MELO3C000909 (gene) Melon (DHL92) v4

Overview
NameMELO3C000909
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionANK_REP_REGION domain-containing protein
Locationchr03: 23462272 .. 23462448 (-)
RNA-Seq ExpressionMELO3C000909
SyntenyMELO3C000909
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCGTGAAGTATTTAATCAACAACAATACAAAAATCCAAGTAAATGCAAAAACCTCAAATGGGTTAACAGCTCTTGACATCCTATCTCAAAGCCATAGAGATTTAAAGGACATGGACATTGCAGAGACTCTCACAGACGCCAAAGCCATCCGAACCACAAACAAAAAACTGCTGTCA

mRNA sequence

ACCGTGAAGTATTTAATCAACAACAATACAAAAATCCAAGTAAATGCAAAAACCTCAAATGGGTTAACAGCTCTTGACATCCTATCTCAAAGCCATAGAGATTTAAAGGACATGGACATTGCAGAGACTCTCACAGACGCCAAAGCCATCCGAACCACAAACAAAAAACTGCTGTCA

Coding sequence (CDS)

ACCGTGAAGTATTTAATCAACAACAATACAAAAATCCAAGTAAATGCAAAAACCTCAAATGGGTTAACAGCTCTTGACATCCTATCTCAAAGCCATAGAGATTTAAAGGACATGGACATTGCAGAGACTCTCACAGACGCCAAAGCCATCCGAACCACAAACAAAAAACTGCTGTCA

Protein sequence

TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Homology
BLAST of MELO3C000909 vs. NCBI nr
Match: TYK00735.1 (E3 ubiquitin-protein ligase mib1-like [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 60
           TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Sbjct: 199 TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 257

BLAST of MELO3C000909 vs. NCBI nr
Match: TYK00736.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 8.3e-21
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 60
           TVKYLINNN KIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Sbjct: 199 TVKYLINNNRKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 257

BLAST of MELO3C000909 vs. NCBI nr
Match: KAA0064716.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 8.3e-21
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 60
           TVKYLINNN KIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Sbjct: 199 TVKYLINNNRKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 257

BLAST of MELO3C000909 vs. NCBI nr
Match: XP_004144273.1 (ankyrin repeat-containing protein ITN1 [Cucumis sativus] >KGN47595.1 hypothetical protein Csa_018919 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKK 57
           TVKYLINNNTKIQVNAKTSNG TALDILSQSHRDLKDMDIAETLT AKA+RTTNKK
Sbjct: 199 TVKYLINNNTKIQVNAKTSNGFTALDILSQSHRDLKDMDIAETLTAAKAVRTTNKK 254

BLAST of MELO3C000909 vs. NCBI nr
Match: XP_022962092.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata])

HSP 1 Score: 83.6 bits (205), Expect = 6.4e-13
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 2   VKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKK 57
           V+YLI N+T+I+VNAKTSNGLTALDIL+QSHRDLKDMDIAETLT A AIRTT KK
Sbjct: 198 VEYLI-NHTRIKVNAKTSNGLTALDILTQSHRDLKDMDIAETLTAANAIRTTPKK 251

BLAST of MELO3C000909 vs. ExPASy TrEMBL
Match: A0A5D3BNN5 (E3 ubiquitin-protein ligase mib1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00250 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.1e-22
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 60
           TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Sbjct: 199 TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 257

BLAST of MELO3C000909 vs. ExPASy TrEMBL
Match: A0A5D3BR48 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00260 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 60
           TVKYLINNN KIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Sbjct: 199 TVKYLINNNRKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 257

BLAST of MELO3C000909 vs. ExPASy TrEMBL
Match: A0A5A7VEG8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00200 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 60
           TVKYLINNN KIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS
Sbjct: 199 TVKYLINNNRKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKKLLS 257

BLAST of MELO3C000909 vs. ExPASy TrEMBL
Match: A0A0A0KD35 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363020 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.4e-19
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0

Query: 1   TVKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKK 57
           TVKYLINNNTKIQVNAKTSNG TALDILSQSHRDLKDMDIAETLT AKA+RTTNKK
Sbjct: 199 TVKYLINNNTKIQVNAKTSNGFTALDILSQSHRDLKDMDIAETLTAAKAVRTTNKK 254

BLAST of MELO3C000909 vs. ExPASy TrEMBL
Match: A0A6J1HBT7 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC111462653 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-13
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 2   VKYLINNNTKIQVNAKTSNGLTALDILSQSHRDLKDMDIAETLTDAKAIRTTNKK 57
           V+YLI N+T+I+VNAKTSNGLTALDIL+QSHRDLKDMDIAETLT A AIRTT KK
Sbjct: 198 VEYLI-NHTRIKVNAKTSNGLTALDILTQSHRDLKDMDIAETLTAANAIRTTPKK 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK00735.11.7e-21100.00E3 ubiquitin-protein ligase mib1-like [Cucumis melo var. makuwa][more]
TYK00736.18.3e-2198.31ankyrin repeat-containing protein [Cucumis melo var. makuwa][more]
KAA0064716.18.3e-2198.31ankyrin repeat-containing protein [Cucumis melo var. makuwa][more]
XP_004144273.11.3e-1894.64ankyrin repeat-containing protein ITN1 [Cucumis sativus] >KGN47595.1 hypothetica... [more]
XP_022962092.16.4e-1383.64ankyrin repeat-containing protein ITN1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BNN58.1e-22100.00E3 ubiquitin-protein ligase mib1-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3BR484.0e-2198.31Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7VEG84.0e-2198.31Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0KD356.4e-1994.64ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363... [more]
A0A6J1HBT73.1e-1383.64ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..59
e-value: 3.7E-5
score: 25.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C000909.1MELO3C000909.1mRNA