MELO3C001348.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C001348.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Pol protein
Location	chr07: 24098167 .. 24104023 (-)
RNA-Seq Expression	MELO3C001348.jh1
Synteny	MELO3C001348.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGAAGATATGTTTTTTTTTAATCAAGACGATAAATAGTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTGTTATGGAAATTAGTGAGTTTTAGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGACGCTAGAATTTGAAGGGATATGACACAATTGAAATTTTAGAATGAAAACTCATGTCAAAATTTAACGAAAATTTAGTTGTTTATTTCTCCCAACTTATTGATCGTTTTCTTTTTATTTGTGTGTTAACTTCGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTATCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCACATATTTATTTATGTCTTACTGTAACGCCCCGAATTTTCGAGGTAAACTTTTACCGTTTTATATATGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACTCTGAGGGGTTCACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTATATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAAGTGGGCGAGCAAAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTACGCAGATGTGAGGCGGAAGGATCTCGAATTTGAGGTAGGGGACAAGGTGTTCCTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATGCTGAACAACCCGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGATGACATGAGGTCCCGTTATCCCGATCTGTTCGAGGAATAAAACTTTCGAGGACGAAAGTTCCCTAAGGAGGGAAGAATGTAACGCCCCGAATTTTCGAAGTAAACTTTTACCGTTTTATATAATTTTTCGGGAATGTTAAATCTTGGATTAATTTATGAAACTCTGAATTAATATTTGTAAATTTATATAATAATAATATAATAGTAATTATATTATTATTATTATTAGTATTTATTATTATCCTTATATATAATTTAATATTAATATTTTCTTTTATTATTATTATTATTAGTATTATTATTATTAATTAATTTTTAAAAGTTAATATATATATATGTATATAATAATATTTTATATATTTTTATTATTAGTTATAATAATTAAAAATTAATATATATATATATATAATAATATTCTATTTATTATTATTATTAAAAGTTATATATATATATATAATAATAAATTTTTTTTTTAAATTTAACCCTAAACCGCGCGGCTACCCCCCACCCTCAATCCATTTCGTTTCTCCTCCTTGCGCCGCCGCACCCCCCCTCGAGTTTTTCTTCTTCATTTTTCCCGACGGTCATCTCCTTCTTCTTCATTCTCTTCTCCATCCGACAGCGACGTCGCCTTCATCTCTCTTCCTCTGTCGTCGTCTCCGTCTCCGAAATCGAACAGCCGCCACGACCGTCCGTTTCGATCTCCTCTCGGGTTCACAACGCGCCCACCGGCGCCCTCCGTCGCCGTTCGCCGTGTGGAGCAAGGCCGTAGTCGAACGCTCCAGCCCGCCACGGCCGTCGGCGCTGAGAGCCGTCGCTCGTGTTGCCCGCTTGCGCTGCAAACCCGACCGGTTCCAAGCTGACCCGACCCAAAACCCGCTTCACCCGAGCCACACACGAATCCGGGCCGAGCCGAGTGATCCGAGTGAGTCGAGCCGAGTGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGAGCCGAGCCATAAGCCGAGCCGAGCCGAGGCCAAGCCGAGGTGGAGCCGAGCCGAGCCGAGCCGAACGCCTTCAAGCCGAGCCGAGCTCCTTGTTTCACCAAGCCACCTAAGCCTTCCTTCCTCCGCTCCGGGTCACGGTGAGTCTTCGGTAAGGATTGTTTTCGATGAATTCCCTAATGTTGCTACATCCGATTAGAGTTTGAATATTGGAATAAGATGTGGCCCTACTTTTCTCCCTTGAAGGTAGTACAGAGTTGACGCTTGAGTTCTCGGGTCTCGCGGTAGGCTTGTTTGGAGGTAGTTTTCCTTTCCTTGGGTAAGTCAACGGATGTCGCTTCTGACCTTTTAAAACGACTTCTACTAAAGTCATCAACTAAAACCTTCGTGTTTCGTTTAGGTGGATCTGTTGAGCGTGGATTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCTCGGATCGAGGCTGAAAACGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATAACTGTATGTGTGTTGACTGTTAAGCACTGTTATTATATTTTGTCTGATGTAAAGGTACTGTGACTGCTAATTGTAGATTGGGATTCTATATTGATGGACCTTGAAGTTACGGTTCAGTATGTAGTAATCATTGGTCTGGATGTTGATCATGGAGTTTGGACGGGGAAGGACAGAGAGTCCGGTTTTGGTTGGTTAGTTGATTGGGTCTAGGGTTTTCCCTAATGGTGTGCGAATTAGTGACGCGTATAGTAACTGAGGGTGTAATTGTTTAAACCTATACTATCTGACTGACAAAGCCTATGGCGGAACTGTAATATGAATGCCGTTGGGGTGTGACTGTTGTGGACGGTTTAGTATGGACTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATGTGTGCATCCTTCGGGAGCACTAGACTGATGTGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTGGACTGATATGTGCGTTCTACGGGACCACTAGACTGTTATGTAGGGCACCCCCGAATAGGAAGTTAACTGTTGTCCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTTTCTTCTTAACTTTCAGGTAAGGGCACGGCTAGGAGCAGACCGACGAGGGGCAGAAAGGATGCGTGAAGGCCATATGGACGTGTCTGATTTTATTTTCGCTTCCGCTGATGTATTTTGTCAGAATATCTGTTTTGGTGATTTTCTGTTGATAACTTACAAATTTTATTTGAAACCATTGTGAATTTTGGATTTGATGACTTGAGATTTTATTCAAAACTTTTGCAACTGTGTTTTTAAACAGGGCCCGATACCGTTTTGTTGTTATATTCCTAATGTTTTAAGAAATCGTAGCTGGTTCATTATAAACTTTGTGTTGTGTGGTCGAGTCGTAGTATTGAGTAATGACCTCAGCTTAGTCCGGAAAGTTGGGTCGTTACACTTACATTTAATTATTTTTAATCCTAATGTGTAGAAGAAATTTTGCGACAATATCACATTATTATTCAAATAAATAAAACAACAATAATTTTCCCCCTATGATCTCTAACAAAAATAATTGGCTTTCTTTTTCTCCCCTCCGAAGTCACTGCCTTCAAGAATTAATAACTTTATGAAATAATAATTAAAAAAAATGTATCATTATGGAAGACATCTCTTCAATAATATATTAGGATCAAAAGCTAAGAAAGGAATACAAGAAGATGGGTTATTGCAAGACATAGGACGACCAGAGGTCTGCCTGTATTTTAGATTGATTTTCATATTTTTGTTTTAAAAGTAATTCATTGAGAGATGATCTATACCAAAAATAGTTAATCAAATATTATAATCCTCTCTTTCTTGCTTTTGTTTTATGCTAATTCTTGGTATTAAGATTTATTGTTTGACGTATGTTGTTTAATTAGGTTTCAAATTTAAAGATACATACCCGAAATCGGGGTTTCTCTCTCTCCTTTTTAACGAAAGCCCCCTCTCCCCTTGCAATTTATAATTATGAATAAATACCCTATAACTCTCATACTTTGGCTTCTCTCTCATTTTCTTCCTACTAGGATATTGCATTATTATTCTTTGCCATCACTTGGTTGCAACCATAATCATTATCTCACTCAAATAAACTCATTCTTATAAACCTAGAGACTAAAAAAGTACACTTTCAAAATTCAGTAACCAAACATACATATTTTTCAGAACTTGAGATCAAAATGATCATTTTCCCTAAATAAAATCTAATAAAAGGAAGGAATCAATTTGAGACATCCAAGAGTAAATGCATATCAAATTAAATTAGTAAATAAAAAATAATTCAAAATATGAAAATGATGTTAAGAAGGTGAAAAGTAAATATTTATAAGTAAATTAATTTTCCATCACTTATTAACCACATTATGGAAAAGGCAAAAGGAATGTTTTCATCACTTATTTGTTCTTGAAATCATAAAATTAATATCAAGAACTTTGAGTTATATGTTTTAATTTTATTTTCTACATATTCTCCTTTGAGACATCATTTTTAGTCAACACAACCATTTTATTTGCAATCAAGGCCCATTCTTCCCAAACTTGTATTTAGAGGACAAACAAATATTCACCACTTGTTACAAATATGTATAGAGAGAGAAAAACCTAGTTTTCGCTCAATGATCTAAATTTAACAACTAAAATTGCTATAAAATGGTGTTCTCTCGCTTTCCTCATACGATCAACCCATAAGGAAAAAAATAGGCTTACTAA

mRNA sequence

ATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGACTGCCGAGGACTCTGAGGGGTTCACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTATATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAAGTGGGCGAGCAAAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTACGCAGATGTGAGGCGGAAGGATCTCGAATTTGAGGTAGGGGACAAGGTGTTCCTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATGCTGAACAACCCGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGATGACATGAGGTCCCCGACGTCGCCTTCATCTCTCTTCCTCTGTCGTCGTCTCCGTCTCCGAAATCGAACAGCCGCCACGACCGTCCGTTTCGATCTCCTCTCGGGTTCACAACGCGCCCACCGGCGCCCTCCGTCGCCGTTCGCCGTGTGGAGCAAGGCCGTAGTCGAACGCTCCAGCCCGCCACGGCCGTCGGCGCTGAGAGCCGTCGCTCGTGTTGCCCGCTTGCGCTGCAAACCCGACCGGTTCCAAGCTGACCCGACCCAAAACCCGCTTCACCCGAGCCACACACGAATCCGGGCCGAGCCGAGTGATCCGAGTGAGTCGAGCCGAGTGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGAGCCGAGCCATAAGCCGAGCCGAGCCGAGGCCAAGCCGAGGTGGAGCCGAGCCGAGCCGAGCCGAACGCCTTCAAGCCGAGCCGAGCTCCTTGTTTCACCAAGCCACCTAAGCCTTCCTTCCTCCGCTCCGGGTCACGGTGAGTCTTCGGTGGATCTGTTGAGCGTGGATTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCTCGGATCGAGGCTGAAAACGTAGTAATCCACAGGGGATTACACGTTAGTGACTATTGGGATTCTATATTGATGGACCTTGAAGTTACGGTTCAGTATGTAGTAATCATTGGTCTGGATGTTGATCATGGAGTTTGGACGGGGAAGGACAGAGAGTCCGGTTTTGGTTGGTTAGTTGATTGGGTAAGGGCACGGCTAGGAGCAGACCGACGAGGGGCAGAAAGGATGCGTGAAGGCCATATGGACGTGTCTGATTTTATTTTCGCTTCCGCTGATGCTTACTAA

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGACTGCCGAGGACTCTGAGGGGTTCACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTATATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAAGTGGGCGAGCAAAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTACGCAGATGTGAGGCGGAAGGATCTCGAATTTGAGGTAGGGGACAAGGTGTTCCTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATGCTGAACAACCCGTTGAGGTGCTTGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGATGACATGAGGTCCCCGACGTCGCCTTCATCTCTCTTCCTCTGTCGTCGTCTCCGTCTCCGAAATCGAACAGCCGCCACGACCGTCCGTTTCGATCTCCTCTCGGGTTCACAACGCGCCCACCGGCGCCCTCCGTCGCCGTTCGCCGTGTGGAGCAAGGCCGTAGTCGAACGCTCCAGCCCGCCACGGCCGTCGGCGCTGAGAGCCGTCGCTCGTGTTGCCCGCTTGCGCTGCAAACCCGACCGGTTCCAAGCTGACCCGACCCAAAACCCGCTTCACCCGAGCCACACACGAATCCGGGCCGAGCCGAGTGATCCGAGTGAGTCGAGCCGAGTGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGAGCCGAGCCATAAGCCGAGCCGAGCCGAGGCCAAGCCGAGGTGGAGCCGAGCCGAGCCGAGCCGAACGCCTTCAAGCCGAGCCGAGCTCCTTGTTTCACCAAGCCACCTAAGCCTTCCTTCCTCCGCTCCGGGTCACGGTGAGTCTTCGGTGGATCTGTTGAGCGTGGATTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCTCGGATCGAGGCTGAAAACGTAGTAATCCACAGGGGATTACACGTTAGTGACTATTGGGATTCTATATTGATGGACCTTGAAGTTACGGTTCAGTATGTAGTAATCATTGGTCTGGATGTTGATCATGGAGTTTGGACGGGGAAGGACAGAGAGTCCGGTTTTGGTTGGTTAGTTGATTGGGTAAGGGCACGGCTAGGAGCAGACCGACGAGGGGCAGAAAGGATGCGTGAAGGCCATATGGACGTGTCTGATTTTATTTTCGCTTCCGCTGATGCTTACTAA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDGANTSTAEDSEGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQRAHRRPPSPFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLHPSHTRIRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSRTPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENVVIHRGLHVSDYWDSILMDLEVTVQYVVIIGLDVDHGVWTGKDRESGFGWLVDWVRARLGADRRGAERMREGHMDVSDFIFASADAY

Homology

[Close]

BLAST of MELO3C001348.jh1 vs. NCBI nr
Match: KAA0062520.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 744 bits (1922), Expect = 4.16e-245
Identity = 431/675 (63.85%), Postives = 459/675 (68.00%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWV+VDRLTKSAHFVPGKSTYTASKWAQLYMS+IVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1348 GFTVIWVMVDRLTKSAHFVPGKSTYTASKWAQLYMSKIVRLHGVPVSIVSDRDARFTSKF 1407

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFST FHPQTDGQ ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1408 WKGLQTAMGTRLDFSTPFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1467

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFEALY KCC SPVCWGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQSR
Sbjct: 1468 NSYQATIGMAPFEALYSKCCISPVCWGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSR 1527

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRL
Sbjct: 1528 QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVRPFEILERIGPVAYRL 1587

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPV VLAREVK LRN+
Sbjct: 1588 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVGVLAREVKVLRNR 1647

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLC--------RRLRLRNRTAATTVR 439
            EIPLVK+LWRNHRVEEATWEREDDM + T   +L L          RLR RN TA   VR
Sbjct: 1648 EIPLVKILWRNHRVEEATWEREDDMSATTLLFNLLLLFRQRQHRLLRLRRRNLTAPAFVR 1707

Query: 440  FD-----LLSGSQRAHRR----PPSPFAVWSK----AVVERSSPPRPSALRAVARVARLR 499
             D      LS S+   RR    PP P          +   R +PP   A  +     R  
Sbjct: 1708 RDHPFPNSLSISRIGRRRASFIPPCPSTPCHSPPRGSEASRRTPPSHGAFPSSNAEDRCS 1767

Query: 500  CKPDRFQADPTQNPLHPSHTRIRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRA 559
              P RFQADPT++ +                                             
Sbjct: 1768 WSP-RFQADPTRDSIE-------------------------------------------- 1827

Query: 560  EAKPRWSRAEPSRTPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKG 619
                 W++   S  PS      ++        SA G    S   L VDSIEGHN+VSGKG
Sbjct: 1828 ----YWNKLW-SYLPSLEGIKELT---FKFSDSAAGLFGDSYPFLGVDSIEGHNQVSGKG 1887

Query: 620  FPTTGPRIEAENVVIHRGLHV----------SDYWDSILMDLEVTVQYVVIIGLDVDHGV 679
            FPTTGPRIEA NVVIHRGLHV          S         L+ T++YVV+IGLD+DHGV
Sbjct: 1888 FPTTGPRIEAGNVVIHRGLHVTRLLVVACVLSGIGILCRWTLKFTIRYVVVIGLDIDHGV 1947

Query: 680  WTGKDRESGFGW--------------------------LVDWVRARLGADRRGAERMREG 697
            W+GKD   G  W                          L+  VRA+ GADRR A R REG
Sbjct: 1948 WSGKD--DGLVWTEGSTRLICASFGSTRLICAFYGTTRLLCRVRAQRGADRREAGRTREG 1967

[Close]

