MELO3C000994 (gene) Melon (DHL92) v4

Overview
NameMELO3C000994
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionWall-associated receptor kinase 2-like
Locationchr08: 16794545 .. 16794724 (-)
RNA-Seq ExpressionMELO3C000994
SyntenyMELO3C000994
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTTCGGCAGAGGCGTTCTTCGACGTTTTTCGGTGCAAGGGTCGTGGGTCGACGACATTCTTTAAGTTCTTCGACGGAGGGGTCTTGGTTCTTCGAGTTCTTCGGCAGAGGAGTCGTGGGTCGACAACATTCTACAGCGGAGGGGTTATTCCGCGGAAGGGCTCTTTGCTAGAGGGGT

mRNA sequence

GTTCTTCGGCAGAGGCGTTCTTCGACGTTTTTCGGTGCAAGGGTCGTGGGTCGACGACATTCTTTAAGTTCTTCGACGGAGGGGTCTTGGTTCTTCGAGTTCTTCGGCAGAGGAGTCGTGGGTCGACAACATTCTACAGCGGAGGGGTTATTCCGCGGAAGGGCTCTTTGCTAGAGGGGT

Coding sequence (CDS)

TCTTCGGCAGAGGCGTTCTTCGACGTTTTTCGGTGCAAGGGTCGTGGGTCGACGACATTCTTTAAGTTCTTCGACGGAGGGGTCTTGGTTCTTCGAGTTCTTCGGCAGAGGAGTCGTGGGTCGACAACATTCTACAGCGGAGGGGTTATTCCGCGGAAGGGCTCTTTGCTAGAGGGG

Protein sequence

SSAEAFFDVFRCKGRGSTTFFKFFDGGVLVLRVLRQRSRGSTTFYSGGVIPRKGSLLEG
Homology
BLAST of MELO3C000994 vs. NCBI nr
Match: KAA0037543.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa] >TYK02018.1 wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 3.9e-18
Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  SSAEAFFDVFRCKGRGSTTFFKFFDGGVLVLRVLRQRSRGSTTFYSGGVIPRKGSLLEG 60
          SS E FFDVFR +G GSTTFFKFF GGV+VLRVLRQRSRGST FY GGVIPRKGSL EG
Sbjct: 8  SSVETFFDVFRRRGHGSTTFFKFFGGGVVVLRVLRQRSRGSTVFYRGGVIPRKGSLPEG 66

BLAST of MELO3C000994 vs. NCBI nr
Match: KAA0043423.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 6.4e-05
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0

Query: 1  SSAEAFFDVFRCKGRGSTTFFKFFDGGVLVLRVLRQRS 39
          S A+AF D+ RC+GRGSTTFF FFDG V+VL+VLR+ S
Sbjct: 24 SLAQAFSDILRCRGRGSTTFFVFFDGWVVVLQVLRRSS 61

BLAST of MELO3C000994 vs. ExPASy TrEMBL
Match: A0A5A7T3J3 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001350 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18
Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  SSAEAFFDVFRCKGRGSTTFFKFFDGGVLVLRVLRQRSRGSTTFYSGGVIPRKGSLLEG 60
          SS E FFDVFR +G GSTTFFKFF GGV+VLRVLRQRSRGST FY GGVIPRKGSL EG
Sbjct: 8  SSVETFFDVFRRRGHGSTTFFKFFGGGVVVLRVLRQRSRGSTVFYRGGVIPRKGSLPEG 66

BLAST of MELO3C000994 vs. ExPASy TrEMBL
Match: A0A5A7TJ26 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00310 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-05
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0

Query: 1  SSAEAFFDVFRCKGRGSTTFFKFFDGGVLVLRVLRQRS 39
          S A+AF D+ RC+GRGSTTFF FFDG V+VL+VLR+ S
Sbjct: 24 SLAQAFSDILRCRGRGSTTFFVFFDGWVVVLQVLRRSS 61

BLAST of MELO3C000994 vs. ExPASy TrEMBL
Match: A0A5D3E4P7 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001110 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.9e-04
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 1  SSAEAFFDVFRCKGRGSTTFFKFFDGGVLVLRVLRQRSRGSTTFYSGGVIPRKGSLLEG 60
          SSA+ FF+V R +GR ST FFKFF  GV+VLRVL+  S   +  +   V+ R+G   EG
Sbjct: 16 SSAKPFFNVLRRRGRESTAFFKFFSRGVVVLRVLQHSSTEES--WVDNVLRRRGPSSEG 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037543.13.9e-1883.05wall-associated receptor kinase 2-like [Cucumis melo var. makuwa] >TYK02018.1 wa... [more]
KAA0043423.16.4e-0568.42wall-associated receptor kinase 2-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T3J31.9e-1883.05Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7TJ263.1e-0568.42Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3E4P79.9e-0449.15Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C000994.1MELO3C000994.1mRNA