

[Close]

BLAST of MELO3C001462 vs. ExPASy Swiss-Prot
Match: Q9LDV4 (Alanine aminotransferase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALAAT2 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-15
Identity = 36/53 (67.92%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           IL P+PQYPLYSA+IAL GGSLVPYYL+E   WGL+I+DL++ + +ARSKGI+
Sbjct: 225 ILSPIPQYPLYSASIALHGGSLVPYYLDEATGWGLEISDLKKQLEEARSKGIS 277

[Close]

BLAST of MELO3C001462 vs. ExPASy Swiss-Prot
Match: P34106 (Alanine aminotransferase 2 OS=Panicum miliaceum OX=4540 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 8.5e-15
Identity = 35/53 (66.04%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           IL P+PQYPLYSA+IAL GG+LVPYYL+E   WGL+I+DL++ +  ARSKGI+
Sbjct: 167 ILCPIPQYPLYSASIALHGGTLVPYYLDEKTGWGLEISDLKKQLEDARSKGID 219

[Close]

BLAST of MELO3C001462 vs. ExPASy Swiss-Prot
Match: P52894 (Alanine aminotransferase 2 OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-14
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVP+PQYPLYSA+IAL GG+LVPYYL E+  WGL+ +D+++ +  ARS+GIN
Sbjct: 167 ILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGIN 219

[Close]

BLAST of MELO3C001462 vs. ExPASy TrEMBL
Match: A0A6J1JC11 (glutamate--glyoxylate aminotransferase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483054 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. ExPASy TrEMBL
Match: A0A6J1GYS3 (glutamate--glyoxylate aminotransferase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458746 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. ExPASy TrEMBL
Match: A0A5D3CZ18 (Putative alanine aminotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001840 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. ExPASy TrEMBL
Match: A0A5A7ST45 (Glutamate--glyoxylate aminotransferase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001340 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN
Sbjct: 173 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 225

[Close]

BLAST of MELO3C001462 vs. ExPASy TrEMBL
Match: A0A0A0KTK6 (Aminotran_1_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G598750 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGIN 55
           ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSV QARSKGIN
Sbjct: 158 ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVVQARSKGIN 210

[Close]

BLAST of MELO3C001462 vs. TAIR 10
Match: AT1G70580.1 (alanine-2-oxoglutarate aminotransferase 2 )

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-20
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYLEE+ NWGLD+N+LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSQGI 209

[Close]

BLAST of MELO3C001462 vs. TAIR 10
Match: AT1G70580.2 (alanine-2-oxoglutarate aminotransferase 2 )

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-20
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYLEE+ NWGLD+N+LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSQGI 209

[Close]

BLAST of MELO3C001462 vs. TAIR 10
Match: AT1G70580.3 (alanine-2-oxoglutarate aminotransferase 2 )

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-20
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYLEE+ NWGLD+N+LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSQGI 209

[Close]

BLAST of MELO3C001462 vs. TAIR 10
Match: AT1G70580.4 (alanine-2-oxoglutarate aminotransferase 2 )

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-20
Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYLEE+ NWGLD+N+LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSQGI 209

[Close]

BLAST of MELO3C001462 vs. TAIR 10
Match: AT1G23310.1 (glutamate:glyoxylate aminotransferase )

HSP 1 Score: 91.3 bits (225), Expect = 2.6e-19
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 2   ILVPVPQYPLYSATIALFGGSLVPYYLEETANWGLDINDLRQSVAQARSKGI 54
           ILVPVPQYPLYSATI+L GG+LVPYYL+E+ NWGLD+ +LRQSVAQARS+GI
Sbjct: 158 ILVPVPQYPLYSATISLLGGTLVPYYLDESENWGLDVANLRQSVAQARSQGI 209

The following BLAST results are available for this feature:

BLAST of MELO3C001462 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034282.1	7.6e-21	100.00	glutamate--glyoxylate aminotransferase 2 [Cucumis melo var. makuwa] >TYK15637.1 ...	[more]
XP_022984933.1	7.6e-21	100.00	glutamate--glyoxylate aminotransferase 2-like [Cucurbita maxima] >XP_022984941.1...	[more]
KAA0034234.1	7.6e-21	100.00	putative alanine aminotransferase [Cucumis melo var. makuwa] >TYK15686.1 putativ...	[more]
XP_038892672.1	7.6e-21	100.00	glutamate--glyoxylate aminotransferase 2-like [Benincasa hispida] >XP_038892673....	[more]
XP_022957307.1	7.6e-21	100.00	glutamate--glyoxylate aminotransferase 2-like [Cucurbita moschata] >XP_022957308...	[more]

BLAST of MELO3C001462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7E9	1.9e-19	84.62	Glutamate--glyoxylate aminotransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GGAT...	[more]
Q9LR30	3.7e-18	80.77	Glutamate--glyoxylate aminotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GGAT...	[more]
Q9LDV4	2.2e-15	67.92	Alanine aminotransferase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALA...	[more]
P34106	8.5e-15	66.04	Alanine aminotransferase 2 OS=Panicum miliaceum OX=4540 PE=1 SV=1	[more]
P52894	1.1e-14	64.15	Alanine aminotransferase 2 OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]

BLAST of MELO3C001462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JC11	3.7e-21	100.00	glutamate--glyoxylate aminotransferase 2-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1GYS3	3.7e-21	100.00	glutamate--glyoxylate aminotransferase 2-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3CZ18	3.7e-21	100.00	Putative alanine aminotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7ST45	3.7e-21	100.00	Glutamate--glyoxylate aminotransferase 2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KTK6	1.1e-20	98.11	Aminotran_1_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G5987...	[more]

BLAST of MELO3C001462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70580.1	1.4e-20	84.62	alanine-2-oxoglutarate aminotransferase 2	[more]
AT1G70580.2	1.4e-20	84.62	alanine-2-oxoglutarate aminotransferase 2	[more]
AT1G70580.3	1.4e-20	84.62	alanine-2-oxoglutarate aminotransferase 2	[more]
AT1G70580.4	1.4e-20	84.62	alanine-2-oxoglutarate aminotransferase 2	[more]
AT1G23310.1	2.6e-19	80.77	glutamate:glyoxylate aminotransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 2..54 e-value: 2.1E-16 score: 61.5
IPR004839	Aminotransferase, class I/classII	PFAM	PF00155	Aminotran_1_2	coord: 1..51 e-value: 4.5E-5 score: 22.8
None	No IPR available	PANTHER	PTHR11751:SF472	GLUTAMATE--GLYOXYLATE AMINOTRANSFERASE 1	coord: 2..53
IPR045088	Aminotransferase ALAT1/2-like	PANTHER	PTHR11751	ALANINE AMINOTRANSFERASE	coord: 2..53
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 2..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C001462.1	MELO3C001462.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity