MELO3C001348 (gene) Melon (DHL92) v4

Overview
NameMELO3C001348
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionMajor pollen allergen Ole e 6-like
Locationchr07: 23160529 .. 23161344 (-)
RNA-Seq ExpressionMELO3C001348
SyntenyMELO3C001348
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGGACACTGAGATTGAGATGAGATCTAAGTTGTTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGAAGATATGTTTTTTTTTTTTTAATCAAGACGATAAATAGTTTTTTTTTTTTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTGTTATGGAAATTAGTGAGTTTTAGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGACGCTAGAATTTGAAGGGATATGACACAATTGAAATTTTAGAATGAAAACTCATGTCAAAATTTAACGAAAATTTAGTTGTTTATTTCTCCCAACTTATTGATCGTTTTCTTTTTATTTGTGTGTTAACTTCGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTCTCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTT

mRNA sequence

CCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGGACACTGAGATTGAGATGAGATCTAAGTTGTTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTCTCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTT

Coding sequence (CDS)

ATGCATCGCAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGA

Protein sequence

MHRKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Homology
[Close]
BLAST of MELO3C001348 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 4  KDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 37
          KDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 67 KDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]
BLAST of MELO3C001348 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.4e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 4  KDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 37
          KDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 67 KDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

The following BLAST results are available for this feature:
BLAST of MELO3C001348 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0036015.11.5e-09100.00major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C001348 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C001348 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T3F97.4e-10100.00Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
BLAST of MELO3C001348 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C001348.1MELO3C001348.1mRNA