BLAST of MELO3C001348.jh1 vs. NCBI nr
Match: KAA0062141.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 713 bits (1840), Expect = 8.18e-237
Identity = 400/622 (64.31%), Postives = 411/622 (66.08%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV VSIVSDRDARFTSKF
Sbjct: 1122 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVSVSIVSDRDARFTSKF 1181

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1182 WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1241

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1242 NSYQATIGMAPFETLYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1301

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL
Sbjct: 1302 QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 1361

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEN SY EQPVEVLAREVKTLRNK
Sbjct: 1362 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENFSYTEQPVEVLAREVKTLRNK 1421

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQ 439
            EIPLVKVLWRNHRVEEATWEREDDMRS                 R    T +F   SGS 
Sbjct: 1422 EIPLVKVLWRNHRVEEATWEREDDMRS-----------------RIKELTYKF---SGS- 1481

Query: 440  RAHRRPPSPFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLHPSHTR 499
                                                                        
Sbjct: 1482 ------------------------------------------------------------ 1541

Query: 500  IRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSRTPSSRAEL 559
                                                                        
Sbjct: 1542 ------------------------------------------------------------ 1572

Query: 560  LVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENVVIHRGLHV 619
                               +VD LSVDSIEGHN+VSGKGFPTTGPRIEA NVVIHRGLHV
Sbjct: 1602 -------------------AVDPLSVDSIEGHNQVSGKGFPTTGPRIEAGNVVIHRGLHV 1572

Query: 620  SDYWDS----------ILMDLEVTVQYVVIIGLDVDHGVWTGKDRESGFGWLVDWVRARL 679
             +   S          +L D      YVV+IGLD+DHGV  GK            VRA+ 
Sbjct: 1662 GNATASCSLCAIGCKELLADRPRCWMYVVVIGLDIDHGVGRGKT-----------VRAQR 1572

Query: 680  GADRRGAERMREGHMDVSDFIF 691
            GADRR A RMREGH+D S F++
Sbjct: 1722 GADRREAGRMREGHLDASGFLY 1572

[Close]

BLAST of MELO3C001348.jh1 vs. NCBI nr
Match: KAA0026230.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 700 bits (1806), Expect = 1.47e-231
Identity = 418/664 (62.95%), Postives = 442/664 (66.57%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRL KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 998  GFTVIWVVVDRLNKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1057

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQT MGTRLDFSTAFHPQTDG+TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1058 WKGLQTTMGTRLDFSTAFHPQTDGRTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1117

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1118 NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1177

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP+AYRL
Sbjct: 1178 QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPIAYRL 1237

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSML KYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK
Sbjct: 1238 ALPPSLSTVHDVFHVSMLTKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNK 1297

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQ 439
            EIPLVKVLWRNHRVEEATWEREDDM S             R     A         S S 
Sbjct: 1298 EIPLVKVLWRNHRVEEATWEREDDMMS-------------RYPELRATPPSAVPSPSSSS 1357

Query: 440  RAHRRPPS-----PFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLH 499
             A   PP      PFA  S      +S P    L   + V                  LH
Sbjct: 1358 PAFTPPPVFLFFLPFAHVS------TSAPVSDLLSVTSSVV-----------------LH 1417

Query: 500  PSHTRIRAE---PSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSR 559
              H R        + P+ES   + VS     +   ++   SH+PS     PR        
Sbjct: 1418 RPHERSLLHLTGRTSPTESHPTAAVS---DHLLLGSACTASHRPSL----PR-------- 1477

Query: 560  TPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENV 619
                            L S        +VD LSVDSIEGHNRVSGKGFPTT PRIEA NV
Sbjct: 1478 ----------------LYSVGRRISSINVDPLSVDSIEGHNRVSGKGFPTTRPRIEAGNV 1537

Query: 620  VIHRGLHV--------------------------------SDYWDSILMDLEVTVQYVVI 679
            VIHRGLHV                                + +  + L+        ++ 
Sbjct: 1538 VIHRGLHVMRLLVVACVLWGVRSCLRIDPDAGCSCTLRLCASFGSTRLICAPFGSTRLIG 1594

Query: 680  IGLDVDH--GVWTGKDRES----GFGWLVDWVRARLGADRRGAERMREGHMDVSDFIFAS 697
              L +    GV  G  R      G   L+  VR + GA RR A RMREGHMD S F++AS
Sbjct: 1598 ASLGITRLVGVSFGITRLICAFYGTARLLCRVRVQRGAVRREAGRMREGHMDASGFLYAS 1594

[Close]

BLAST of MELO3C001348.jh1 vs. NCBI nr
Match: KAA0047038.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 698 bits (1802), Expect = 3.84e-231
Identity = 396/660 (60.00%), Postives = 404/660 (61.21%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1107 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1166

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFSTAFHPQTDGQTER NQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1167 WKGLQTAMGTRLDFSTAFHPQTDGQTERRNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1226

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAI KIRSRMHTAQSR
Sbjct: 1227 NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSR 1286

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDK+FLKVAPMRGVLRFERRGKLSPRFVGPF+ILERIGPVAYRL
Sbjct: 1287 QKSYADVRRKDLEFEVGDKMFLKVAPMRGVLRFERRGKLSPRFVGPFKILERIGPVAYRL 1346

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK
Sbjct: 1347 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNK 1406

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQ 439
            EIPLV                                                       
Sbjct: 1407 EIPLV------------------------------------------------------- 1466

Query: 440  RAHRRPPSPFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLHPSHTR 499
                                                                        
