Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGGTTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAAACTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAG
mRNA sequence
ATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGGTTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAAACTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAG
Coding sequence (CDS)
ATGAGTAATCCTATTCAAGAACACCCTTACGACCCTTTCCAATCCTTCTCCACTCTCTGTCTCAACAACTCCTCCTCCTCCTCCTCCTCCGCTGTCGACCCTTCACTCTGTTCTTCATGCTTCCGTCCTCACTCTCGCTCCACCGCCACTCCCATGAAACGCCCCTCCCCCACGCCCCCGTCTCAACAACCCTCCACCGCCCCCACTTCCAAGAACCTCCTTCTTGATCATCAACAACCCAATTCCATCCCTTTCTCCAAGATTAATCTCCCCATTCCTTTTCCTCCCTCTGTTTCCCCTCTCCGCCGCTCTCTTTCCGACCCCACCGATGCCTGCAATTTCTCCCCTCCTCCGCCGCATACTCAATCCCCGGCAAAACGGTTATGCCTAAACTCACCACTCCCTCCCCTGCCTCTCCGCCGTACTGTCTCTGACCCAAACCCAAACCCCGCCCCTGAAAAAACTTCCGATTCCCCAATTAAATTTCAGAAAGACAGCCCTGACTCGAAG
Protein sequence
MSNPIQEHPYDPFQSFSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMKRPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPIKFQKDSPDSK
Homology
BLAST of MELO3C000744 vs. NCBI nr
Match:
XP_011652649.2 (histone H3.v1 [Cucumis sativus] >KAE8651441.1 hypothetical protein Csa_001330 [Cucumis sativus])
HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 153/171 (89.47%), Postives = 155/171 (90.64%), Query Frame = 0
Query: 1 MSNPIQEHPYDPFQSFSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMKRPSPTPP 60
MSNPIQE PYDPFQSFSTLCLN SSSSSAVDPSLCSSCFRPHSRS+ATPMKRPSPTPP
Sbjct: 1 MSNPIQEQPYDPFQSFSTLCLN---SSSSSAVDPSLCSSCFRPHSRSSATPMKRPSPTPP 60
Query: 61 -SQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACNFSPPPP 120
SQQ ST TSKNLLLD QQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDA NFS PP
Sbjct: 61 SSQQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDARNFS-PPL 120
Query: 121 HTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPIKFQKDSPDSK 171
TQSPAKRLCLNSPLPPLPLRRTVSD PNPAPEKTSDSPIK QKDSP+SK
Sbjct: 121 QTQSPAKRLCLNSPLPPLPLRRTVSD--PNPAPEKTSDSPIKIQKDSPESK 165
BLAST of MELO3C000744 vs. NCBI nr
Match:
XP_038888901.1 (uncharacterized protein LOC120078676 [Benincasa hispida])
HSP 1 Score: 202.6 bits (514), Expect = 2.7e-48
Identity = 126/179 (70.39%), Postives = 135/179 (75.42%), Query Frame = 0
Query: 1 MSNPIQ--------EHPYDPFQS-FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATP 60
MSN IQ E P+DPF S FSTLCLN SAVDPSLCSSC R H RS ATP
Sbjct: 1 MSNLIQESSEPQNPEEPFDPFHSRFSTLCLN------PSAVDPSLCSSCARRHPRSAATP 60
Query: 61 MKRPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDA 120
MKRP+PTPP Q P SKNL LDHQQP+S FSKI+LPIPF PSV PLRRS+SDPT+A
Sbjct: 61 MKRPTPTPPQQHP-----SKNLFLDHQQPDS-TFSKIDLPIPFDPSVFPLRRSVSDPTEA 120
Query: 121 CNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPIKFQKDSPDSK 171
NFSP P QSPAKRLCLNSPLPPLPLRRTVSD PNP+PEKTSDSPIK KD+P+SK
Sbjct: 121 RNFSPTPV-IQSPAKRLCLNSPLPPLPLRRTVSD--PNPSPEKTSDSPIKIGKDNPESK 164
BLAST of MELO3C000744 vs. NCBI nr
Match:
XP_022995233.1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 124.8 bits (312), Expect = 7.2e-25
Identity = 100/190 (52.63%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q A T+K LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ E+TS+SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVND 177
BLAST of MELO3C000744 vs. NCBI nr
Match:
XP_022995232.1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 124.8 bits (312), Expect = 7.2e-25
Identity = 100/190 (52.63%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q A T+K LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ E+TS+SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVND 177
BLAST of MELO3C000744 vs. NCBI nr
Match:
XP_022930995.1 (uncharacterized protein LOC111437321 isoform X2 [Cucurbita moschata])
HSP 1 Score: 121.7 bits (304), Expect = 6.1e-24
Identity = 101/190 (53.16%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q TA T K+ LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT--QIQDPTATTKKH-LLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ +KTS SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSTDKTSVSPLTIGRVND 177
BLAST of MELO3C000744 vs. ExPASy TrEMBL
Match:
A0A0A0LI25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902250 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 5.1e-69