Sbjct: 1467 ------------------------------------------------------------ 1526

Query: 500  IRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSRTPSSRAEL 559
                                                                        
Sbjct: 1527 ------------------------------------------------------------ 1570

Query: 560  LVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENVVIHRGLHV 619
                                 D LSVDSIEGHN+V GKGFPTTGPRIEA NVVIHRGLHV
Sbjct: 1587 ---------------------DPLSVDSIEGHNQVLGKGFPTTGPRIEAGNVVIHRGLHV 1570

Query: 620  SDYWDSILMDLEVTVQYVVIIGLDVDHGVWTGKDRESGFGW------------------- 679
            SDYWD ILMDLEVT+QYVVIIGLDVDHGVWTGKD ESGFG                    
Sbjct: 1647 SDYWDFILMDLEVTIQYVVIIGLDVDHGVWTGKDSESGFGCTRLICASFGSTRLMCASFG 1570

Query: 680  -----------------------LVDWVRARLGADRRGAERMREGHMDVSDFIFASADAY 697
                                   L+  VRA+ GADRR A RMREGHMD S F+ ASAD +
Sbjct: 1707 STRLICASFGSTRLICAFYGTTRLLCRVRAQRGADRREAGRMREGHMDSSGFLIASADVF 1570

[Close]

BLAST of MELO3C001348.jh1 vs. NCBI nr
Match: KAA0046049.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 694 bits (1791), Expect = 4.05e-231
Identity = 419/681 (61.53%), Postives = 451/681 (66.23%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRLTKSAHFVPGKST TASKW QLYMSEIVRLHGV VSIVSDRDARFTSKF
Sbjct: 815  GFTVIWVVVDRLTKSAHFVPGKSTNTASKWTQLYMSEIVRLHGVLVSIVSDRDARFTSKF 874

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 875  WKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 934

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NS+QATIGM PFEALYGKCCRSPVCWGEVGEQRLMGP+LVQSTNEAIQKIRSRMHTAQSR
Sbjct: 935  NSFQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPKLVQSTNEAIQKIRSRMHTAQSR 994

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEF+VG+KVFLKVAPMRGVLRFE+RGKLSPRFVG FEILERIGPVAYRL
Sbjct: 995  QKSYADVRRKDLEFDVGNKVFLKVAPMRGVLRFEKRGKLSPRFVGLFEILERIGPVAYRL 1054

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN+
Sbjct: 1055 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNR 1114

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMR-----SPTSPSSLFLCRRLRLRNRTAATTVRFDL 439
            EIPLVKVLWRNHRVEEATWEREDDM      SP S +S     R R   +       F  
Sbjct: 1115 EIPLVKVLWRNHRVEEATWEREDDMSRARVLSPPSSTSFSSSSRRRCNFQC------FLP 1174

Query: 440  LSGSQRAHRRPPSPFAVW--SKAVVERSS-------PPRPSALRAVARVARLRCKPDRFQ 499
            L  S     RP SP  +   S +VVE           PRP  + A A  A  R       
Sbjct: 1175 LRPSPDDCCRPSSPLLLRRISVSVVEVCQLQRFVRRGPRPFLISARAHDASNR------- 1234

Query: 500  ADPTQNPLHPSHTRIRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWS 559
                + PL  S   ++   S  +   R+  V      V R                    
Sbjct: 1235 ----RTPLLQSSAALKQGRSSNASKLRIIPV------VERR------------------- 1294

Query: 560  RAEPSRTPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPR 619
                       + L+V+P                VDLLSV+SIEGHN+VSGKGFPTTGPR
Sbjct: 1295 ----------NSSLVVAP----------------VDLLSVNSIEGHNQVSGKGFPTTGPR 1354

Query: 620  IEAENVVIHRGLHVSDYWDS---------------------ILMDLEVTVQYV--VIIGL 679
            IEA NVVIHRGLHVS+   S                       MD  VTV ++  V+   
Sbjct: 1355 IEAGNVVIHRGLHVSNVTASCSLCAIGYKELFTDRHRCRIRFSMDWGVTVSFICGVMYLT 1414

Query: 680  DVDHGVWT--GKDR------------ESGFGW------------LVDWVRARLGADRRGA 697
            D    +    G  R             + FG             L+  VR + GADRR A
Sbjct: 1415 DSTRLICASFGSTRLICASLGITRLIRASFGITRLICAFYVTTRLLCRVRVQRGADRREA 1427

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-37
Identity = 92/267 (34.46%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 77   DSEGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 136
            +S G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FT
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 137  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 196
            S+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

Query: 197  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHT 256
            +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T
Sbjct: 1117 SYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNT 1176

Query: 257  AQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP 316
               + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP
Sbjct: 1177 NNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGP 1236

Query: 317  VAYRLALPPSLSTV-HDVFHVSMLRKY 341
              Y L LP S+  +    FHVS L KY
Sbjct: 1237 NNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-37
Identity = 92/267 (34.46%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 77   DSEGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 136
            +S G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FT
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 137  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 196
            S+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

Query: 197  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHT 256
            +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T
Sbjct: 1117 SYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNT 1176

Query: 257  AQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP 316
               + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP
Sbjct: 1177 NNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGP 1236

Query: 317  VAYRLALPPSLSTV-HDVFHVSMLRKY 341
              Y L LP S+  +    FHVS L KY
Sbjct: 1237 NNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-37
Identity = 92/267 (34.46%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 77   DSEGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 136
            +S G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FT
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 137  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 196
            S+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

Query: 197  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHT 256
            +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T
Sbjct: 1117 SYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNT 1176

Query: 257  AQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP 316
               + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP
Sbjct: 1177 NNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGP 1236

Query: 317  VAYRLALPPSLSTV-HDVFHVSMLRKY 341
              Y L LP S+  +    FHVS L KY
Sbjct: 1237 NNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-37
Identity = 92/267 (34.46%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 77   DSEGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 136
            +S G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FT
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 137  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 196
            S+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

Query: 197  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHT 256
            +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T
Sbjct: 1117 SYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNT 1176

Query: 257  AQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP 316
               + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP
Sbjct: 1177 NNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGP 1236

Query: 317  VAYRLALPPSLSTV-HDVFHVSMLRKY 341
              Y L LP S+  +    FHVS L KY
Sbjct: 1237 NNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-37
Identity = 92/267 (34.46%), Postives = 142/267 (53.18%), Query Frame = 0


Query: 77   DSEGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 136
            +S G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FT
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 137  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 196
            S+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

Query: 197  AYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHT 256
            +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T
Sbjct: 1117 SYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNT 1176

Query: 257  AQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP 316
               + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP
Sbjct: 1177 NNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGP 1236

Query: 317  VAYRLALPPSLSTV-HDVFHVSMLRKY 341
              Y L LP S+  +    FHVS L KY
Sbjct: 1237 NNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V5L6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7126G00110 PE=4 SV=1)

HSP 1 Score: 744 bits (1922), Expect = 2.01e-245
Identity = 431/675 (63.85%), Postives = 459/675 (68.00%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWV+VDRLTKSAHFVPGKSTYTASKWAQLYMS+IVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1348 GFTVIWVMVDRLTKSAHFVPGKSTYTASKWAQLYMSKIVRLHGVPVSIVSDRDARFTSKF 1407

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFST FHPQTDGQ ERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1408 WKGLQTAMGTRLDFSTPFHPQTDGQIERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1467

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFEALY KCC SPVCWGEVGEQRLMGPELVQSTNEAIQKIRS MHTAQSR
Sbjct: 1468 NSYQATIGMAPFEALYSKCCISPVCWGEVGEQRLMGPELVQSTNEAIQKIRSCMHTAQSR 1527

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILERIGPVAYRL
Sbjct: 1528 QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVRPFEILERIGPVAYRL 1587

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPV VLAREVK LRN+
Sbjct: 1588 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVGVLAREVKVLRNR 1647

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLC--------RRLRLRNRTAATTVR 439
            EIPLVK+LWRNHRVEEATWEREDDM + T   +L L          RLR RN TA   VR
Sbjct: 1648 EIPLVKILWRNHRVEEATWEREDDMSATTLLFNLLLLFRQRQHRLLRLRRRNLTAPAFVR 1707

Query: 440  FD-----LLSGSQRAHRR----PPSPFAVWSK----AVVERSSPPRPSALRAVARVARLR 499
             D      LS S+   RR    PP P          +   R +PP   A  +     R  
Sbjct: 1708 RDHPFPNSLSISRIGRRRASFIPPCPSTPCHSPPRGSEASRRTPPSHGAFPSSNAEDRCS 1767

Query: 500  CKPDRFQADPTQNPLHPSHTRIRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRA 559
              P RFQADPT++ +                                             
Sbjct: 1768 WSP-RFQADPTRDSIE-------------------------------------------- 1827

Query: 560  EAKPRWSRAEPSRTPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKG 619
                 W++   S  PS      ++        SA G    S   L VDSIEGHN+VSGKG
Sbjct: 1828 ----YWNKLW-SYLPSLEGIKELT---FKFSDSAAGLFGDSYPFLGVDSIEGHNQVSGKG 1887

Query: 620  FPTTGPRIEAENVVIHRGLHV----------SDYWDSILMDLEVTVQYVVIIGLDVDHGV 679
            FPTTGPRIEA NVVIHRGLHV          S         L+ T++YVV+IGLD+DHGV
Sbjct: 1888 FPTTGPRIEAGNVVIHRGLHVTRLLVVACVLSGIGILCRWTLKFTIRYVVVIGLDIDHGV 1947

Query: 680  WTGKDRESGFGW--------------------------LVDWVRARLGADRRGAERMREG 697
            W+GKD   G  W                          L+  VRA+ GADRR A R REG
Sbjct: 1948 WSGKD--DGLVWTEGSTRLICASFGSTRLICAFYGTTRLLCRVRAQRGADRREAGRTREG 1967

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V8X5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005070 PE=4 SV=1)

HSP 1 Score: 713 bits (1840), Expect = 3.96e-237
Identity = 400/622 (64.31%), Postives = 411/622 (66.08%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV VSIVSDRDARFTSKF
Sbjct: 1122 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVSVSIVSDRDARFTSKF 1181

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1182 WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1241

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFE LYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1242 NSYQATIGMAPFETLYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1301

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL
Sbjct: 1302 QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 1361

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDEN SY EQPVEVLAREVKTLRNK
Sbjct: 1362 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENFSYTEQPVEVLAREVKTLRNK 1421

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQ 439
            EIPLVKVLWRNHRVEEATWEREDDMRS                 R    T +F   SGS 
Sbjct: 1422 EIPLVKVLWRNHRVEEATWEREDDMRS-----------------RIKELTYKF---SGS- 1481