Identity = 153/171 (89.47%), Postives = 155/171 (90.64%), Query Frame = 0
Query: 1 MSNPIQEHPYDPFQSFSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMKRPSPTPP 60
MSNPIQE PYDPFQSFSTLCLN SSSSSAVDPSLCSSCFRPHSRS+ATPMKRPSPTPP
Sbjct: 1 MSNPIQEQPYDPFQSFSTLCLN---SSSSSAVDPSLCSSCFRPHSRSSATPMKRPSPTPP 60
Query: 61 -SQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDACNFSPPPP 120
SQQ ST TSKNLLLD QQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDA NFS PP
Sbjct: 61 SSQQLSTVTTSKNLLLDPQQPNSIPFSKINLPIPFPPSVSPLRRSLSDPTDARNFS-PPL 120
Query: 121 HTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPIKFQKDSPDSK 171
TQSPAKRLCLNSPLPPLPLRRTVSD PNPAPEKTSDSPIK QKDSP+SK
Sbjct: 121 QTQSPAKRLCLNSPLPPLPLRRTVSD--PNPAPEKTSDSPIKIQKDSPESK 165
BLAST of MELO3C000744 vs. ExPASy TrEMBL
Match:
A0A6J1K7B1 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490841 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.5e-25
Identity = 100/190 (52.63%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q A T+K LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ E+TS+SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVND 177
BLAST of MELO3C000744 vs. ExPASy TrEMBL
Match:
A0A6J1JY87 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490841 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.5e-25
Identity = 100/190 (52.63%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q A T+K LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT---QIQDPAATTKKHLLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ E+TS+SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSAERTSESPLTIGRVND 177
BLAST of MELO3C000744 vs. ExPASy TrEMBL
Match:
A0A6J1ET23 (proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437321 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 101/190 (53.16%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q TA T K+ LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT--QIQDPTATTKKH-LLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ +KTS SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSTDKTSVSPLTIGRVND 177
BLAST of MELO3C000744 vs. ExPASy TrEMBL
Match:
A0A6J1EYB4 (uncharacterized protein LOC111437321 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437321 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 101/190 (53.16%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MSNPIQE--HPYDPFQS-----FSTLCLNNSSSSSSSAVDPSLCSSCFRPHSRSTATPMK 60
MSN IQE P +P Q FSTLCLN + P LCSSC R R AT K
Sbjct: 1 MSNLIQESAEPQNPEQQHFDSRFSTLCLNPGGTHHRR---PPLCSSCGRRPPRCAATHKK 60
Query: 61 RPSPTPPSQQPSTAPTSKNLLLDHQQPNSIPFSKINLPIPFPPS------VSPLRRSLSD 120
R SPT Q TA T K+ LLD +Q N FSKI+LPIPF PS SPL RS+SD
Sbjct: 61 RRSPT--QIQDPTATTKKH-LLDPKQHNLTSFSKIDLPIPFGPSSAHPTPFSPLSRSVSD 120
Query: 121 PTDACNFSPPPPHTQSPAKRLCLNSPLPPLPLRRTVSDPNPNPAPEKTSDSPI------- 171
PT+A NFSPP SPAKRLC NS LPPLPLRRTVSD P P+ +KTS SP+
Sbjct: 121 PTEARNFSPP-----SPAKRLCPNSALPPLPLRRTVSD--PTPSTDKTSVSPLTIGRVND 177
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011652649.2 | 1.1e-68 | 89.47 | histone H3.v1 [Cucumis sativus] >KAE8651441.1 hypothetical protein Csa_001330 [C... | [more] |
| XP_038888901.1 | 2.7e-48 | 70.39 | uncharacterized protein LOC120078676 [Benincasa hispida] | [more] |
| XP_022995233.1 | 7.2e-25 | 52.63 | proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 [Cucurbita m... | [more] |
| XP_022995232.1 | 7.2e-25 | 52.63 | proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 [Cucurbita m... | [more] |
| XP_022930995.1 | 6.1e-24 | 53.16 | uncharacterized protein LOC111437321 isoform X2 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LI25 | 5.1e-69 | 89.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902250 PE=4 SV=1 | [more] |
| A0A6J1K7B1 | 3.5e-25 | 52.63 | proline-, glutamic acid- and leucine-rich protein 1-like isoform X2 OS=Cucurbita... | [more] |
| A0A6J1JY87 | 3.5e-25 | 52.63 | proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita... | [more] |
| A0A6J1ET23 | 2.9e-24 | 53.16 | proline-, glutamic acid- and leucine-rich protein 1-like isoform X1 OS=Cucurbita... | [more] |
| A0A6J1EYB4 | 2.9e-24 | 53.16 | uncharacterized protein LOC111437321 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