Query: 440  RAHRRPPSPFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLHPSHTR 499
                                                                        
Sbjct: 1482 ------------------------------------------------------------ 1541

Query: 500  IRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSRTPSSRAEL 559
                                                                        
Sbjct: 1542 ------------------------------------------------------------ 1572

Query: 560  LVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENVVIHRGLHV 619
                               +VD LSVDSIEGHN+VSGKGFPTTGPRIEA NVVIHRGLHV
Sbjct: 1602 -------------------AVDPLSVDSIEGHNQVSGKGFPTTGPRIEAGNVVIHRGLHV 1572

Query: 620  SDYWDS----------ILMDLEVTVQYVVIIGLDVDHGVWTGKDRESGFGWLVDWVRARL 679
             +   S          +L D      YVV+IGLD+DHGV  GK            VRA+ 
Sbjct: 1662 GNATASCSLCAIGCKELLADRPRCWMYVVVIGLDIDHGVGRGKT-----------VRAQR 1572

Query: 680  GADRRGAERMREGHMDVSDFIF 691
            GADRR A RMREGH+D S F++
Sbjct: 1722 GADRREAGRMREGHLDASGFLY 1572

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SJ52 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002110 PE=4 SV=1)

HSP 1 Score: 700 bits (1806), Expect = 7.12e-232
Identity = 418/664 (62.95%), Postives = 442/664 (66.57%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRL KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 998  GFTVIWVVVDRLNKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1057

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQT MGTRLDFSTAFHPQTDG+TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1058 WKGLQTTMGTRLDFSTAFHPQTDGRTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1117

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR
Sbjct: 1118 NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 1177

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP+AYRL
Sbjct: 1178 QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPIAYRL 1237

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSML KYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK
Sbjct: 1238 ALPPSLSTVHDVFHVSMLTKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNK 1297

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQ 439
            EIPLVKVLWRNHRVEEATWEREDDM S             R     A         S S 
Sbjct: 1298 EIPLVKVLWRNHRVEEATWEREDDMMS-------------RYPELRATPPSAVPSPSSSS 1357

Query: 440  RAHRRPPS-----PFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLH 499
             A   PP      PFA  S      +S P    L   + V                  LH
Sbjct: 1358 PAFTPPPVFLFFLPFAHVS------TSAPVSDLLSVTSSVV-----------------LH 1417

Query: 500  PSHTRIRAE---PSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSR 559
              H R        + P+ES   + VS     +   ++   SH+PS     PR        
Sbjct: 1418 RPHERSLLHLTGRTSPTESHPTAAVS---DHLLLGSACTASHRPSL----PR-------- 1477

Query: 560  TPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENV 619
                            L S        +VD LSVDSIEGHNRVSGKGFPTT PRIEA NV
Sbjct: 1478 ----------------LYSVGRRISSINVDPLSVDSIEGHNRVSGKGFPTTRPRIEAGNV 1537

Query: 620  VIHRGLHV--------------------------------SDYWDSILMDLEVTVQYVVI 679
            VIHRGLHV                                + +  + L+        ++ 
Sbjct: 1538 VIHRGLHVMRLLVVACVLWGVRSCLRIDPDAGCSCTLRLCASFGSTRLICAPFGSTRLIG 1594

Query: 680  IGLDVDH--GVWTGKDRES----GFGWLVDWVRARLGADRRGAERMREGHMDVSDFIFAS 697
              L +    GV  G  R      G   L+  VR + GA RR A RMREGHMD S F++AS
Sbjct: 1598 ASLGITRLVGVSFGITRLICAFYGTARLLCRVRVQRGAVRREAGRMREGHMDASGFLYAS 1594

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TVX7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00230 PE=4 SV=1)

HSP 1 Score: 698 bits (1802), Expect = 1.86e-231
Identity = 396/660 (60.00%), Postives = 404/660 (61.21%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1107 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1166

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFSTAFHPQTDGQTER NQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 1167 WKGLQTAMGTRLDFSTAFHPQTDGQTERRNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 1226

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAI KIRSRMHTAQSR
Sbjct: 1227 NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAILKIRSRMHTAQSR 1286

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEFEVGDK+FLKVAPMRGVLRFERRGKLSPRFVGPF+ILERIGPVAYRL
Sbjct: 1287 QKSYADVRRKDLEFEVGDKMFLKVAPMRGVLRFERRGKLSPRFVGPFKILERIGPVAYRL 1346

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK
Sbjct: 1347 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNK 1406

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMRSPTSPSSLFLCRRLRLRNRTAATTVRFDLLSGSQ 439
            EIPLV                                                       
Sbjct: 1407 EIPLV------------------------------------------------------- 1466

Query: 440  RAHRRPPSPFAVWSKAVVERSSPPRPSALRAVARVARLRCKPDRFQADPTQNPLHPSHTR 499
                                                                        
Sbjct: 1467 ------------------------------------------------------------ 1526

Query: 500  IRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWSRAEPSRTPSSRAEL 559
                                                                        
Sbjct: 1527 ------------------------------------------------------------ 1570

Query: 560  LVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPRIEAENVVIHRGLHV 619
                                 D LSVDSIEGHN+V GKGFPTTGPRIEA NVVIHRGLHV
Sbjct: 1587 ---------------------DPLSVDSIEGHNQVLGKGFPTTGPRIEAGNVVIHRGLHV 1570

Query: 620  SDYWDSILMDLEVTVQYVVIIGLDVDHGVWTGKDRESGFGW------------------- 679
            SDYWD ILMDLEVT+QYVVIIGLDVDHGVWTGKD ESGFG                    
Sbjct: 1647 SDYWDFILMDLEVTIQYVVIIGLDVDHGVWTGKDSESGFGCTRLICASFGSTRLMCASFG 1570

Query: 680  -----------------------LVDWVRARLGADRRGAERMREGHMDVSDFIFASADAY 697
                                   L+  VRA+ GADRR A RMREGHMD S F+ ASAD +
Sbjct: 1707 STRLICASFGSTRLICAFYGTTRLLCRVRAQRGADRREAGRMREGHMDSSGFLIASADVF 1570

[Close]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TXS2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006230 PE=4 SV=1)

HSP 1 Score: 694 bits (1791), Expect = 1.96e-231
Identity = 419/681 (61.53%), Postives = 451/681 (66.23%), Query Frame = 0


Query: 80   GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 139
            GFTVIWVVVDRLTKSAHFVPGKST TASKW QLYMSEIVRLHGV VSIVSDRDARFTSKF
Sbjct: 815  GFTVIWVVVDRLTKSAHFVPGKSTNTASKWTQLYMSEIVRLHGVLVSIVSDRDARFTSKF 874

Query: 140  WKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 199
            WKGLQTAMGTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN
Sbjct: 875  WKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYN 934

Query: 200  NSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSR 259
            NS+QATIGM PFEALYGKCCRSPVCWGEVGEQRLMGP+LVQSTNEAIQKIRSRMHTAQSR
Sbjct: 935  NSFQATIGMTPFEALYGKCCRSPVCWGEVGEQRLMGPKLVQSTNEAIQKIRSRMHTAQSR 994

Query: 260  QKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 319
            QKSYADVRRKDLEF+VG+KVFLKVAPMRGVLRFE+RGKLSPRFVG FEILERIGPVAYRL
Sbjct: 995  QKSYADVRRKDLEFDVGNKVFLKVAPMRGVLRFEKRGKLSPRFVGLFEILERIGPVAYRL 1054

Query: 320  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRNK 379
            ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN+
Sbjct: 1055 ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNR 1114

Query: 380  EIPLVKVLWRNHRVEEATWEREDDMR-----SPTSPSSLFLCRRLRLRNRTAATTVRFDL 439
            EIPLVKVLWRNHRVEEATWEREDDM      SP S +S     R R   +       F  
Sbjct: 1115 EIPLVKVLWRNHRVEEATWEREDDMSRARVLSPPSSTSFSSSSRRRCNFQC------FLP 1174

Query: 440  LSGSQRAHRRPPSPFAVW--SKAVVERSS-------PPRPSALRAVARVARLRCKPDRFQ 499
            L  S     RP SP  +   S +VVE           PRP  + A A  A  R       
Sbjct: 1175 LRPSPDDCCRPSSPLLLRRISVSVVEVCQLQRFVRRGPRPFLISARAHDASNR------- 1234

Query: 500  ADPTQNPLHPSHTRIRAEPSDPSESSRVSRVSRAASRVSRAASREPSHKPSRAEAKPRWS 559
                + PL  S   ++   S  +   R+  V      V R                    
Sbjct: 1235 ----RTPLLQSSAALKQGRSSNASKLRIIPV------VERR------------------- 1294

Query: 560  RAEPSRTPSSRAELLVSPSHLSLPSSAPGHGESSVDLLSVDSIEGHNRVSGKGFPTTGPR 619
                       + L+V+P                VDLLSV+SIEGHN+VSGKGFPTTGPR
Sbjct: 1295 ----------NSSLVVAP----------------VDLLSVNSIEGHNQVSGKGFPTTGPR 1354

Query: 620  IEAENVVIHRGLHVSDYWDS---------------------ILMDLEVTVQYV--VIIGL 679
            IEA NVVIHRGLHVS+   S                       MD  VTV ++  V+   
Sbjct: 1355 IEAGNVVIHRGLHVSNVTASCSLCAIGYKELFTDRHRCRIRFSMDWGVTVSFICGVMYLT 1414

Query: 680  DVDHGVWT--GKDR------------ESGFGW------------LVDWVRARLGADRRGA 697
            D    +    G  R             + FG             L+  VR + GADRR A
Sbjct: 1415 DSTRLICASFGSTRLICASLGITRLIRASFGITRLICAFYVTTRLLCRVRVQRGADRREA 1427

The following BLAST results are available for this feature:

BLAST of MELO3C001348.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062520.1	4.16e-245	63.85	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062141.1	8.18e-237	64.31	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026230.1	1.47e-231	62.95	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047038.1	3.84e-231	60.00	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046049.1	4.05e-231	61.53	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C001348.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	4.1e-37	34.46	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.1e-37	34.46	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.1e-37	34.46	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.1e-37	34.46	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	4.1e-37	34.46	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5L6	2.01e-245	63.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold71...	[more]
A0A5A7V8X5	3.96e-237	64.31	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005070 PE...	[more]
A0A5A7SJ52	7.12e-232	62.95	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002110 PE...	[more]
A0A5A7TVX7	1.86e-231	60.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7TXS2	1.96e-231	61.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24...	[more]

BLAST of MELO3C001348.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 69..260 e-value: 8.4E-40 score: 138.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..559
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..546
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 172..406
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 172..406
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 47..218 score: 17.378489
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 78..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C001348.jh1.t1	MELO3C001348.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding